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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG07575.1|AE004835_4 (AE004835) conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 303/303 (100%), Positives = 303/303 (100%)
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Sequence:
GTGAAATTCGAAGGTATCTATACCCCCGCCATCACCCCGCTGAGCGCCGACGGCAGCATCGACACCCAGGCC
TTCGCCGAGGTCCTGGAGTTTCTCGTCGAGTCGAAGGTGCACGGCATCGTGATCGGCGGCTCCACCGGCGAG
TACTACGCGCACACCGCCGAGGAACGCCTGGCCCTCGCCGCCCACGCCAGCGAAGTCATCGCCGGGCGCCTG
CCGCTGGTGGTGGGAACCGGCGCGATCCGCACCGAGGACTCGCTGGCCTACGCCGAAGCCGCCCGCGCCATC
GGCGCCGACGCCATCCTGGTCGGCTCGCCGCCCTACGCGCTGCCGACCTCGCGGGAGATCGCCGAGCACGTG
CTGGCGGTGGACCGCGCCGCCGGCCTGCCGATCATGCTCTACAACTATCCGGCGCGGATGGGCGTGGAGATG
GACGAGGCGTTCTTCGCCGCCGTCGCCGGCTGCCGCAACATCGTCGCGATCAAGGAAAGCTCCGGCTCCACC
GCGCAATTGCACCGCCTGGCCTGCCGCCACCCGCGGATCGCCTTGTCCTGCGGCTGGGACGACCAGGCCCTG
GAGTTCTTCGCCTGGGGCGCGCGCAGTTGGGTCTGCGCCGGCTCCAACTTCATCCCTGGCGAACACCTCGCC
CTGTACCAGGCCTGCGTGGTCGAGAACGACTTCGCCAAGGGCCGGCGCATCATGGCGGCGATGATGCCGCTG
ATGGACTTTCTCGAAAGCGGTCACTTCGTCCAGTCGATCAAGCACGGCTGCGAGCTGGCCGGCCTGCGCGCC
GGCGGCGTACGTGCGCCGCTGAAGGCGCTGGACGAGGCCGGCAAGGCGGCACTGGCGGAGATCGTCGCCAGG
CTCAAGGGCGAGGTCGCGCGGATCGTCGAGGGTGGCCGCCATGACTGA |
Translation:
MKFEGIYTPAITPLSADGSIDTQAFAEVLEFLVESKVHGIVIGGSTGEYYAHTAEERLALAAHASEVIAGRL
PLVVGTGAIRTEDSLAYAEAARAIGADAILVGSPPYALPTSREIAEHVLAVDRAAGLPIMLYNYPARMGVEM
DEAFFAAVAGCRNIVAIKESSGSTAQLHRLACRHPRIALSCGWDDQALEFFAWGARSWVCAGSNFIPGEHLA
LYQACVVENDFAKGRRIMAAMMPLMDFLESGHFVQSIKHGCELAGLRAGGVRAPLKALDEAGKAALAEIVAR
LKGEVARIVEGGRHD* |
AnnotationID:2495 | GeneID:2487 |
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Modification Date/Time: |
2005-06-06 19:07:41 |
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GeneProduct: | putative dihydrodipicolinate synthase |
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Cell Localization: | (1) Cytoplasmic |
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Cell Localization Confidence Code: | 3 |
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Functional Category: | (2) Amino acid biosynthesis and metabolism |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Pathway: | L-lysine biosynthesis via DAP pathway;
tetrahydrodipicolinate from L-aspartate: step 3. |
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Homology: | >emb|CAD15818.1| (AL646068) PROBABLE DIHYDRODIPICOLINATE SYNTHASE (DHDPS) PROTEIN
[Ralstonia solanacearum]
Length = 302
Score = 436 bits (1121), Expect = e-122
Identities = 220/301 (73%), Positives = 246/301 (81%), Gaps = 1/301 (0%)
>gb|AAL44762.1| (AE009326) dihydrodipicolinate synthase [Agrobacterium tumefaciens
str. C58 (U. Washington)]
Length = 303
Score = 428 bits (1101), Expect = e-119
Identities = 214/302 (70%), Positives = 241/302 (79%)
>gb|AAO56552.1| (AE016867) dihydrodipicolinate synthase, putative [Pseudomonas
syringae pv. tomato str. DC3000]
Length = 303
Score = 399 bits (1025), Expect = e-110
Identities = 191/302 (63%), Positives = 237/302 (78%) |
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Structural Features: | cd00408, DHDPS-like, Dihydrodipicolinate synthase family.
CD-Length = 281 residues, 100.0% aligned
Score = 257 bits (657), Expect = 1e-69
cd00950, DHDPS, Dihydrodipicolinate synthase (DHDPS) is a key enzyme
in lysine biosynthesis.
CD-Length = 284 residues, 100.0% aligned
Score = 213 bits (543), Expect = 3e-56
cd00954, NAL, N-Acetylneuraminic acid aldolase,
also called N-acetylneuraminate lyase (NAL)
CD-Length = 288 residues, 99.3% aligned
Score = 142 bits (359), Expect = 6e-35
cd00951, KDGDH, 5-dehydro-4-deoxyglucarate dehydratase, also called
5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of
dihydrodipicolinate synthase (DHDPS)
CD-Length = 289 residues, 100.0% aligned
Score = 114 bits (288), Expect = 1e-26
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