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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG04590.1|AE004550_6 (AE004550) probable transcriptional regulator [Pseudomonas aeruginosa PAO1]
Identities = 304/304 (100%), Positives = 304/304 (100%)
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Sequence:
ATGAGCCTGCGCCTTGAAGACATACAGGCCTTCCTCAACGTGGTCGAGCTGGGCAGCATCAGCGCCGCCGCC
GAACGCATGAGCCTGTCCAAGTCCGTGATCAGCAAACGCGTCAGCGACCTGGAGCGCCACCTCGGCGTGCGC
CTGCTCTACCGCTCGACGCGCAACGTCGAGCCGACCGAGGCCGGCGGCTTCTTCTACAAGTCGGCCAAGGCC
TCGCTGCAGGACCTGAACAACGCCGCGGAAAGCGTGGCCCTGCGCGAGAACGACCTGTGCGGGGAATTGCGG
GTGATGGCGCCGATGAGCTTCGGCACGCTCTGGCTGGGGCCGCTGGTGATGGAATTCATGGCGCGCAACCCG
CGCCTGGAAGTGGTCCTGCAACTGGACGACCGGATCGTCGACTTCGAGAAGGAAGGCTATGACCTGGCGATC
CGCATCACCCGCCTGCAGGACAGCTCGCTGATCGCCCGCCAACTGGGCACCAGCCGCCGGGTAGTGTGTTGC
AGCCCGGAATACCTGGAACGGCATGGCCCGCTGCAACGCATCGAAGACATTCTCTGCCATCCCTGCATCGGC
TACAGCCACAACACCCCGTCGCAGCTATGGAGCTTCGAGCCGCGGGTGGCCGGCGAGCCGGCGCGGATGATC
ACCCCGCGCGGACGCTTCAACACCAACAACGGCCAGACCATGCGCGACGCCGCGGTACGCGGCCTGGGCCTG
GCGATGCTGCCGCTGTTCATCGCCGCCGAAGACCTGGCCGCCGGCCGGCTGGTCGAGGCCCTGCCCCAGGAG
CGGCCGCTGGACGACCTGATCTACGCCATGTATTCGCGAGCGGCGACCCTCTCGCCGAAGGTGAAGCTGTTC
GTCCAGTTTCTCCAGCAGGCCCTGGGCAGCCCGCCGTGGGGCGTACGCTGA |
Translation:
MSLRLEDIQAFLNVVELGSISAAAERMSLSKSVISKRVSDLERHLGVRLLYRSTRNVEPTEAGGFFYKSAKA
SLQDLNNAAESVALRENDLCGELRVMAPMSFGTLWLGPLVMEFMARNPRLEVVLQLDDRIVDFEKEGYDLAI
RITRLQDSSLIARQLGTSRRVVCCSPEYLERHGPLQRIEDILCHPCIGYSHNTPSQLWSFEPRVAGEPARMI
TPRGRFNTNNGQTMRDAAVRGLGLAMLPLFIAAEDLAAGRLVEALPQERPLDDLIYAMYSRAATLSPKVKLF
VQFLQQALGSPPWGVR* |
AnnotationID:2489 | GeneID:2481 |
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Modification Date/Time: |
2005-02-21 19:07:53 |
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GeneProduct: | putative transcriptional regulator |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (25) Transcriptional regulators |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >emb|CAD85455.1| (BX321861) Bacterial regulatory protein, LysR family [Nitrosomonas
europaea ATCC 19718]
Length = 305
Score = 215 bits (548), Expect = 2e-55
Identities = 124/301 (41%), Positives = 176/301 (58%), Gaps = 7/301 (2%)
>dbj|BAC61559.1| (AP005084) putative transcription regulator protein [Vibrio
parahaemolyticus]
Length = 307
Score = 215 bits (548), Expect = 2e-55
Identities = 114/299 (38%), Positives = 176/299 (58%), Gaps = 5/299 (1%)
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Structural Features: | COG0583, LysR, Transcriptional regulator [Transcription]
CD-Length = 297 residues, 99.3% aligned
Score = 149 bits (376), Expect = 9e-37
Identities = 98/303 (32%), Positives = 144/303 (47%), Gaps = 13/303 (4%)
pfam03466, LysR_substrate, LysR substrate binding domain.
CD-Length = 209 residues, 97.6% aligned
Score = 122 bits (307), Expect = 1e-28
Identities = 68/208 (32%), Positives = 94/208 (45%), Gaps = 7/208 (3%) |
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