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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG03837.1|AE004482_4 (AE004482) probable transcriptional regulator [Pseudomonas aeruginosa PAO1]
Identities = 301/302 (99%), Positives = 302/302 (100%)
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Sequence:
ATGCGACGCAAGATCCCTTCCACCGCCGCGCTGGTCAGCTTCGAATCCGCCGCGCGCCACGAGAGCTTCACC
AAGGCGGCGGAGGAGTTGTCCCTGACCCAGAGCGCGATCTGCCGGCAGATCGCCACGCTCGAGGAGTTCCTC
GGTGTCGAGCTGTTCCGTCGCTCGCGGCGCGGGGTCAAGCTCACCGAGGCCGGGCTGTCCTATAGCCGGCGG
GTGGCGGTACGCCTCGACGCGGTGGAGCGCGACACCCTGGCGGTGATGGGGCACCAGGGCGGCGGCGCGATC
GAACTGGCGGTGGTGCCGACCTTCGGCACCCAATGGCTGTTGCCGCGGCTCAAGCGCTTCCAGCGGCTGCAC
CCGGAGGTCACGGTCAACCTGACCAACCGCACCCGCCCGTTCCTCTTCGCCGACACCGAGTTCGACGCCGCG
CTGTACTTCGGCGACGCCGACTGGTCGGGTACCGTCTCGCATTTCCTGATGCGCGAGAATCCGGTGCCGGTG
TGCAGCCCGGAGCTGCTGGGCGGGCGTCGAACGCTGAGCGCCGAGCAGGTCGCCGGGCTGCCGCTGATGCAG
CAGAGCACCCGGCCCTACGCTTGGCGCCAGTGGTTTCACTCCCAGGGACTGAACGTCGCCCACGACATGAGC
GGGCCGCGCTACGAGCTGTTCTCCATGCTTGCCCAGGCGGCCATGCACGGCATGGGCGTGGCCCTGATACCG
CCCTTCCTGATCCAGGACGAGCTGGCCGACGGAAGGCTTATCGTGCCCATGCAACATGCCTATTTGAGCGAG
AATGCGTATTACCTGATCATTCCCGAGCGCAGGGTCGAATCGGCGATGCTCAATGCCTTCCGCGACTGGCTG
GTGGAAGAGGCCAGGCAGTACCGCGAGGCCAACGGGCTGGGCTGA |
Translation:
MRRKIPSTAALVSFESAARHESFTKAAEELSLTQSAICRQIATLEEFLGVELFRRSRRGVKLTEAGLSYSRR
VAVRLDAVERDTLAVMGHQGGGAIELAVVPTFGTQWLLPRLKRFQRLHPEVTVNLTNRTRPFLFADTEFDAA
LYFGDADWSGTVSHFLMRENPVPVCSPELLGGRRTLSAEQVAGLPLMQQSTRPYAWRQWFHSQGLNVAHDMS
GPRYELFSMLAQAAMHGMGVALIPPFLIQDELADGRLIVPMQHAYLSENAYYLIIPERRVESAMLNAFRDWL
VEEARQYREANGLG* |
AnnotationID:2475 | GeneID:2467 |
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Modification Date/Time: |
2005-03-25 13:01:21 |
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GeneProduct: | putative transcriptional regulator, LysR family |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (25) Transcriptional regulators |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAN65790.1|AE016205_3 (AE016774) transcriptional regulator, LysR family [Pseudomonas
putida KT2440]
Length = 305
Score = 459 bits (1181), Expect = e-129
Identities = 228/300 (76%), Positives = 256/300 (85%)
>gb|AAO58882.1| (AE016875) transcriptional regulator, LysR family [Pseudomonas
syringae pv. tomato str. DC3000]
Length = 306
Score = 456 bits (1173), Expect = e-128
Identities = 228/295 (77%), Positives = 253/295 (85%)
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Structural Features: | COG0583, LysR, Transcriptional regulator [Transcription]
CD-Length = 297 residues, 100.0% aligned
Score = 137 bits (345), Expect = 1e-33
Identities = 84/300 (28%), Positives = 123/300 (41%), Gaps = 10/300 (3%)
pfam03466, LysR_substrate, LysR substrate binding domain.
CD-Length = 209 residues, 100.0% aligned
Score = 108 bits (271), Expect = 8e-25
Identities = 58/212 (27%), Positives = 82/212 (38%), Gaps = 10/212 (4%) |
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