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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG08748.1|AE004948_4 (AE004948) hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 298/299 (99%), Positives = 299/299 (100%)
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Sequence:
ATGCTAGGGCGCCTTCTCCTTCTCTGTGGCCTGTTCGCCGCGGCAGCTCCGGCTGCGGCCCTGACCATCTAC
AAGTACACCGACGCCAATGGCGTGGTGACCTACTCCGACCGCGCCGTGGCCGGGGCGCAGGTGTTCGTCTTC
CGCGACCGGATGGTCGAGCACCTGGAACGGGAAGTGAAGCTGGAGACGAAGAAGCACGCGGGTGGCGAGACC
CTGCAGGTGCGCAACGACCTCTACGCGCCGGTCGAGGTCGAGTTGCGGATCCGCAACCCGCGCAATGCCGTC
GGGGTGCCCGACGGGCCGATTCGCTGGGTGGTCCCGGCGCGCAGCCAGATGCGCCTGGCGACCCTGGCGCCG
CGCAAGGCCGGCAAGCCGATGAGCTACACGCCGAAGCTGCGCTATGCGCTCGGCGACCCGCGCCAGCAGCCG
CTGCTCTATCGCTATCCGCTGCCCTGGCGCGGCGGGCCGTTCCGCCTGTCCCAGGGCGCCAATGGCAAGTAC
AGCCACTTCACCCCCAAGGGCCGCTACGCGATGGACATCGCCATGCCCGAGGGCACGCCGATCATCGCCGCC
CGCGGCGGCACCGTGGTGAAGATCGAGAACAACCAGAGTGGGCGCGGCAACAATCCCTCGGGCAACTTCGTC
CGCATCCTGCACGACGACGGCACCATGGGCGTCTACCTGCACCTGATGCGCCACTCGGTGCTGGTCGCCGAG
GGCCAGCGGGTCCAGGTCGGCACGCCGCTGGCGCGCTCCGGCAACACCGGCAACAGCAGCGGGCCGCACCTG
CACTTCGTGATCCAGCGCAACGTCGGCCTGGCGCTGGAGTCGATTCCCTACGACTTCGCCCAGCCGGTCGAC
AGCCTGCCGAACTTCGCCATCGTCCGCGAGCCTTGA |
Translation:
MLGRLLLLCGLFAAAAPAAALTIYKYTDANGVVTYSDRAVAGAQVFVFRDRMVEHLEREVKLETKKHAGGET
LQVRNDLYAPVEVELRIRNPRNAVGVPDGPIRWVVPARSQMRLATLAPRKAGKPMSYTPKLRYALGDPRQQP
LLYRYPLPWRGGPFRLSQGANGKYSHFTPKGRYAMDIAMPEGTPIIAARGGTVVKIENNQSGRGNNPSGNFV
RILHDDGTMGVYLHLMRHSVLVAEGQRVQVGTPLARSGNTGNSSGPHLHFVIQRNVGLALESIPYDFAQPVD
SLPNFAIVREP* |
AnnotationID:2452 | GeneID:2444 |
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Modification Date/Time: |
2005-03-17 07:07:57 |
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GeneProduct: | putative peptidase |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (7) Cell wall / LPS / capsule |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | membrane proteins |
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Homology: | >gb|AAO58899.1| (AE016875) peptidase, M23/M37 family [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 268
Score = 352 bits (903), Expect = 2e-96
Identities = 174/265 (65%), Positives = 206/265 (77%), Gaps = 2/265 (0%)
>gb|AAN70888.1|AE016732_13 (AE016794) peptidase, M23/M37 family [Pseudomonas putida KT2440]
Length = 298
Score = 338 bits (866), Expect = 3e-92
Identities = 177/295 (60%), Positives = 215/295 (72%), Gaps = 4/295 (1%)
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Structural Features: | COG0739, NlpD, Membrane proteins related to metalloendopeptidases
[Cell envelope biogenesis, outer membrane]
CD-Length = 277 residues, 94.9% aligned
Score = 102 bits (255), Expect = 4e-23
Identities = 74/289 (25%), Positives = 108/289 (37%), Gaps = 26/289 (8%)
pfam01551, Peptidase_M37, Peptidase family M23/M37.
CD-Length = 83 residues, 98.8% aligned
Score = 76.8 bits (189), Expect = 3e-15
Identities = 41/91 (45%), Positives = 52/91 (57%), Gaps = 9/91 (9%) |
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