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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG06786.1|AE004761_2 (AE004761) probable transcriptional regulator [Pseudomonas aeruginosa PAO1]
Identities = 308/308 (100%), Positives = 308/308 (100%)
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Sequence:
ATGAAATTCACCCTCCGCCAGCTCGAGGTGTTCGTCGCCGTGGCCCAGCAGGAGAGCGTCTCCCGTGCCGCC
GAGGGGCTGTCGCTGTCGCAGTCGGCGACCAGCACCTCGCTCGGCGAGCTGGAGCGGCAGTTCGACTGCAAG
CTGTTCGACCGCGCCGGCAAGCGCCTGACCCTCAATGCCCTCGGCCGCCAACTGCTGCCGCAGGCGGTGGCG
CTGCTCGACCGCGGCGAGGAAATCGAGAACCTGCTCAACGGCAAGACCGCCTTCGGCTCCCTCGACCTCGGC
GCCACCCTGACCATCGGCAACTACCTGGCCACGCTGCTGATCGGCGCCTTCATGCAGCGCCAGCCGGACTGC
CGGGTGCGCCTGCACGTGCACAACACCGCCCAGGTGGTGCAGCAGGTCGCCCACTACGAGCTGGACCTGGGC
CTGATCGAGGGCGACTGCCGGCATCCGGACATCGAGGTGCAACCCTGGATGGAGGACGAACTGGTGGTGTTC
TGCGCCCCCCAGCATCCGCTGGCGCGGCGGGGCGGCGCCGATCTGGAACGGCTGACGCGGGAGGCCTGGATC
CTCCGCGAGCAGGGCTCCGGCACCCGCCTGACCTTCGACCAGGCCATGCGTCATCACCCGCGGCCGCTGAAC
ATCCGCCTGGAGCTGGAGCACACCGAGGCGATCAAGCGTGCCGTGGAGTCCGGCCTGGGCATCGGCTGCATT
TCCCGCCTGGCCCTGCGCGACGCTTTCCGCCGCGGCAGCCTGGTGCCGGTGGAAACGCCCGGCCTGGACCTG
CGCCGGCAGTTCTACTTCATCTGGCACAAGCAGAAGTACCAGACCGCGACCATGCGCGAGTTCCTCGACCTG
TGCCGCAGCGAGACCGCCGGGATCAGCCGCAGCGACGAGATCGTGCTGCCGCTGATTCCCTGA |
Translation:
MKFTLRQLEVFVAVAQQESVSRAAEGLSLSQSATSTSLGELERQFDCKLFDRAGKRLTLNALGRQLLPQAVA
LLDRGEEIENLLNGKTAFGSLDLGATLTIGNYLATLLIGAFMQRQPDCRVRLHVHNTAQVVQQVAHYELDLG
LIEGDCRHPDIEVQPWMEDELVVFCAPQHPLARRGGADLERLTREAWILREQGSGTRLTFDQAMRHHPRPLN
IRLELEHTEAIKRAVESGLGIGCISRLALRDAFRRGSLVPVETPGLDLRRQFYFIWHKQKYQTATMREFLDL
CRSETAGISRSDEIVLPLIP* |
AnnotationID:2383 | GeneID:2375 |
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Modification Date/Time: |
2005-04-18 09:09:39 |
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GeneProduct: | putative transcriptional regulator, LysR family |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (25) Transcriptional regulators |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAN67258.1|AE016352_11 (AE016780) transcriptional regulator, LysR family [Pseudomonas
putida KT2440]
Length = 308
Score = 497 bits (1279), Expect = e-140
Identities = 248/307 (80%), Positives = 276/307 (89%)
>emb|CAD14812.1| (AL646062) PROBABLE TRANSCRIPTIONAL REGULATORY DNA-BINDING
TRANSCRIPTION REGULATOR PROTEIN [Ralstonia solanacearum]
Length = 306
Score = 229 bits (585), Expect = 1e-59
Identities = 132/294 (44%), Positives = 178/294 (60%), Gaps = 4/294 (1%)
>gb|AAN81148.1|AE016763_107 (AE016763) Hypothetical transcriptional regulator yeiE [Escherichia
coli CFT073]
Length = 293
Score = 227 bits (578), Expect = 8e-59
Identities = 128/289 (44%), Positives = 173/289 (59%), Gaps = 3/289 (1%) |
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Structural Features: | pfam03466, LysR_substrate, LysR substrate binding domain.
CD-Length = 209 residues, 97.6% aligned
Score = 160 bits (405), Expect = 2e-40
Identities = 70/204 (34%), Positives = 100/204 (49%)
COG0583, LysR, Transcriptional regulator [Transcription]
CD-Length = 297 residues, 97.6% aligned
Score = 152 bits (384), Expect = 5e-38
Identities = 96/294 (32%), Positives = 137/294 (46%), Gaps = 8/294 (2%) |
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