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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG08773.1|AE004951_7 (AE004951) hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 312/312 (100%), Positives = 312/312 (100%)
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Sequence:
ATGAAGACGACGATTCGCCAGCTGGGCTGCGCCCTGCTGATCCTGGCCAGTGGCGCCGCCCTGGCCGCAGAA
CCCGAGCAGTGCCGTACGGTGCGCCTGGGCACGGTGAACTGGACCGACGTGGTCGCCAGCAGCGCCGTGGCC
GAAGCCTTGCTCGATGGCCTGGGCTACCAGGTGAAGCAGACCAGCGCCTCGCAACAGATCGTTTTGGCCGGC
CTGGCCGACAAGCAGCTGGACCTGTTCCTCGGCTACTGGCAACCGACCATGCAGCCGGTCGCCAGGCCTTAC
CTGGACAAAGGCCGGATCGAAGTGATCGAGCCACCGACCCTGGCCGACGCGCAGTCCACCTATGCGGTGCCG
AGCTACGTCGCCGAGGGCGGGCTGAAGACCTTCGCCGACATCGCCCGCTTCAAGGACAAGCTTGGCGGCCGC
ATCTACGCCATCGAGCCGGGCAGCGGCTCGAACCGCATCACCCGGAAGATGATCGACGACAACCGTTTCGGC
CTGAAGGGCTTCCAACTGGTGGAGTCCAGCGAGGCCGGGATGCTCACGGCGGTGAAGCGGGCGATCAAGCGC
AAGCAGTGGGTGGTGTTCTTCGGCTGGAAGCCGCATCCGATGAACCTGCAGATCGACATGACCTACCTCACC
GGCAGCGAGGATGTGTTCGGTCCCGACGAGGGCGCGGCCACCGTCTCCACCATGACCGCCGCCGGCTACCAG
GCGCAGTGCGGCAACGTCGCCCGGCTGCTGCACAACCTGCGCTTCAGCAGCGCCCAGGTCAGCCAGGTGATG
GCGCCGATCCTCGATCGCACCCAGCCCCTCGACGCCGCGCGCCAGTGGCTGAAGGCCAACCCCGAGCCGCTG
AAGGCCTGGCTGGATGGCGTGAGCACCTTCGACGGCAAGGACGGCCTGGCCGCGCTCCAGGCCTCGCTGAAG
TAA |
Translation:
MKTTIRQLGCALLILASGAALAAEPEQCRTVRLGTVNWTDVVASSAVAEALLDGLGYQVKQTSASQQIVLAG
LADKQLDLFLGYWQPTMQPVARPYLDKGRIEVIEPPTLADAQSTYAVPSYVAEGGLKTFADIARFKDKLGGR
IYAIEPGSGSNRITRKMIDDNRFGLKGFQLVESSEAGMLTAVKRAIKRKQWVVFFGWKPHPMNLQIDMTYLT
GSEDVFGPDEGAATVSTMTAAGYQAQCGNVARLLHNLRFSSAQVSQVMAPILDRTQPLDAARQWLKANPEPL
KAWLDGVSTFDGKDGLAALQASLK* |
AnnotationID:2350 | GeneID:2342 |
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Modification Date/Time: |
2005-03-17 09:09:33 |
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GeneProduct: | putative glycine betaine/L-proline ABC transporter, periplasmic substrate-binding protein |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (27) Transport of small molecules |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | amino acid transport and metabolism |
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Homology: | >gb|AAO54008.1| (AE016857) glycine betaine/L-proline ABC transporter, periplasmic
substrate-binding protein [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 315
Score = 287 bits (734), Expect = 6e-77
Identities = 148/296 (50%), Positives = 193/296 (65%), Gaps = 5/296 (1%)
>emb|CAC48796.1| (AL603643) putative glycine-betaine-binding protein [Sinorhizobium
meliloti]
Length = 312
Score = 286 bits (732), Expect = 1e-76
Identities = 140/301 (46%), Positives = 197/301 (65%), Gaps = 2/301 (0%)
>gb|AAL51622.1| (AE009487) GLYCINE BETAINE/L-PROLINE-BINDING PROTEIN PROX [Brucella
melitensis 16M]
Length = 326
Score = 285 bits (730), Expect = 2e-76
Identities = 144/292 (49%), Positives = 186/292 (63%), Gaps = 2/292 (0%)
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Structural Features: | COG2113, ProX, ABC-type proline/glycine betaine transport systems,
periplasmic components
[Amino acid transport and metabolism]
CD-Length = 302 residues, 96.0% aligned
Score = 298 bits (765), Expect = 4e-82
Identities = 123/291 (42%), Positives = 169/291 (58%), Gaps = 2/291 (0%)
pfam04069, OpuAC, Substrate binding domain of ABC-type
glycine betaine transport system.
CD-Length = 260 residues, 100.0% aligned
Score = 215 bits (550), Expect = 3e-57
Identities = 82/266 (30%), Positives = 135/266 (50%), Gaps = 7/266 (2%) |
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