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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG05983.1|AE004688_5 (AE004688) conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 317/318 (99%), Positives = 317/318 (99%)
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Sequence:
ATGCGTCAGaCCCTGAGCCTGTTCCTGCTTCTCTGCCTGCTCGTCGGCCAGGCCTGTGCCGACGAGCGCGTG
ACCCTGCGCCTGGCCGACCAGAAGGGCAACATGCGCGCCCAGTTGGAGGCTGCCGGCGCGCTGGACGACCTG
ACCTACGACATCCGCTGGTTCGAATTCCCCGCCGCCGCCGCCCTCGCCGAAGCACTCAATGCCGGTGCGGTG
GATGCCGGCATCATCGGCGACGCGCCATTGCTCTTCGCCCTGGCCGCCGGTGCCCGGCTGAAGGCCATCGCC
GTCGACAAATCCGATCCCTACGGTACCGCCGTGCTGGTGAGAGGGGATTCGCCGCTGCGCTCGGCCAACGAC
CTGAAAGGCCAGCGCATTGCCACCGGGCGCGGTTCCATCGGCCACTTCGTCGCGCTCAAGGCCTTGGCCTCG
GTCGGGCTGGGCGAGAAGGACGTCGAATTCCGCTTCCTCGGCCCGGTGGACGCGAAAATGGCCCTCGCCAAT
GGTTCCGTGGATGCCTGGGCGACCTGGGAGCCCTACACCGCGTTCGCGGAGACCGCCGACAAGGCTCGGGTA
CTGGTCGACGGTCGCGGCCTGTGGGCTGGCAACAGCTTCCTCGCTGCTACCGATAGCGCACTGGCCGACCCG
GCGAAACGCGCCGTGCTGCAGGACTACCTGCAACGCCTGGCCAGCGCCCAGCGCTGGGCGTACCTGCACCTG
GACGAGTATTCGCGAAGCCTGGCGCAGATCATCGGCTTCCCCGAGGACGCCGCGCGCTTGCAGTTCGAACGT
CGGCGCTTGCGTTGGCAGGCGCTGGATGAGCGAACGCTCGGCCAGCAGCAGGAGACCGCCGATTTCTACCAG
GCCCATGGATTGATTCCGCAGCGCCTCGATGTGCGGCCGACCTTCGCCAGCGGCTTTGCGGTCAGGCAGGCG
TCGGATGCGGATATCCGGTAG |
Translation:
MRQTLSLFLLLCLLVGQACADERVTLRLADQKGNMRAQLEAAGALDDLTYDIRWFEFPAAAALAEALNAGAV
DAGIIGDAPLLFALAAGARLKAIAVDKSDPYGTAVLVRGDSPLRSANDLKGQRIATGRGSIGHFVALKALAS
VGLGEKDVEFRFLGPVDAKMALANGSVDAWATWEPYTAFAETADKARVLVDGRGLWAGNSFLAATDSALADP
AKRAVLQDYLQRLASAQRWAYLHLDEYSRSLAQIIGFPEDAARLQFERRRLRWQALDERTLGQQQETADFYQ
AHGLIPQRLDVRPTFASGFAVRQASDADIR* |
AnnotationID:2336 | GeneID:2328 |
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Modification Date/Time: |
2005-03-07 10:10:58 |
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GeneProduct: | putative periplasmic aliphatic sulfonate-binding protein |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (27) Transport of small molecules |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAN68835.1|AE016516_5 (AE016786) periplasmic aliphatic sulfonate-binding protein,
putative [Pseudomonas putida KT2440]
Length = 321
Score = 444 bits (1142), Expect = e-124
Identities = 225/313 (71%), Positives = 260/313 (83%)
>gb|AAO55311.1| (AE016862) ABC transporter, periplasmic substrate-binding protein,
aliphatic sulfonates family [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 329
Score = 236 bits (602), Expect = 1e-61
Identities = 132/315 (41%), Positives = 195/315 (61%), Gaps = 4/315 (1%)
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Structural Features: | COG0715, TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems,
periplasmic components
[Inorganic ion transport and metabolism]
CD-Length = 335 residues, 96.7% aligned
Score = 153 bits (388), Expect = 2e-38
Identities = 114/324 (35%), Positives = 145/324 (44%), Gaps = 10/324 (3%)
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