Modification Date/Time: 2006-04-06 13:01:23
Missense Discrepancy: FALSE
Comments:Homology: gb|AAG07845.1| AE004860_1 (AE004860) conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 325/326 (99%), Positives = 326/326 (100%)
Sequence:
TTGAACATGAGCCAGAACCTCGATTTCATCCATTCCGCCCAGCGCACCATCGGCCTCGAGCGCGACGCGGTA
GACAGCCTGCTGGCGCGGATTGGCGACGATTTCGTCAAGGCCTGCGAACTGCTGCTGGCCGGCAAGGGCCGG
GTCGTCGTCGTCGGCATGGGCAAGTCCGGTCACATCGGCAAGAAGATCGCCGCTACCCTGGCCAGCACCGGC
ACCCCCTCCTTCTTCGTGCATCCGGCCGAGGCCAGCCACGGCGACATGGGCATGATCACCAAGGACGACGTG
GTCCTCGCCCTGTCCAACTCCGGCTCGACTGCCGAAATCGTCACCCTGTTGCCTCTGATCAAGCGCCTGGGC
ATCACCCTGATCAGCATGACCGGTAACCCCGAGTCGCCCCTGGCCAAGGCTGCGGAAGTGAACCTGGACGCC
AGTGTCGGCCAGGAAGCCTGTCCACTGAACCTGGCCCCGACCTCCTCCACCACCGTAACCCTGGTCCTCGGC
GACGCCCTGGCGATCGCCCTGCTCGAAGCCCGCGGCTTTACCGCGGAAGACTTCGCCTTCTCGCACCCGGGC
GGTGCGCTGGGCCGCCGACTGCTGCTGAAGGTGGAAGACGTCATGCACGTCGGCGAAGGGCTGCCGCAGGTG
CTGCTCGGCACCTCGCTGACCGGCGCGCTGATGGAAATGACCCGCAAGGGCCTGGGCATGACCGTAGTGCTC
GACGAACATGGCAAGCTTGCCGGCATTTTCACCGATGGCGACCTGCGTCGCGCCCTGGATCGGGGCATCGAC
GTCCGCCAGGTCACCATCGACCAGGTGATGACCGTCCACGGCAAAACCGTCCGCGCCGAGATTCTCGCCGCG
GAAGCCCTGAAGATCATGGAAGACAACAAGATCGGCGCACTGGTGGTGGTCGACGCGGACGACCGTCCGGTC
GGCGCCCTGAACATGCACGACCTGTTGCGCGCAGGAGTGATGTAA
Translation:
MNMSQNLDFIHSAQRTIGLERDAVDSLLARIGDDFVKACELLLAGKGRVVVVGMGKSGHIGKKIAATLASTG
TPSFFVHPAEASHGDMGMITKDDVVLALSNSGSTAEIVTLLPLIKRLGITLISMTGNPESPLAKAAEVNLDA
SVGQEACPLNLAPTSSTTVTLVLGDALAIALLEARGFTAEDFAFSHPGGALGRRLLLKVEDVMHVGEGLPQV
LLGTSLTGALMEMTRKGLGMTVVLDEHGKLAGIFTDGDLRRALDRGIDVRQVTIDQVMTVHGKTVRAEILAA
EALKIMEDNKIGALVVVDADDRPVGALNMHDLLRAGVM*
AnnotationID:2317 GeneID:2309
Modification Date/Time:
2005-05-19 22:10:52
GeneProduct: putative sugar isomerase
Cell Localization Confidence Code: 5
Functional Category: (5) Carbon compound catabolism
Alternate Gene Product Name:
Functional Category Confidence Code: 5
Secondary Functional Category(ies): cell envelope biogenesis
Homology: >gb|AAO57897.1| (AE016872) sugar isomerase, KpsF/GutQ [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 324
Score = 487 bits (1253), Expect = e-137
Identities = 246/324 (75%), Positives = 283/324 (87%)
>gb|AAO28513.1| (AE012555) polysialic acid capsule expression protein [Xylella
fastidiosa Temecula1]
Length = 333
Score = 390 bits (1001), Expect = e-108
Identities = 201/317 (63%), Positives = 245/317 (77%)
>dbj|BAB37499.1| (AP002564) putative isomerase [Escherichia coli O157:H7]
Length = 328
Score = 374 bits (960), Expect = e-103
Identities = 189/326 (57%), Positives = 244/326 (74%), Gaps = 1/326 (0%)
Structural Features: COG0794 , GutQ, Predicted sugar phosphate isomerase involved
in capsule formation
[Cell envelope biogenesis, outer membrane]
CD-Length = 202 residues, 100.0% aligned
Score = 249 bits (636), Expect = 1e-66
Identities = 121/202 (59%), Positives = 150/202 (74%), Gaps = 1/202 (0%)
pfam01380 , SIS, SIS domain.
CD-Length = 135 residues, 98.5% aligned
Score = 105 bits (264), Expect = 1e-23
Identities = 44/133 (33%), Positives = 68/133 (51%)
Comment: other possible gene name: kpsF