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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG06577.1|AE004742_13 (AE004742) probable permease of ABC sugar transporter [Pseudomonas aeruginosa PAO1]
Identities = 310/310 (100%), Positives = 310/310 (100%)
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Sequence:
ATGGCGACCAATTCCCCTGTCTATCCCACGGCTCCGGTAGCGCCTCGTCGCGTCTCGCCGCTCGATCGCCTG
CAAGGCTGGCTGCCGAAGCTGGTGCTGGCGCCAAGCGTGGTCGTGGTGCTGTTCTGCATGTATGGCTACATC
GGCTGGACGCTGCTGCTGTCCTTCACCAACTCGCGCTTCATGCCCAGCTACAAGTGGGCCGGGCTGAGCCAG
TACCAGCGCCTGTGGGACAACGACCGCTGGTGGGTGGCGAGCAAGAACCTGCTGCTCTTCGGCGGCTCGTTC
ATCGCCATCTGCCTGGTGCTCGGAGTGTTCCTCGCAGTGCTGCTGGACCAGCGCATCCGCCGCGAAGGCTTC
ATCCGTACCCTCTACCTGTATCCCATGGCGTTGTCGATGATCGTCACCGGCACCGCCTGGAAGTGGCTGCTC
AATCCGGGCCTGGGCCTGGACAAGCTGCTCCGCGACTGGGGCTGGGAAGGTTTCCGCTTCGACTGGCTGGTG
GACCCGGAGCGGGTCGTCTACTGCCTGGTGATCGCCGCCGTGTGGCAGGCCTCCGGCTTCGTCATGGCGCTG
TTCCTCGCCGGCCTGCGCGGGGTCGACCCGGCCATCGTGCGCGCCGCCCAGGTCGACGGTGCGAGCCTGCCG
ACCATCTACCTGCGCATCGTCCTGCCGAGCCTGCGCCCGGTGTTCTTCAGCGCGCTGATGATTCTCGCCCAT
ATCGCGATCAAGAGCTTCGACCTGGTAGCGGCGATGACCGCCGGCGGGCCGGGTTATTCCTCCGACCTGCCG
GCGATGTTCATGTATGCGCATACCTTCACCCGTGGCCAGATGGGGCTCGGCGCGGCGAGCGCGATGCTGATG
CTCGGCGCGGTACTGGCGATCGTGGTGCCTTACCTGTATTCCGAACTGCGAGGCAAGCGCCATGCGTGA |
Translation:
MATNSPVYPTAPVAPRRVSPLDRLQGWLPKLVLAPSVVVVLFCMYGYIGWTLLLSFTNSRFMPSYKWAGLSQ
YQRLWDNDRWWVASKNLLLFGGSFIAICLVLGVFLAVLLDQRIRREGFIRTLYLYPMALSMIVTGTAWKWLL
NPGLGLDKLLRDWGWEGFRFDWLVDPERVVYCLVIAAVWQASGFVMALFLAGLRGVDPAIVRAAQVDGASLP
TIYLRIVLPSLRPVFFSALMILAHIAIKSFDLVAAMTAGGPGYSSDLPAMFMYAHTFTRGQMGLGAASAMLM
LGAVLAIVVPYLYSELRGKRHA* |
AnnotationID:2298 | GeneID:2290 |
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Modification Date/Time: |
2006-02-03 16:04:08 |
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GeneProduct: | putative permease of ABC sugar transporter |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (27) Transport of small molecules |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | carbohydrate transport and metabolism |
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Homology: | >gb|AAN66641.1|AE016292_1 (AE016777) sugar ABC transporter, permease protein [Pseudomonas
putida KT2440]
Length = 302
Score = 516 bits (1328), Expect = e-146
Identities = 248/301 (82%), Positives = 274/301 (91%)
>gb|AAO54817.1| (AE016860) glucose ABC transporter, permease protein, putative
[Pseudomonas syringae pv. tomato str. DC3000]
Length = 302
Score = 505 bits (1301), Expect = e-142
Identities = 243/296 (82%), Positives = 269/296 (90%)
>gb|AAN33878.1|AE014564_10 (AE014564) sugar ABC transporter, permease protein, putative
[Brucella suis 1330]
Length = 349
Score = 372 bits (955), Expect = e-102
Identities = 170/285 (59%), Positives = 225/285 (78%) |
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Structural Features: | COG1175, UgpA, ABC-type sugar transport systems, permease components
[Carbohydrate transport and metabolism]
CD-Length = 295 residues, 98.6% aligned
Score = 212 bits (540), Expect = 5e-56
Identities = 112/292 (38%), Positives = 168/292 (57%), Gaps = 3/292 (1%) |
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