ViewGene

Locus Name:
GeneID:
Location:

GeneID:225
TrivialName: PA14_50830
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_50830
PAO1 Ortholog Locus:PA1046
Sequence Length:2274
Protein Length:757
Start: 4518256
Stop: 4515983
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG04435.1|AE004536_14 (AE004536) hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 743/757 (98%), Positives = 746/757 (98%)
Sequence:
ATGGAGTTAAGGAAAACAGGCTTCATGATCCGTTCGCGTTGGCATCTTCCCCTGCTTCTCGGCCTGCTCGCG
GTGGCCGCGCCGCTGGCGGCGAACGACACCCAGCAGGTGCTGTTCAACTTCGTCAAGCCGATGGCCGTGGTC
GGCATCACCCTGGAGGATGCCGACCTGCCCAGCGTGACGGCGGAGGCCACCCCGGAGGGCGACATTCTCCGT
CGCGTCACCTTCAGCCCGGCGCAACGGCCCACCTTGCGCATGAGTCCGGCGCAGGGCCGTTGGGACTGGTCC
GCAGCGGACTACGTGAGCCTGCGCATCCAGAACGCCATGAGCTGGGACATGACCCTGGAGGTCGCGATCGAG
GGCGAGCAGGGCGCGCCGGGGTTGCAGGCATCCATAGAGCTTCCGGCAGGCCCGCCGCAGACCCTGCTGGTG
CCGTTGCGGGCGGTTTCGCCAGAGGCTCTGGGCATGCGTGCGGGGCCGCCGATGCCGCAGATGGTCGAAGGC
CAGCGGATGCTGCTGGCGCCACGCGTGGAGGGCTCGCTGGACCGCGCCAGGGTCGGGGCGCTGAGCCTGTCC
CTGCGCTCGCCGCAAGCTCCCCAGAGCATCCTGCTCGGACGTTTCGGCATACGCGCAGGGAGGGCGGTGGAG
CGGAGCATCCTGACCGGCCTGATCGATCGTTATGGCCAGTACAGCCGCGCCGACTGGCCGGAAAAGATTCGT
TCCGACGAACAGTTGCGCAGCGCCTATGCGGCCGAGGCCGCACAGCTCCGCGACGGGGAACGGCAGACACCG
GCGCGCGACCGTTTCGGCGGCCTGCTGGGTGGGCCGGTGTTCGAAGCCAGCGGCTTCTTCCGCACGGAAAAA
CGTGGCGGGCGCTGGTGGCTGGTTACTCCGGAAGGACATCCGTTCTGGTCGCTGGGCGTTAATGCGGTGACC
GCCGACgGCGGCCGGACCTACGTCGAAGGACGCGAGCCGATGTTCGCCGAACTGCCGGCGGAGGGTGAGCCG
CTGGCCGCATTCTTCGGTGAGGGCGACGACCGCCGCGGCGTCGCCGCGCAGGCCGGGCGGCGTTTCGGGCAT
GGCCGCTGGTTCGATTTCCTCGGTGCCAATCGCCAGCGCATCGCTCCCCAGGCGAGCGCCGACCAGCTCGCC
GGCGAATGGCGCCAGCGCACTCTGGAGCGCCTCTCGGCATGGGGTTTCAACAGCCTCGGCAACTGGAGCGAT
CCGGCGCTCGCCGCACAGGCGCGGATGCCCTACAGCCTGCCGCTGTCGATCGCCGGCGACTACGCCACGGTC
AGCAGCGGTTTCGACTGGTGGGGAGCCATGCCCGATCCCTTCGACCCGCGCTTCGCCATGGCCGCCGAGCGC
GTCATCGCCATCGCTGCTCGCGACCACCGCGACGATCCCTGGCTGTTCGGCTACTACGCCGACAACGAACTG
GCCTGGGCCGGGCGCGACGGCTCGGCCCAGGCGCGCTACGGCCTCGCTTTCGGAGCCTTGAGGCTGTCCATG
GACAGTCCGGCGAAGCGCGCCTTCGTCAAGCAATTGAAAGCCAAGTACCTGCGCCATGAGGCATTGGCCCAG
GCCTGGGGCATCGAGCTGGCCGCCTGGGAGGCCCTGGAGGCGCCGGGCTACGCGGCTCCGCTGCCGGGCGAG
GGGCATCCGGCCATCGCCGAGGACTACAGCGCCTTCCTCCGGCTGTATGCCGACGCTTACTTCAAGACCCTG
CGCGACGCCCTGCAATGGCACGCACCGAACCACCTCCTGCTCGGCGGCCGCTTCGCCGTCAGCACTCCCGAG
GCGATCACCTCCTGCGCCCGGTATTGCGACCTGCTCAGTTTCAACCTCTATACGCCGTTGCCCGGGCAGGGC
CTGGACGACTCCCTGCTGGCGCGGCTGGACAAGCCGGTGCTGATCAGCGAGTTCCACTTCGGCTCGCGGGAT
CGCGGTCCGTTCTGGGGTGGCGTCAGCGAGGCGGCCAATGAGCGGGCGCGCGGCGACTCCTACCGAACGTTC
CTGGAGGCGGCGCTGAAGAGTCCGTATATCGTCGGCGCCCACTGGTTCCAGTACCTCGACCAACCGGCCAGC
GGGCGCCTGCTGGACGGCGAGAACGGTCATATTGGCCTGGTCGGGATCACGGGCTTGCCGTTCGCCGGTTTC
GTCGACACGGTGCGCCGAAGCAACCTTGCCGCCTTGTCGCGACTGTCGGCGATGGCCAGCTCCATGCCTGCC
GTCGAGCCTCCGCCGCCGCGCGAGGATTCAGCCGGTTCATGA
Translation:
MELRKTGFMIRSRWHLPLLLGLLAVAAPLAANDTQQVLFNFVKPMAVVGITLEDADLPSVTAEATPEGDILR
RVTFSPAQRPTLRMSPAQGRWDWSAADYVSLRIQNAMSWDMTLEVAIEGEQGAPGLQASIELPAGPPQTLLV
PLRAVSPEALGMRAGPPMPQMVEGQRMLLAPRVEGSLDRARVGALSLSLRSPQAPQSILLGRFGIRAGRAVE
RSILTGLIDRYGQYSRADWPEKIRSDEQLRSAYAAEAAQLRDGERQTPARDRFGGLLGGPVFEASGFFRTEK
RGGRWWLVTPEGHPFWSLGVNAVTADGGRTYVEGREPMFAELPAEGEPLAAFFGEGDDRRGVAAQAGRRFGH
GRWFDFLGANRQRIAPQASADQLAGEWRQRTLERLSAWGFNSLGNWSDPALAAQARMPYSLPLSIAGDYATV
SSGFDWWGAMPDPFDPRFAMAAERVIAIAARDHRDDPWLFGYYADNELAWAGRDGSAQARYGLAFGALRLSM
DSPAKRAFVKQLKAKYLRHEALAQAWGIELAAWEALEAPGYAAPLPGEGHPAIAEDYSAFLRLYADAYFKTL
RDALQWHAPNHLLLGGRFAVSTPEAITSCARYCDLLSFNLYTPLPGQGLDDSLLARLDKPVLISEFHFGSRD
RGPFWGGVSEAANERARGDSYRTFLEAALKSPYIVGAHWFQYLDQPASGRLLDGENGHIGLVGITGLPFAGF
VDTVRRSNLAALSRLSAMASSMPAVEPPPPREDSAGS*
AnnotationID:235GeneID:225
AnnotatorUID: danlee
Modification Date/Time: 2004-05-19 13:01:48
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:PA1046
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:453
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:17595
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
Homologs By Global Alignment
Gene ID:225

Identity:

0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score
391 PA1046_tr translation of PA1046 757 98.15 98.54 0 3891.0
22564 gb|AAG04435.1|AE004536_14 (AE004536) hypothetical protein PA1046 [Pseudomonas aeruginosa PAO1] 757 98.15 98.54 0 3891.0
22565 gb|AAN66751.1|AE016303_6 (AE016778) hydrolase, putative [Pseudomonas putida KT2440] 804 53.85 66.91 69 2272.0
GC ORFID: 43227How Found: BLASTX
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: t_PA1046Glimmer Score:
Start: 435652Stop: 437925
Length: 2274
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: t_PA1046 translation of PA1046Homolog Bit Score 1503.0
Other Homologs: t_PA1046 (ORF: GLIMMER)
GC ORF Sequence
ATGGAGTTAAGGAAAACAGGCTTCATGATCCGTTCGCGTTGGCATCTTCCCCTGCTTCTCGGCCTGCTCGCG
GTGGCCGCGCCGCTGGCGGCGAACGACACCCAGCAGGTGCTGTTCAACTTCGTCAAGCCGATGGCCGTGGTC
GGCATCACCCTGGAGGATGCCGACCTGCCCAGCGTGACGGCGGAGGCCACCCCGGAGGGCGACATTCTCCGT
CGCGTCACCTTCAGCCCGGCGCAACGGCCCACCTTGCGCATGAGTCCGGCGCAGGGCCGTTGGGACTGGTCC
GCAGCGGACTACGTGAGCCTGCGCATCCAGAACGCCATGAGCTGGGACATGACCCTGGAGGTCGCGATCGAG
GGCGAGCAGGGCGCGCCGGGGTTGCAGGCATCCATAGAGCTTCCGGCAGGCCCGCCGCAGACCCTGCTGGTG
CCGTTGCGGGCGGTTTCGCCAGAGGCTCTGGGCATGCGTGCGGGGCCGCCGATGCCGCAGATGGTCGAAGGC
CAGCGGATGCTGCTGGCGCCACGCGTGGAGGGCTCGCTGGACCGCGCCAGGGTCGGGGCGCTGAGCCTGTCC
CTGCGCTCGCCGCAAGCTCCCCAGAGCATCCTGCTCGGACGTTTCGGCATACGCGCAGGGAGGGCGGTGGAG
CGGAGCATCCTGACCGGCCTGATCGATCGTTATGGCCAGTACAGCCGCGCCGACTGGCCGGAAAAGATTCGT
TCCGACGAACAGTTGCGCAGCGCCTATGCGGCCGAGGCCGCACAGCTCCGCGACGGGGAACGGCAGACACCG
GCGCGCGACCGTTTCGGCGGCCTGCTGGGTGGGCCGGTGTTCGAAGCCAGCGGCTTCTTCCGCACGGAAAAA
CGTGGCGGGCGCTGGTGGCTGGTTACTCCGGAAGGACATCCGTTCTGGTCGCTGGGCGTTAATGCGGTGACC
GCCGACgGCGGCCGGACCTACGTCGAAGGACGCGAGCCGATGTTCGCCGAACTGCCGGCGGAGGGTGAGCCG
CTGGCCGCATTCTTCGGTGAGGGCGACGACCGCCGCGGCGTCGCCGCGCAGGCCGGGCGGCGTTTCGGGCAT
GGCCGCTGGTTCGATTTCCTCGGTGCCAATCGCCAGCGCATCGCTCCCCAGGCGAGCGCCGACCAGCTCGCC
GGCGAATGGCGCCAGCGCACTCTGGAGCGCCTCTCGGCATGGGGTTTCAACAGCCTCGGCAACTGGAGCGAT
CCGGCGCTCGCCGCACAGGCGCGGATGCCCTACAGCCTGCCGCTGTCGATCGCCGGCGACTACGCCACGGTC
AGCAGCGGTTTCGACTGGTGGGGAGCCATGCCCGATCCCTTCGACCCGCGCTTCGCCATGGCCGCCGAGCGC
GTCATCGCCATCGCTGCTCGCGACCACCGCGACGATCCCTGGCTGTTCGGCTACTACGCCGACAACGAACTG
GCCTGGGCCGGGCGCGACGGCTCGGCCCAGGCGCGCTACGGCCTCGCTTTCGGAGCCTTGAGGCTGTCCATG
GACAGTCCGGCGAAGCGCGCCTTCGTCAAGCAATTGAAAGCCAAGTACCTGCGCCATGAGGCATTGGCCCAG
GCCTGGGGCATCGAGCTGGCCGCCTGGGAGGCCCTGGAGGCGCCGGGCTACGCGGCTCCGCTGCCGGGCGAG
GGGCATCCGGCCATCGCCGAGGACTACAGCGCCTTCCTCCGGCTGTATGCCGACGCTTACTTCAAGACCCTG
CGCGACGCCCTGCAATGGCACGCACCGAACCACCTCCTGCTCGGCGGCCGCTTCGCCGTCAGCACTCCCGAG
GCGATCACCTCCTGCGCCCGGTATTGCGACCTGCTCAGTTTCAACCTCTATACGCCGTTGCCCGGGCAGGGC
CTGGACGACTCCCTGCTGGCGCGGCTGGACAAGCCGGTGCTGATCAGCGAGTTCCACTTCGGCTCGCGGGAT
CGCGGTCCGTTCTGGGGTGGCGTCAGCGAGGCGGCCAATGAGCGGGCGCGCGGCGACTCCTACCGAACGTTC
CTGGAGGCGGCGCTGAAGAGTCCGTATATCGTCGGCGCCCACTGGTTCCAGTACCTCGACCAACCGGCCAGC
GGGCGCCTGCTGGACGGCGAGAACGGTCATATTGGCCTGGTCGGGATCACGGGCTTGCCGTTCGCCGGTTTC
GTCGACACGGTGCGCCGAAGCAACCTTGCCGCCTTGTCGCGACTGTCGGCGATGGCCAGCTCCATGCCTGCC
GTCGAGCCTCCGCCGCCGCGCGAGGATTCAGCCGGTTCATGA