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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG06685.1|AE004752_1 (AE004752) probable ATP-dependent helicase [Pseudomonas aeruginosa PAO1]
Identities = 1322/1326 (99%), Positives = 1323/1326 (99%)
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Sequence:
ATGACCGACCAGACTCCTTCCCTCGACCAACTCGTCCGGCGCCTCGACCAGGCCCAGATCAGCGACCGCCAC
CGCTTGCGCCGGCAGCTCCACGAACTGCGCAAGCAGCCCGACGACGCGCGCCTGGCGCAGTGGGTCGAGCGC
TTCCAGGCCTCCTGCGCCAAGGTCGAGGCGCGGCGCGCCAGCGTGCCGGCGATCCGCTACGACGACAGCCTG
CCGATCGCCGCCAAGCGCGACGAGATCAAGGCCGCCATCGCCGCCCACCAGGTGGTGGTGATCGCCGgcGAG
ACCGGCTCGGGCAAGACCACCCAGTTGCCgAAGATCTGCCTGGAGCTGGGGCGCGGCATCCACGGCCTGATC
GGCCATACCCAGCCGCGTCGGCTGGCGGCGCGCAGCGTGGCGACGCGGGTCGCGGAAGAGATCGGCACGCCG
CTGGGCGCGCTGGTCGGCTACCAGGTGCGCTTCGAGGACCAGAGCGACGACAGCACCCTGGTCAAGCTGATG
ACCGACGGCATCCTCCTGGCCGAGACCCAGCACGACCGCTACCTGGAGCGCTACGACACGCTGATCGTCGAC
GAAGCCCACGAGCGCAGCCTGAACATCGACTTCCTCCTCGGCTACCTGAAGACCCTGTTGCACCGGCGTCCG
GACCTGAAGCTGATCATCACCTCGGCGACCATCGACCTGGAGCGTTTCTCCCGGCATTTCGACGGCGCCCCG
GTGATCGAGGTTTCCGGCCGCACCTATCCGGTGGAGACCTGGTACCGGCCGCTGGCGGCGGAAACCGACGAG
GAGGGCAACCGGGTCGAGGACGACCTGTCGGTGGACCAGGGCATCCTCGCCGCCCTCGACGAGATCGCCGCC
CACGAACGCGAGGTCGGCAAGCGGCCCGGCGACGTGCTGGTGTTCCTCCCCGGCGAGCGGGAGATCCGCGAC
GCCGCGGAGATGCTGCGCAAGGCCAACCTGCGCCACACCGAGGTGCTGCCGCTGTACGCGCGACTGACCCCG
GCCGAGCAGCAGAAGATCTTCCAGCCGCGCCCGGGACGCAAGATCGTGCTGTCCACCAACGTCGCGGAAACC
TCGCTGACGGTGCCGGGCATCCGTTACGTGATCGACAGCGGCACCGCGCGGATCAGCCGCTACAGCTACCGC
GCCAAGGTCCAGCGGCTGCCCATCGAGGCGGTGTCGCAGGCCAGCGCCAACCAGCGCAAGGGCCGTTGCGGA
CGGGTCGAGCCGGGCATATGCGTGCGCCTCTACAGCGAGGAGGACTTCAACGCGCGTCCGGCCTTCACCGAC
CCGGAAATCCTCCGCACCAACCTGGCCGCGGTGATCCTGCAGATGCTGCACCTGCGCCTCGGCGACATCGAG
GCGTTCCCCTTCATCGAGCCGCCGGACGGCAAGGCGATCAAGGACGGCTTCACCCTTCTGCAGGAACTGTCG
GCGGTCAACCGCGAAGGCCAGCTGACCCCGCTGGGGCGCCAACTGGCGCGCCTGCCGATCGACCCGAGGCTG
GGCCGCATGCTGCTGGAGGCGGCCCAGCAGGGTAGCCTCGAGGAAGTGTTGACGGTGGCCAGCGCGCTGTCC
GTGCAGGACCCGCGCGAGCGTCCGGTGGAGCGGCAGCAGGCCGCCGACCAGGCGCACGCGCAATGGAAGGAT
CCGGATTCCGACTTCGCCGCGCTGATCAATCTCTGGCGTGGCTTCGAGGAACAGCGCCAGGCGCTGGGCTCC
AACGCCCTGCGCAGCTGGTGCCGGAAGAACTTCCTCAACTACCTGCGCCTGCGTGAGTGGCGCGACGCCCAC
CGCCAACTGACCCTGATCTGCCGCGAACTGAAGCTGCCGTTCGGGCGTCCGGCCAAGGCCGAGGCGCGCAAG
CCGGAGGCGAAGAAAGGCGCGTCGGCCGACAACGAACGCGAGGTACCGGGGATCGATTACGCGGCGGTCCAC
AAAGCGATCCTGTCCGGCCTGCTCAGCCAGATCGGGCAGAAGGCCGAGGAAGGCGACTACCTCGGCGCTCGC
CAGCGACGTTTCTGGATCCATCCGTCCAGCGGCATCGCTCGCAAGCGCCCGCAATGGATCATGGCCGCGGAA
CTGGTGGAGACCACCAAGCTGTTCGCCCGAATGGTCGCGAAGATCGAGCCGGACTGGCTGGAGCCGCTGGCC
GGGCACCTGATCAAGACCAACCACTTCGAGCCGCACTGGGAGAAGCGTCGCGGCCAGGTGGTGGCGTTCGAG
CAGGTCACCCTCTACGGCCTCATCGTCATCGGTCGACGTCCGGTGCACTATGGTCCGATCGACCCGCCGGTG
GCGCGCGAGCTGTTCATCCGCGAAGGCCTGGTGCGCGGCGAGATCAACAGCCGCGCCAGGTGCCTGAGCGCC
AACCGGCAGTTGCTGGAAAAGCTCGACGAGCTGGAAGCCAAGGCACGCCGGCGCGACATCCTGGCCGACGAG
GAAACCCTGTTCGCCTATTACGACGCGCGCCTGCCGGCGGACATCTACCAGACCGCCAGTTTCGAGAAATGG
TACGCCCGCGAGCGGCAGAACCAGCCGGACCTGCTGCTGATGCGCGAGGAAGACGTGCTGGCCCGCGAAGCC
AGCGAAGTCACTGCGGCGCAGTACCCGGATCGCCTGCGCCTGGGCGATCTGCACCTGTCGCTGAGCTACCAG
TTCGAGCCCGGCACCGCGCGCGACGGCGTCACCGTGCGGGTACCGGCGCCGCTGCTGCCGCAATTGCCGGCC
GAACGCATCGACTGGCTGGTGCCCGGCCTGCTCTACGACAAGGCGGTGGCGCTGGTGCGCAACCTGCCGAAG
GCGATCCGCAAGAGCTTCGTGCCGGTACCGGACTTCGTCCGCGCCGCCCTGGAGCGCATCACCTTCGGCGAA
GGTTCGCTGCCGCAGGCGCTGGGCCGCGAGCTTCAGCGCATGACCGGCGTGCGGGTAGCCGATGAGGCCTGG
GCCGAGGCGGCGACGCAGTTGGACGATCACCTGCGGATGAACATCGAGGTGGTCGACGCCCAGGGCAAGTTC
CTCGGCGAGGGCCGCGACCTGGCCGAACTCACCGCGCGTTTCGCCGAAGCCAGCCAGGCGGCCCTGGCGATA
CCCCAGGCCGACAAGGAACAGCAGCGTCCGGTGGAGGCCAAGGCCTTCGCCAGCGTCGCCGAGAAAGCCCAG
CAGAAGGTCGCCGGATTGTCGATGACGGTATACCCGGCGCTGGTGGAGGAGCAGGGCGAGGTCAAGGAAGGG
CGCTTCCCGACCCAGGCCGAGGCCGACTACCAACACCGCCGCGCCCTGCAACGACTGCTGTTGCAGCAACTG
GCCGAGCCGGCCAAGTACCTGCGCGCCAAGCTGCCGGGGCAGACCGAGATGGGTCTGCTGTACCGCGAGCTG
GGACGGGTCGAGGCGCTGGTCGAGGACATCCTCCTGGCCAGTCTCGACAGTTGCGTGCTGCAGGGCGAAGGC
CTGCCGCGCGACGGCGCCGCCCTGGCCGCGCTGGCCGAGCGCAAGCGCGCTGCCTGGAACGAGCACGCCGAG
CGCCTGGCACGCCTGGTGCTGGATATCCTCAAGCTCTGGCACGGCCTGCAGAAGCGCTTCAAGGGCAAGGTC
GAGCTGGCCATGACCGTGCCGCTGAACGACGTCAAGGGCCAACTGGCCAACCTGGTGTATCCGGGGTTCGTC
CGCGCCACCCCGCTGGAGTGGTTGAAGGAGTATCCGCGTTACCTCAAGGCCATCGAGCAGCGCCTGGACAAG
GTCGCCGGCCAGGTCCAGCGCGACCGGGTGTGGAGCGGCGAGCTGGGCGAACTCTGGGCGCAATACCAGGCG
CGCCTCGCCAAGCACGCCCAGGAAGGCAAGCGCGACGCCGAGTTGCAGGTGTATCGCTGGATGCTGGAGGAG
TACCGGGTCTCGTTGTTCGCCCAGCAACTGGGGACCCGGCTGCCGGTCTCGGACAAGCGCCTGGCCAAGCAG
TGGAGCCAGGTCGAGGGCTAG |
Translation:
MTDQTPSLDQLVRRLDQAQISDRHRLRRQLHELRKQPDDARLAQWVERFQASCAKVEARRASVPAIRYDDSL
PIAAKRDEIKAAIAAHQVVVIAGETGSGKTTQLPKICLELGRGIHGLIGHTQPRRLAARSVATRVAEEIGTP
LGALVGYQVRFEDQSDDSTLVKLMTDGILLAETQHDRYLERYDTLIVDEAHERSLNIDFLLGYLKTLLHRRP
DLKLIITSATIDLERFSRHFDGAPVIEVSGRTYPVETWYRPLAAETDEEGNRVEDDLSVDQGILAALDEIAA
HEREVGKRPGDVLVFLPGEREIRDAAEMLRKANLRHTEVLPLYARLTPAEQQKIFQPRPGRKIVLSTNVAET
SLTVPGIRYVIDSGTARISRYSYRAKVQRLPIEAVSQASANQRKGRCGRVEPGICVRLYSEEDFNARPAFTD
PEILRTNLAAVILQMLHLRLGDIEAFPFIEPPDGKAIKDGFTLLQELSAVNREGQLTPLGRQLARLPIDPRL
GRMLLEAAQQGSLEEVLTVASALSVQDPRERPVERQQAADQAHAQWKDPDSDFAALINLWRGFEEQRQALGS
NALRSWCRKNFLNYLRLREWRDAHRQLTLICRELKLPFGRPAKAEARKPEAKKGASADNEREVPGIDYAAVH
KAILSGLLSQIGQKAEEGDYLGARQRRFWIHPSSGIARKRPQWIMAAELVETTKLFARMVAKIEPDWLEPLA
GHLIKTNHFEPHWEKRRGQVVAFEQVTLYGLIVIGRRPVHYGPIDPPVARELFIREGLVRGEINSRARCLSA
NRQLLEKLDELEAKARRRDILADEETLFAYYDARLPADIYQTASFEKWYARERQNQPDLLLMREEDVLAREA
SEVTAAQYPDRLRLGDLHLSLSYQFEPGTARDGVTVRVPAPLLPQLPAERIDWLVPGLLYDKAVALVRNLPK
AIRKSFVPVPDFVRAALERITFGEGSLPQALGRELQRMTGVRVADEAWAEAATQLDDHLRMNIEVVDAQGKF
LGEGRDLAELTARFAEASQAALAIPQADKEQQRPVEAKAFASVAEKAQQKVAGLSMTVYPALVEEQGEVKEG
RFPTQAEADYQHRRALQRLLLQQLAEPAKYLRAKLPGQTEMGLLYRELGRVEALVEDILLASLDSCVLQGEG
LPRDGAALAALAERKRAAWNEHAERLARLVLDILKLWHGLQKRFKGKVELAMTVPLNDVKGQLANLVYPGFV
RATPLEWLKEYPRYLKAIEQRLDKVAGQVQRDRVWSGELGELWAQYQARLAKHAQEGKRDAELQVYRWMLEE
YRVSLFAQQLGTRLPVSDKRLAKQWSQVEG* |
AnnotationID:32 | GeneID:22 |
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Modification Date/Time: |
2005-04-15 07:07:36 |
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GeneProduct: | putative ATP-dependent helicase |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (11) DNA replication, recombination, modification and repair |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAO57551.1| (AE016870) ATP-dependent helicase HrpA [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 1303
Score = 2125 bits (5506), Expect = 0.0
Identities = 1058/1327 (79%), Positives = 1184/1327 (89%), Gaps = 27/1327 (2%)
>gb|AAM85577.1|AE013804_1 (AE013804) helicase, ATP-dependent [Yersinia pestis KIM]
Length = 1295
Score = 1245 bits (3222), Expect = 0.0
Identities = 658/1327 (49%), Positives = 892/1327 (67%), Gaps = 46/1327 (3%)
>gb|AAN80303.1|AE016760_162 (AE016760) ATP-dependent helicase hrpA [Escherichia coli CFT073]
Length = 1300
Score = 1222 bits (3163), Expect = 0.0
Identities = 655/1337 (48%), Positives = 871/1337 (65%), Gaps = 48/1337 (3%) |
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Structural Features: | COG1643, HrpA, HrpA-like helicases
[DNA replication, recombination, and repair]
CD-Length = 845 residues, 100.0% aligned
Score = 763 bits (1971), Expect = 0.0
Identities = 373/972 (38%), Positives = 487/972 (50%), Gaps = 134/972 (13%) |
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