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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG04944.1|AE004583_9 (AE004583) probable cytochrome c [Pseudomonas aeruginosa PAO1]
Identities = 308/308 (100%), Positives = 308/308 (100%)
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Sequence:
ATGACCACCTTCTGGAGTCTGTACATCACAGCTCTTACCGTCGGTACCTTGATCGCCCTGCTCTGGCTGGTC
TTCGCCACCCGCAAGGGCGAGGCCAAGGGTACTACCGAAAAGACCATGGGCCACTCCTACGACGGCATCGAG
GAGTATGACAACCCGCTGCCGAAGTGGTGGTTCATGCTGTATATCGGCACCATCGTCTTCTCCGTCGGCTAC
CTGGTCCTGTACCCGGGCCTGGGTAACTGGAAAGGCGTGCTGCCGGGCTACGAGGGCGGCTGGACCCAGGAC
AAGCAGTGGGAACGCGAGATGAACATCGCCCAGGAGAAGTACGGGCCGATCTTCGCCAAGTACGCCGCCATG
CCCATCGAGGAAGTGGCCAAGGACGAGCACGCCATGAAGATGGGCAGCCGCATGTTCGCCACCTACTGCTCG
ATCTGCCACGGTTCCGACGCCAAGGGCGCCCTCGGCTTCCCCAACCTGGCCGACAACGAGTGGCGCTGGGGC
GGTGACCCGCAGAGCATCGAGACCACCATCCTCGGCGGTCGCCACGCGATCATGGCGGCCTGGGGCGACATC
CTCGGCGAAGACGGGGTGAAGAACGTCGCCGCCTACGTCCGCACCGAACTCGCCGGGCTGAAGCTGCCGGAA
GGCACCAAGGCCGACGTCGAGGCCGGCAAGCAGATCTTCTCGGTCAACTGCGTCGCCTGCCACGGCCCGGAA
GGCAAGGGTACCGCCCTGGTCGGCGCGCCGAACCTGACCAACCCCGGCGCGTTCATCTACGGCTCCAGCTAC
GCCCAGCTCCAACAAACCATCCGCCATGGCCGCCAGGGCCAGATGCCGGCCCAGGAGCCCTACCTGGGCAAG
GAAAAGGTGCACATCCTGGCCGCCTACATCTACAACCTGTCGCACAACCAGGGCAGCAACTGA |
Translation:
MTTFWSLYITALTVGTLIALLWLVFATRKGEAKGTTEKTMGHSYDGIEEYDNPLPKWWFMLYIGTIVFSVGY
LVLYPGLGNWKGVLPGYEGGWTQDKQWEREMNIAQEKYGPIFAKYAAMPIEEVAKDEHAMKMGSRMFATYCS
ICHGSDAKGALGFPNLADNEWRWGGDPQSIETTILGGRHAIMAAWGDILGEDGVKNVAAYVRTELAGLKLPE
GTKADVEAGKQIFSVNCVACHGPEGKGTALVGAPNLTNPGAFIYGSSYAQLQQTIRHGRQGQMPAQEPYLGK
EKVHILAAYIYNLSHNQGSN* |
AnnotationID:2166 | GeneID:2158 |
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Modification Date/Time: |
2006-02-03 14:02:38 |
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GeneProduct: | putative cytochrome c oxidase, cbb3-type, subunit III |
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Synonyms: | PA1555, fixP, ccoP |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (12) Energy metabolism |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAN69833.1|AE016622_10 (AE016790) cytochrome c oxidase, cbb3-type, subunit III
[Pseudomonas putida KT2440]
Length = 313
Score = 479 bits (1232), Expect = e-134
Identities = 209/304 (68%), Positives = 261/304 (85%)
>gb|AAM76067.1|AF521004_3 (AF521004) cytochrome c oxidase diheme subunit [Pseudomonas
stutzeri]
Length = 305
Score = 457 bits (1175), Expect = e-128
Identities = 197/302 (65%), Positives = 258/302 (85%), Gaps = 2/302 (0%)
>gb|AAO55519.1| (AE016862) cytochrome c oxidase, cbb3-type, subunit III
[Pseudomonas syringae pv. tomato str. DC3000]
Length = 325
Score = 427 bits (1098), Expect = e-119
Identities = 190/319 (59%), Positives = 254/319 (79%), Gaps = 14/319 (4%) |
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Structural Features: | COG2010, CccA, Cytochrome c, mono- and diheme variants
[Energy production and conversion]
CD-Length = 150 residues, 98.7% aligned
Score = 77.3 bits (189), Expect = 2e-15
Identities = 42/157 (26%), Positives = 57/157 (36%), Gaps = 14/157 (8%) |
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Comment: | other possible gene name: fixP |
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