ViewGene

Locus Name:
GeneID:
Location:

GeneID:2153
TrivialName: PA14_51730
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_51730
PAO1 Ortholog Locus:PA0971
Sequence Length:1044
Protein Length:347
Start: 4596526
Stop: 4595483
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG04360.1|AE004530_13 (AE004530) TolA protein [Pseudomonas aeruginosa PAO1]
Identities = 345/347 (99%), Positives = 347/347 (100%)
Sequence:
TTGAAGCAACAGTTCGAGCGCTCGCCTTCCGAGAGTTATTTCTGGCCCGTCGTCCTGGCGGTGGTCCTGCAC
GTTCTGATCTTCGCCATGCTGTTCGTCAGCTGGGCGTTTGCTCCGGAGCTTCCTCCCTCCAAGCCGATCGTG
CAGGCCACGCTCTACCAGCTCAAGTCGAAGAGCCAGGCGACGACCCAGACCAACCAGAAGATCGCTGGCGAG
GCGAAGAAGACCGCCTCCAAGCAATACGAAGTCGAGCAGCTCGAACAGAAGAAGCTCGAGCAGCAGAAACTC
GAGCAACAAAAGCTGGAACAGCAGCAGGTCGCTGCTGCGAAAGCGGCGGAACAAAAGAAGGCTGACGAGGCT
CGAAAGGCCGAGGCCCAGAAAGCCGCCGAGGCGAAGAAGGCCGATGAAGCCAAGAAAGCTGCCGAGGCCAAG
GCCGCCGAACAGAAGAAGCAGGCTGACATAGCCAAGAAGCGCGCCGAGGACGAGGCCAAGAAAAAGGCCGCT
GACGACGCCAAGAAAAAGGCAGCCGAGGACGCGAAGAAGAAAGCGGCCGAGGAGGCCAAGAAGAAGGCTGCT
GCGGAAGCGGCGAAGAAGAAAGCCGCCGTCGAGGCCGCCAAGAAAAAGGCCGCCGCCGCTGCCGCGGCAGCC
CGCAAGGCTGCCGAGGACAAGAAGGCGCAGGCGTTGGCCGAGTTGCTTTCGGATACGACCGAGCGCCAGCAG
GCCCTGGCCGACGAGGTGGGCAGCGAGGTCACCGGCAGTCTCGACGACCTGATCGTCAACCTGGTGAGCCAG
CAGTGGCGGCGTCCTCCATCGGCGCGTAATGGAATGAGCGTAGAAGTACTAATCGAAATGCTGCCGGACGGT
ACCATCACCAATGCCAGCGTCAGCCGTTCGAGTGGCGACAAGCCTTTCGACAGTTCGGCGGTGGCGGCGGTG
CGCAACGTCGGCCGTATTCCCGAGATGCAGCAATTGCCGCGGGCTACCTTCGACAGCCTGTATCGTCAGCGC
CGCATCATCTTTAAACCGGAGGATTTGAGTCTGTGA
Translation:
MKQQFERSPSESYFWPVVLAVVLHVLIFAMLFVSWAFAPELPPSKPIVQATLYQLKSKSQATTQTNQKIAGE
AKKTASKQYEVEQLEQKKLEQQKLEQQKLEQQQVAAAKAAEQKKADEARKAEAQKAAEAKKADEAKKAAEAK
AAEQKKQADIAKKRAEDEAKKKAADDAKKKAAEDAKKKAAEEAKKKAAAEAAKKKAAVEAAKKKAAAAAAAA
RKAAEDKKAQALAELLSDTTERQQALADEVGSEVTGSLDDLIVNLVSQQWRRPPSARNGMSVEVLIEMLPDG
TITNASVSRSSGDKPFDSSAVAAVRNVGRIPEMQQLPRATFDSLYRQRRIIFKPEDLSL*
AnnotationID:2161GeneID:2153
AnnotatorUID: danlee
Modification Date/Time: 2004-05-12 13:01:01
Gene Name:tolA
Confidence Code:2
GeneProduct:TolA protein
Cell Localization:()
Synonyms:PA0971
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(27) Transport of small molecules
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):Membrane proteins
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
TolQRAB (Pseudomonas aeruginosa) 
Comment:
ReferenceID:14517
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:21455
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
ReferenceID:32068
Author/Investigator(s): Dennis JJ, Lafontaine ER, Sokol PA.
Title: Identification and characterization of the tolQRA genes of Pseudomonas aeruginosa.
PubMed: 97113525
MedLine:
Source:
J Bacteriol. 1996 Dec;178(24):7059-68.
Reference Type:Journal
Data:
URL:
ReferenceID:32069
Author/Investigator(s): Lafontaine ER, Sokol PA.
Title: Effects of iron and temperature on expression of the Pseudomonas aeruginosa tolQRA genes: role of the ferric uptake regulator.
PubMed: 98268995
MedLine:
Source:
J Bacteriol. 1998 Jun;180(11):2836-41.
Reference Type:Journal
Data:
URL:
Homologs By Global Alignment
Gene ID:2153

Identity:

0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score
3688 PA0971_tr translation of PA0971 347 99.42 99.99 0 1671.0
113980 gb|AAG04360.1|AE004530_13 (AE004530) TolA protein [Pseudomonas aeruginosa PAO1] 347 99.13 99.99 0 1669.0
113981 gb|AAC44660.2| (U39558) TolA [Pseudomonas aeruginosa] 347 99.13 99.99 0 1669.0
113982 gb|AAN66845.1|AE016313_4 (AE016778) biopolymer transport protein TolA [Pseudomonas putida KT2440] 375 68.00 77.33 31 1147.0
113983 emb|CAB50780.1| (X74218) TolA protein [Pseudomonas putida] 375 68.00 77.33 31 1147.0
GC ORFID: 45155How Found: BLASTX
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: t_PA0971Glimmer Score:
Start: 357381Stop: 358424
Length: 1044
Start Codon: TTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: t_PA0971 translation of PA0971Homolog Bit Score 648.0
Other Homologs: psyr_15may02_Scaffold3_revised_gene4692 (ORF: BLASTX 421.0), t_PA0971 (ORF: GLIMMER)
GC ORF Sequence
TTGAAGCAACAGTTCGAGCGCTCGCCTTCCGAGAGTTATTTCTGGCCCGTCGTCCTGGCGGTGGTCCTGCAC
GTTCTGATCTTCGCCATGCTGTTCGTCAGCTGGGCGTTTGCTCCGGAGCTTCCTCCCTCCAAGCCGATCGTG
CAGGCCACGCTCTACCAGCTCAAGTCGAAGAGCCAGGCGACGACCCAGACCAACCAGAAGATCGCTGGCGAG
GCGAAGAAGACCGCCTCCAAGCAATACGAAGTCGAGCAGCTCGAACAGAAGAAGCTCGAGCAGCAGAAACTC
GAGCAACAAAAGCTGGAACAGCAGCAGGTCGCTGCTGCGAAAGCGGCGGAACAAAAGAAGGCTGACGAGGCT
CGAAAGGCCGAGGCCCAGAAAGCCGCCGAGGCGAAGAAGGCCGATGAAGCCAAGAAAGCTGCCGAGGCCAAG
GCCGCCGAACAGAAGAAGCAGGCTGACATAGCCAAGAAGCGCGCCGAGGACGAGGCCAAGAAAAAGGCCGCT
GACGACGCCAAGAAAAAGGCAGCCGAGGACGCGAAGAAGAAAGCGGCCGAGGAGGCCAAGAAGAAGGCTGCT
GCGGAAGCGGCGAAGAAGAAAGCCGCCGTCGAGGCCGCCAAGAAAAAGGCCGCCGCCGCTGCCGCGGCAGCC
CGCAAGGCTGCCGAGGACAAGAAGGCGCAGGCGTTGGCCGAGTTGCTTTCGGATACGACCGAGCGCCAGCAG
GCCCTGGCCGACGAGGTGGGCAGCGAGGTCACCGGCAGTCTCGACGACCTGATCGTCAACCTGGTGAGCCAG
CAGTGGCGGCGTCCTCCATCGGCGCGTAATGGAATGAGCGTAGAAGTACTAATCGAAATGCTGCCGGACGGT
ACCATCACCAATGCCAGCGTCAGCCGTTCGAGTGGCGACAAGCCTTTCGACAGTTCGGCGGTGGCGGCGGTG
CGCAACGTCGGCCGTATTCCCGAGATGCAGCAATTGCCGCGGGCTACCTTCGACAGCCTGTATCGTCAGCGC
CGCATCATCTTTAAACCGGAGGATTTGAGTCTGTGA