ViewGene
Locus Name:
GeneID:
Location:

GeneID:2145
TrivialName: PA14_35440
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_35440
PAO1 Ortholog Locus:PA2253
Sequence Length:987
Protein Length:328
Start: 3151997
Stop: 3151011
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG05641.1|AE004651_3 (AE004651) L-asparaginase I [Pseudomonas aeruginosa PAO1]
Identities = 326/328 (99%), Positives = 326/328 (99%)
Sequence:
ATGCTCCCAGTCAAGAACCTCTTCGTGCTCTACACCGGCGGCACCATCGGCATGTTGCAGACCCCGCAGGGC
CTGGCCCCGGCCGGCGGCTTCGAAGCGCGCATGCGCGACCACCTGCAAAGCCTCGGCGACGCCCCGGACCTG
CGCTGGCGCTTCGCCGAACTGCAACCGCCGCTGGACAGCGCCAACATGACCCAGGGCAACTGGCTGGCGATG
CGCGACGCCATCGTCGCCGCGCTCGACGCCGGCCACGACGGCGTGCTGCTCCTGCACGGCACCGACACCCTG
GCCTACAGCGCCGCGGCGCTGTCCTTCCTGCTCCTCGACCTGCCGATCCCGGTGCTGCTGACCGGCTCCATG
CTGCCGGCCGGCGCGCCGGGCAGCGATGCCTGGGACAACCTGGTCGGCGCCCTGCGCGTCCTCCAGGAGGGC
CACGCGCGCGGCGTACAGGTCTATTTCAACGATGCCCTGCTGCACGGCGCGCGGGTCAGCAAGCTGCGCAGC
GATGCGTTCGACGCCTTCGCCGAACTGCCGCGACCACGCCACGCCGAGCCTGCGCCGGTGCCCGCGGCGCTC
GGCTACCGCCAGCCGCGCCGGGAAGTGAACCTCGCCGTGCTGCCGCTCTATCCAGGGCTGCGCGCCGCGCAC
CTGCGCGGACTGCTCGACAGCGGCGTGGAAGCGCTGCTGCTGGAATGCTATGGCAGCGGCACCGGCCCGTCC
GACGACGAGGAGCTGCTGGCGACCCTGCGTGAAGCCCACGCCCGCGGCGTGCTGCTCGCCGCGGTCAGCCAG
TGCGCCTACGGCCAGGTCGAGTTCGGCGTCTACGCCGCCGGCAGCCGCCTGCGCGACGCCGGCCTGCTCTCG
GCTGGTGGAATGACCCGCGAGGCGGCCCTGGGCAAGCTCTTCGGCCTGCTCGGCGCCGGCCtcgGACGCGAC
GAAGCGCAACGCTGGTTCGCCCTCGACCTGTGCGGCGAGAACGCCGACTGA
Translation:
MLPVKNLFVLYTGGTIGMLQTPQGLAPAGGFEARMRDHLQSLGDAPDLRWRFAELQPPLDSANMTQGNWLAM
RDAIVAALDAGHDGVLLLHGTDTLAYSAAALSFLLLDLPIPVLLTGSMLPAGAPGSDAWDNLVGALRVLQEG
HARGVQVYFNDALLHGARVSKLRSDAFDAFAELPRPRHAEPAPVPAALGYRQPRREVNLAVLPLYPGLRAAH
LRGLLDSGVEALLLECYGSGTGPSDDEELLATLREAHARGVLLAAVSQCAYGQVEFGVYAAGSRLRDAGLLS
AGGMTREAALGKLFGLLGAGLGRDEAQRWFALDLCGENAD*
AnnotationID:2153GeneID:2145
AnnotatorUID: danlee
Modification Date/Time: 2004-02-05 16:04:59
Gene Name:ansA
Confidence Code:2
GeneProduct:L-asparaginase I
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(2) Amino acid biosynthesis and metabolism
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:COG0252
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:






   
Genomic Context:






   
Comment:


















    ReferenceID:4293




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:17019




  
Author/Investigator(s):
        





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:
NCBI - Conserved Domain Search (BLASTP).






    
Reference Type:Blast (text/plain)







    
Data:PA2253_CDS.cgi


    		




 
URL:

















    ReferenceID:21439




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









           
Homologs By Global Alignment 

           

       



     
Gene ID:2145
           
Identity:

                               
                                   0%
                               
                                   10%
                               
                                   20%
                               
                                   30%
                               
                                   40%
                               
                                   50%
                               
                                   60%
                               
                                   70%
                               
                                   80%
                               
                                   90%
                               
                                   100%
                               
                             

                           

     
HomologID
                           Accession
                           Description
                           Length
                           PctIdentity
                           PctSimilarity
                           Gaps
                           Score
     

     
     
3677
                           PA2253_tr
                           translation of PA2253
                           328
                           99.39
                           99.39
                           0
                           1674.0
     

     
     
113792
                           gb|AAG05641.1|AE004651_3
                           (AE004651) L-asparaginase I [Pseudomonas aeruginosa PAO1]
                           328
                           99.39
                           99.39
                           0
                           1674.0
     

     
     
113793
                           gb|AAN66124.1|AE016241_1
                           (AE016775) L-asparaginase, type I [Pseudomonas putida KT2440]
                           330
                           70.60
                           80.30
                           3
                           1190.0
     

     
     
113794
                           gb|AAO58920.1|
                           (AE016876) L-asparaginase I [Pseudomonas syringae pv. tomato str. DC3000]
                           339
                           53.98
                           66.66
                           16
                           863.0
     

     






      

          
GC ORFID: 45147How Found: BLASTX

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: t_PA2253Glimmer Score: 

          
Start: 1801919Stop: 1802905

          
Length: 987


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: t_PA2253 translation of PA2253Homolog Bit Score 649.0

          
Other Homologs:  psyr_15may02_Scaffold2_revised_gene2911 (ORF: BLASTX 335.0), t_PA2253 (ORF: GLIMMER)

          
GC ORF Sequence

           
ATGCTCCCAGTCAAGAACCTCTTCGTGCTCTACACCGGCGGCACCATCGGCATGTTGCAGACCCCGCAGGGC 
CTGGCCCCGGCCGGCGGCTTCGAAGCGCGCATGCGCGACCACCTGCAAAGCCTCGGCGACGCCCCGGACCTG 
CGCTGGCGCTTCGCCGAACTGCAACCGCCGCTGGACAGCGCCAACATGACCCAGGGCAACTGGCTGGCGATG 
CGCGACGCCATCGTCGCCGCGCTCGACGCCGGCCACGACGGCGTGCTGCTCCTGCACGGCACCGACACCCTG 
GCCTACAGCGCCGCGGCGCTGTCCTTCCTGCTCCTCGACCTGCCGATCCCGGTGCTGCTGACCGGCTCCATG 
CTGCCGGCCGGCGCGCCGGGCAGCGATGCCTGGGACAACCTGGTCGGCGCCCTGCGCGTCCTCCAGGAGGGC 
CACGCGCGCGGCGTACAGGTCTATTTCAACGATGCCCTGCTGCACGGCGCGCGGGTCAGCAAGCTGCGCAGC 
GATGCGTTCGACGCCTTCGCCGAACTGCCGCGACCACGCCACGCCGAGCCTGCGCCGGTGCCCGCGGCGCTC 
GGCTACCGCCAGCCGCGCCGGGAAGTGAACCTCGCCGTGCTGCCGCTCTATCCAGGGCTGCGCGCCGCGCAC 
CTGCGCGGACTGCTCGACAGCGGCGTGGAAGCGCTGCTGCTGGAATGCTATGGCAGCGGCACCGGCCCGTCC 
GACGACGAGGAGCTGCTGGCGACCCTGCGTGAAGCCCACGCCCGCGGCGTGCTGCTCGCCGCGGTCAGCCAG 
TGCGCCTACGGCCAGGTCGAGTTCGGCGTCTACGCCGCCGGCAGCCGCCTGCGCGACGCCGGCCTGCTCTCG 
GCTGGTGGAATGACCCGCGAGGCGGCCCTGGGCAAGCTCTTCGGCCTGCTCGGCGCCGGCCtcgGACGCGAC 
GAAGCGCAACGCTGGTTCGCCCTCGACCTGTGCGGCGAGAACGCCGACTGA