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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG03982.1|AE004495_6 (AE004495) pyridoxal phosphate biosynthetic protein PdxA [Pseudomonas aeruginosa PAO1]
Identities = 326/328 (99%), Positives = 326/328 (99%)
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Sequence:
GTGAGCCTGCGCTTCGCGCTCACTCCCGGCGAGCCGGCAGGTATCGGACCCGATCTGTGCCTGCTGCTCGCC
CGCTCCGCCCAGCCCCACCCCCTGATCGCCATCGCCAGCCGCACGCTCCTGCAAGAGCGCGCCGGCCAACTG
GGCCTGGCGATCTACCTTAAGGACGTTTCCCCGGCCGCCTGGCCAGAGCGACCGGCCAAGGCCGGCCAACTG
TACGTATGGGATACGCCGCTGGCCGCCCCGGTCCGCCCCGGGCAATTGGACCGCGCCAACGCCGCCTACGTC
CTGGAAACCCTGACCCGCGCCGGCCAGGGCTGCCTCGACGGGCACTTCGCCGGGATGATCACCGCACCGGTG
CACAAGGGCGTGATCAACGAAGCCGGCATCCCCTTTTCCGGCCATACCGAATTCCTCGCCGACCTCACCCAC
ACCGCCCAGGTGGTGATGATGCTGGCCACCCGCGGCCTGCGCGTGGCCCTGGCGACCACCCACCTGCCGCTG
CGCGAGGTCGCCGACGCCATTAGCGACGAGCGCCTGGCCCGGGTCGCGCGCATCCTCCACGCCGACCTGCGC
GACAAGTTCGGCATCGCCCATCCGCGCATCCTGGTCTGCGGACTCAACCCGCACGCCGGCGAAGGCGGTCAC
CTGGGGCGGGAAGAGATCGAGGTGATCGAACCCTGCCTCGAGCGCCTGCGTGGCGAAGGCCTCGACCTGATC
GGCCCGCTGCCGGCCGACACCCTGTTCACTCCCAAGCACCTGGAGCATTGCGACGCGGTGCTGGCGATGTAC
CACGACCAGGGTCTCCCCGTGCTCAAGTACAAGGGCTTCGGTGCCGCCGTGAACGTGACCCTCGGCCTGCCG
ATCATCCGCACCTCTGTCGACCACGGTACCGCCCTCGACCTGGCCGGAAGCGGCCGCATCGATAGCGGCAGC
CTGCAGGTGGCCCTGGAAACCGCCTACCAGATGGCGGCCAGCCGCTGCTGA |
Translation:
MSLRFALTPGEPAGIGPDLCLLLARSAQPHPLIAIASRTLLQERAGQLGLAIYLKDVSPAAWPERPAKAGQL
YVWDTPLAAPVRPGQLDRANAAYVLETLTRAGQGCLDGHFAGMITAPVHKGVINEAGIPFSGHTEFLADLTH
TAQVVMMLATRGLRVALATTHLPLREVADAISDERLARVARILHADLRDKFGIAHPRILVCGLNPHAGEGGH
LGREEIEVIEPCLERLRGEGLDLIGPLPADTLFTPKHLEHCDAVLAMYHDQGLPVLKYKGFGAAVNVTLGLP
IIRTSVDHGTALDLAGSGRIDSGSLQVALETAYQMAASRC* |
AnnotationID:2143 | GeneID:2135 |
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Modification Date/Time: |
2005-03-29 09:09:32 |
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GeneProduct: | pyridoxal phosphate biosynthetic protein PdxA |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (4) Biosynthesis of cofactors, prosthetic groups and carriers |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | central intermediary metabolism |
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Homology: | >gb|AAN66033.1|AE016232_6 (AE016775) pyridoxal phosphate biosynthetic protein PdxA
[Pseudomonas putida KT2440]
Length = 329
Score = 560 bits (1442), Expect = e-159
Identities = 276/325 (84%), Positives = 299/325 (92%)
>gb|AAO54094.1| (AE016857) pyridoxal phosphate biosynthetic protein PdxA
[Pseudomonas syringae pv. tomato str. DC3000]
Length = 329
Score = 527 bits (1358), Expect = e-149
Identities = 263/321 (81%), Positives = 286/321 (89%)
>gb|AAC73163.1| (AE000115) pyridoxine biosynthesis [Escherichia coli K12]
Length = 329
Score = 388 bits (997), Expect = e-107
Identities = 201/320 (62%), Positives = 233/320 (72%), Gaps = 1/320 (0%) |
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Structural Features: | pfam04166, PdxA, Pyridoxal phosphate biosynthetic protein PdxA.
CD-Length = 299 residues, 100.0% aligned
Score = 389 bits (1001), Expect = 2e-109
Identities = 169/300 (56%), Positives = 201/300 (67%), Gaps = 1/300 (0%) |
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