ViewGene

Locus Name:
GeneID:
Location:

GeneID:2119
TrivialName: PA14_26090
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_26090
PAO1 Ortholog Locus:PA2934
Sequence Length:960
Protein Length:319
Start: 2279646
Stop: 2278687
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG06322.1|AE004719_8 (AE004719) probable hydrolase [Pseudomonas aeruginosa PAO1]
Identities = 317/319 (99%), Positives = 319/319 (100%)
Sequence:
ATGATCCTCGATAGACTCTGCCGCGGCCTCCTGGCCGGCATCGCCCTGACCTTCTCCCTGGGCGGCTTCGCC
GCCGAGGAATTCCCCGTCCCGAATGGCTTCGAAAGCGCCTACCGGGAAGTCGACGGTGTGAAGCTGCACTAC
GTGAAAGGCGGCCAGGGGCCGCTGGTGATGCTGGTGCACGGCTTCGGCCAGACCTGGTACGAATGGCACCAA
CTGATGCCGGAACTGGCCAAGCGCTTCACCGTGATCGCGCCGGACCTGCCCGGCCTCGGCCAGTCCGAGCCG
CCGAAGACCGGCTATAGCGGCGAACAGGTCGCCGTCTACTTGCACAAGCTGGCCCGGCAATTCAGCCCGGAT
CGCCCGTTCGACCTGGTGGCCCACGACATCGGTATCTGGAACACCTACCCGATGGTGGTGAAGAACCAGGCC
GACATCGCCCGCCTGGTGTACATGGAAGCGCCGATCCCGGACGCGCGGATCTACCGCTTCCCGGCCTTCACC
GCCCAGGGCGAGTCGCTGGTCTGGCACTTCAGTTTCTTCGCCGCCGACGACCGCCTGGCGGAAACCCTGATC
GCCGGCAAGGAACGCTTCTTCCTCGAGCACTTCATCAAGTCCCATGCCAGCAACACCGAGGTGTTCAGCGAG
CGCCTGCTGGATCTGTACGCCAGGTCGTACGCCAAGCCGCACAGCCTGAACGCCTCGTTCGAGTACTACCGC
GCGTTGAACGAGAGCGTGCGGCAGAACGCCGAACTGGCGAAGACCCGCCTGCAGATGCCAACCATGACCCTC
GCCGGCGGCGGCCACGGCGGCATGGGCACGTTCCAGCTGGAGCAGATGAAAGCCTATGCGGAGGACGTCGAA
GGCCATGTCCTGCCCGGCTGCGGCCACTGGCTGCCGGAAGAGTGCGCAGCGCCGATGAATCGCCTGGTGATC
GACTTCCTCAGCCGCGGTCGCTGA
Translation:
MILDRLCRGLLAGIALTFSLGGFAAEEFPVPNGFESAYREVDGVKLHYVKGGQGPLVMLVHGFGQTWYEWHQ
LMPELAKRFTVIAPDLPGLGQSEPPKTGYSGEQVAVYLHKLARQFSPDRPFDLVAHDIGIWNTYPMVVKNQA
DIARLVYMEAPIPDARIYRFPAFTAQGESLVWHFSFFAADDRLAETLIAGKERFFLEHFIKSHASNTEVFSE
RLLDLYARSYAKPHSLNASFEYYRALNESVRQNAELAKTRLQMPTMTLAGGGHGGMGTFQLEQMKAYAEDVE
GHVLPGCGHWLPEECAAPMNRLVIDFLSRGR*
AnnotationID:2127GeneID:2119
AnnotatorUID: diggins
Modification Date/Time: 2005-04-08 10:10:59
Gene Name:
Confidence Code:3
GeneProduct:putative hydrolase
Cell Localization:()
Synonyms:PA2934
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(20) Putative enzymes
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:COG0596
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
COG0596, MhpC, Predicted hydrolases or acyltransferases 
(alpha/beta hydrolase superfamily)
CD-Length = 282 residues,  99.6% aligned
Score = 89.8 bits (220), Expect = 4e-19
Identities = 68/288 (23%), Positives = 107/288 (37%), Gaps = 12/288 (4%)
Genomic Context:
Comment:
ReferenceID:4241
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:21387
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
ReferenceID:38092
Author/Investigator(s):
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type: (text/plain)
Data:2119_cdd.html
URL:
Homologs By Global Alignment
Gene ID:2119

Identity:

0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score
3628 PA2934_tr translation of PA2934 319 99.37 99.99 0 1689.0
111878 gb|AAG06322.1|AE004719_8 (AE004719) probable hydrolase [Pseudomonas aeruginosa PAO1] 319 99.37 99.99 0 1689.0
GC ORFID: 45121How Found: BLASTX
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: t_PA2934Glimmer Score:
Start: 2674279Stop: 2675238
Length: 960
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: t_PA2934 translation of PA2934Homolog Bit Score 655.0
Other Homologs: t_PA2934 (ORF: GLIMMER)
GC ORF Sequence
ATGATCCTCGATAGACTCTGCCGCGGCCTCCTGGCCGGCATCGCCCTGACCTTCTCCCTGGGCGGCTTCGCC
GCCGAGGAATTCCCCGTCCCGAATGGCTTCGAAAGCGCCTACCGGGAAGTCGACGGTGTGAAGCTGCACTAC
GTGAAAGGCGGCCAGGGGCCGCTGGTGATGCTGGTGCACGGCTTCGGCCAGACCTGGTACGAATGGCACCAA
CTGATGCCGGAACTGGCCAAGCGCTTCACCGTGATCGCGCCGGACCTGCCCGGCCTCGGCCAGTCCGAGCCG
CCGAAGACCGGCTATAGCGGCGAACAGGTCGCCGTCTACTTGCACAAGCTGGCCCGGCAATTCAGCCCGGAT
CGCCCGTTCGACCTGGTGGCCCACGACATCGGTATCTGGAACACCTACCCGATGGTGGTGAAGAACCAGGCC
GACATCGCCCGCCTGGTGTACATGGAAGCGCCGATCCCGGACGCGCGGATCTACCGCTTCCCGGCCTTCACC
GCCCAGGGCGAGTCGCTGGTCTGGCACTTCAGTTTCTTCGCCGCCGACGACCGCCTGGCGGAAACCCTGATC
GCCGGCAAGGAACGCTTCTTCCTCGAGCACTTCATCAAGTCCCATGCCAGCAACACCGAGGTGTTCAGCGAG
CGCCTGCTGGATCTGTACGCCAGGTCGTACGCCAAGCCGCACAGCCTGAACGCCTCGTTCGAGTACTACCGC
GCGTTGAACGAGAGCGTGCGGCAGAACGCCGAACTGGCGAAGACCCGCCTGCAGATGCCAACCATGACCCTC
GCCGGCGGCGGCCACGGCGGCATGGGCACGTTCCAGCTGGAGCAGATGAAAGCCTATGCGGAGGACGTCGAA
GGCCATGTCCTGCCCGGCTGCGGCCACTGGCTGCCGGAAGAGTGCGCAGCGCCGATGAATCGCCTGGTGATC
GACTTCCTCAGCCGCGGTCGCTGA