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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG08015.1|AE004877_2 (AE004877) conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 330/332 (99%), Positives = 331/332 (99%)
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Sequence:
ATGGACCCTCGCAGTGAAGTGCTGCTGCGCCAGCGCCACCTCTTCGCGACCCCGCTGCTGCTGGCCGGCCTG
CCCGCCGACGACCTGCTCGCCGAGCTACCGCAGGCCCAGGGCTGGAGCTGGCACGCCGGCGAGCAGGCGCAG
CTGGACGCCCGCTTCCCCGACCGTAGCCGTTTCGACACGCGCGCGCCGACCGGCGCCTGGACTTCGGCCGTT
CTGTTCCTGCCCAAGTCCCGCGAACTGACCGACTACCTGCTGGCCAGCCTGGCCGCCCGCCTGCCCGGCGGC
GAACTCTTCCTGGTCGGCGAAAAGCGCGGCGGGATCGAGCGCGCGAGCAAGCAGTTGGCCGCCTACGGCAAG
CCCCGCAAACTGGATAGCGCGCGGCATTGCCAGCTCTGGCAGGTGCGTATCGAACAGGCGCCGGCCGAGCCC
GACCTGCACGCCCTGGCCCAGCGCTACAGCCTGCCGCTGGCCGATGGCGAGCTGCAGGTGGTGAGCCTGCCG
GGGGTGTTCAGCCATGGCCGCCTGGATCGCGGCAGCGCGCTGCTGCTGGGGCAACTGCAAGCCCTGCCCGGC
GGCCATCTGCTGGACTTCGGCTGCGGTGCCGGCGTACTCGGGGCGGTCCTCAAGCGTCGCTACCCCGCCAGT
CGCCTGACTCTGCTCGACGTCGACGCCTTCGCTGTCGAGAGCAGCCGACTGACCCTCGCCGCCAACGGCCTG
GACGGCGAAGTGATCGCCGCCGACGGCATCGACGGCGCGCCGCGCGAACTCGCCGCGATCGTCAGCAACCCG
CCCTTCCACCAGGGCGTGCACACCGACTACCAGGCCTCCGAGCGCCTGCTGCAACGCGCCGCCGAGCACCTG
GCGCCGGGCGGCGAACTGCGCCTGGTCGCCAACAGCTTCCTGAAGTACCCGCCGTTGATCGAACGCCACCTC
GGCCCCTGCCGGACACTCGCCGAAGGCGACGGTTTCCGCATCTACTCCGCCCGTCGCTCCTGA |
Translation:
MDPRSEVLLRQRHLFATPLLLAGLPADDLLAELPQAQGWSWHAGEQAQLDARFPDRSRFDTRAPTGAWTSAV
LFLPKSRELTDYLLASLAARLPGGELFLVGEKRGGIERASKQLAAYGKPRKLDSARHCQLWQVRIEQAPAEP
DLHALAQRYSLPLADGELQVVSLPGVFSHGRLDRGSALLLGQLQALPGGHLLDFGCGAGVLGAVLKRRYPAS
RLTLLDVDAFAVESSRLTLAANGLDGEVIAADGIDGAPRELAAIVSNPPFHQGVHTDYQASERLLQRAAEHL
APGGELRLVANSFLKYPPLIERHLGPCRTLAEGDGFRIYSARRS* |
AnnotationID:2118 | GeneID:2110 |
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Modification Date/Time: |
2005-05-06 13:01:31 |
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GeneProduct: | putative ribosomal RNA small subunit methyltransferase C |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (26) Translation, post-translational modification, degradation |
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Alternate Gene Product Name: | putative 16S rRNA m2G1207 methylase |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAO10092.1|AE016802_135 (AE016802) 16S RNA G1207 methylase RsmC [Vibrio vulnificus CMCP6]
Length = 340
Score = 217 bits (552), Expect = 9e-56
Identities = 118/261 (45%), Positives = 163/261 (62%), Gaps = 2/261 (0%)
>dbj|BAC60740.1| (AP005081) putative 16S rRNA m2G 1207 methyltransferase [Vibrio
parahaemolyticus]
Length = 341
Score = 210 bits (534), Expect = 1e-53
Identities = 115/262 (43%), Positives = 156/262 (59%), Gaps = 2/262 (0%) |
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Structural Features: | COG2813, RsmC, 16S RNA G1207 methylase RsmC
[Translation, ribosomal structure and biogenesis]
CD-Length = 300 residues, 98.0% aligned
Score = 286 bits (733), Expect = 3e-78
Identities = 119/299 (39%), Positives = 162/299 (54%), Gaps = 7/299 (2%) |
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