ViewGene
Locus Name:
GeneID:
Location:

GeneID:2109
TrivialName: PA14_09490
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_09490
PAO1 Ortholog Locus:PA4209
Sequence Length:1005
Protein Length:334
Start: 813831
Stop: 814835
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG07596.1|AE004837_7 (AE004837) probable phenazine-specific methyltransferase [Pseudomonas aeruginosa PAO1]
Identities = 334/334 (100%), Positives = 334/334 (100%)
Sequence:
ATGAATAATTCGAATCTTGCTGCTGCGCGTAATTTGATACAAGTTGTTACCGGGGAATGGAAGTCCCGTTGC
GTCTACGTCGCTACGCGCCTCGGGCTGGCCGATCTGATCGAGAGCGGGATCGACAGCGACGAGACGCTGGCC
GCCGCGGTCGGTTCCGATGCCGAGCGCATCCATCGACTGATGCGCCTGCTGGTGGCCTTCGAGATCTTCCAG
GGCGATACCCGCGACGGCTACGCTAATACCCCCACCAGCCACCTGCTGAGGGATGTCGAGGGCTCCTTCCGC
GACATGGTGCTGTTCTACGGCGAGGAGTTCCACGCCGCCTGGACGCCCGCCTGCGAGGCGCTGCTCAGCGGT
ACCCCAGGCTTCGAACTGGCGTTCGGCGAAGACTTCTACAGCTACCTGAAGCGCTGCCCGGATGCCGGCCGG
CGCTTCCTGCTGGCGATGAAGGCGAGCAACCTGGCCTTCCACGAGATCCCCAGGCTCCTGGATTTCCGCGGG
CGTAGCTTCGTCGACGTCGGTGGCGGTTCCGGCGAATTGACCAAGGCCATCCTGCAGGCCGAGCCCAGCGCC
CGGGGCGTGATGCTCGATCGCGAGGGTTCCCTCGGCGTGGCCCGCGACAACCTCTCCAGCCTGTTGGCAGGG
GAGCGCGTCAGCCTGGTGGGCGGCGACATGCTGCAAGAGGTGCCGTCCAACGGCGATATCTACCTGCTGTCG
CGGATCATCGGCGATCTGGACGAAGCCGCCAGCCTGAGGTTGCTCGGCAATTGCCGCGAGGCGATGGCCGGC
GACGGCCGGGTGGTGGTGATCGAGCGGACCATCTCGGCCAGCGAGCCGTCGCCGATGTCGGTGCTCTGGGAC
GTGCACCTGTTCATGGCCTGCGCTGGCCGCCACCGCACCACCGAGGAGGTGGTCGACCTGCTCGGGCGCGGC
GGCTTCGCGGTGGAGCGGATCGTCGACCTGCCGATGGAAACCCGCATGATCGTCGCTGCCAGGGCCTGA
Translation:
MNNSNLAAARNLIQVVTGEWKSRCVYVATRLGLADLIESGIDSDETLAAAVGSDAERIHRLMRLLVAFEIFQ
GDTRDGYANTPTSHLLRDVEGSFRDMVLFYGEEFHAAWTPACEALLSGTPGFELAFGEDFYSYLKRCPDAGR
RFLLAMKASNLAFHEIPRLLDFRGRSFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLAG
ERVSLVGGDMLQEVPSNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWD
VHLFMACAGRHRTTEEVVDLLGRGGFAVERIVDLPMETRMIVAARA*
AnnotationID:2117GeneID:2109
AnnotatorUID: danlee
Modification Date/Time: 2003-10-21 11:11:43
Gene Name:phzM
Confidence Code:1
GeneProduct:probable phenazine-specific methyltransferase
Cell Localization:()
Synonyms:alt. GeneProduct name: probable O-methyltransferase
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(20) Putative enzymes
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
phenazine biosynthesis
Homology:
100% identical to phzM (PA4209) of PAO1.
Structural Features:






   
Genomic Context:






   
Comment:


















    ReferenceID:4221




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:21367




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









           
Homologs By Global Alignment 

           

       



     
Gene ID:2109
           
Identity:

                               
                                   0%
                               
                                   10%
                               
                                   20%
                               
                                   30%
                               
                                   40%
                               
                                   50%
                               
                                   60%
                               
                                   70%
                               
                                   80%
                               
                                   90%
                               
                                   100%
                               
                             

                           

     
HomologID
                           Accession
                           Description
                           Length
                           PctIdentity
                           PctSimilarity
                           Gaps
                           Score
     

     
     
3615
                           PA4209_tr
                           translation of PA4209
                           334
                           99.99
                           99.99
                           0
                           1695.0
     

     
     
111640
                           gb|AAG07596.1|AE004837_7
                           (AE004837) probable phenazine-specific methyltransferase [Pseudomonas aeruginosa PAO1]
                           334
                           99.99
                           99.99
                           0
                           1695.0
     

     






      

          
GC ORFID: 45111How Found: BLASTX

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: t_PA4209Glimmer Score: 

          
Start: 4140106Stop: 4139102

          
Length: 1005


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: t_PA4209 translation of PA4209Homolog Bit Score 657.0

          
Other Homologs:  t_PA4209 (ORF: GLIMMER)

          
GC ORF Sequence

           
ATGAATAATTCGAATCTTGCTGCTGCGCGTAATTTGATACAAGTTGTTACCGGGGAATGGAAGTCCCGTTGC 
GTCTACGTCGCTACGCGCCTCGGGCTGGCCGATCTGATCGAGAGCGGGATCGACAGCGACGAGACGCTGGCC 
GCCGCGGTCGGTTCCGATGCCGAGCGCATCCATCGACTGATGCGCCTGCTGGTGGCCTTCGAGATCTTCCAG 
GGCGATACCCGCGACGGCTACGCTAATACCCCCACCAGCCACCTGCTGAGGGATGTCGAGGGCTCCTTCCGC 
GACATGGTGCTGTTCTACGGCGAGGAGTTCCACGCCGCCTGGACGCCCGCCTGCGAGGCGCTGCTCAGCGGT 
ACCCCAGGCTTCGAACTGGCGTTCGGCGAAGACTTCTACAGCTACCTGAAGCGCTGCCCGGATGCCGGCCGG 
CGCTTCCTGCTGGCGATGAAGGCGAGCAACCTGGCCTTCCACGAGATCCCCAGGCTCCTGGATTTCCGCGGG 
CGTAGCTTCGTCGACGTCGGTGGCGGTTCCGGCGAATTGACCAAGGCCATCCTGCAGGCCGAGCCCAGCGCC 
CGGGGCGTGATGCTCGATCGCGAGGGTTCCCTCGGCGTGGCCCGCGACAACCTCTCCAGCCTGTTGGCAGGG 
GAGCGCGTCAGCCTGGTGGGCGGCGACATGCTGCAAGAGGTGCCGTCCAACGGCGATATCTACCTGCTGTCG 
CGGATCATCGGCGATCTGGACGAAGCCGCCAGCCTGAGGTTGCTCGGCAATTGCCGCGAGGCGATGGCCGGC 
GACGGCCGGGTGGTGGTGATCGAGCGGACCATCTCGGCCAGCGAGCCGTCGCCGATGTCGGTGCTCTGGGAC 
GTGCACCTGTTCATGGCCTGCGCTGGCCGCCACCGCACCACCGAGGAGGTGGTCGACCTGCTCGGGCGCGGC 
GGCTTCGCGGTGGAGCGGATCGTCGACCTGCCGATGGAAACCCGCATGATCGTCGCTGCCAGGGCCTGA