ViewGene
Locus Name:
GeneID:
Location:

GeneID:2099
TrivialName: PA14_49800
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_49800
PAO1 Ortholog Locus:PA1127
Sequence Length:990
Protein Length:329
Start: 4429321
Stop: 4430310
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG04516.1|AE004542_12 (AE004542) probable oxidoreductase [Pseudomonas aeruginosa PAO1]
Identities = 329/329 (100%), Positives = 329/329 (100%)
Sequence:
ATGAGCGTTGAAAGCATTCGCATCGAGGGTATCGACACGCCGGTCTCGCGCATCGGCCTCGGCACCTGGGCC
ATCGGCGGCTGGATGTGGGGCGGCGCTGACGACGCGACGTCGGTGGAAACCATCCGGCGTGCGGTGGAATCC
GGGATCAACCTGATCGACACCGCGCCGGTCTATGGCTTCGGCCATTCCGAGGAGGTCGTCGGCAAGGCCTTG
CAGGGCCTGCGCGACAAGGCGGTGATCGCCACCAAGGCGGCGCTGGAGTGGAGCGACGCGGGCATCCACCGC
AACGCCTCCGCCGCACGCATCCGCCGGGAGGTCGAGGACTCACTGCGACGGCTGAAGACCGATCGCATCGAC
CTGTACCAGATCCACTGGCCGGACCCGCTGGTGGCGCACGAGGAGACCGCCGGCGAACTGGAGCGCCTGCGC
CGCGACggcaagaTCCTCGCCATCGGCGTGAGCAACTAtTCGcCGGAACAGATGGACGGGTTCCGccAGTTC
GCTCCGCTGGCcAGCgtgcaacCGCCCTACAAcCTGTTCGAGCGCGCCATCGACGCCGACGTGTTGCCCTAC
GCCGAGCGTAACGGCATCGTCGTGCTGGCCTACGGAGCGCTGTGCCGCGGCCTGCTTTCCGGACGGATGAAC
GCCGAGACCCGCTTCGATGGCGACGACCTGCGCAAGTCCGACCCGAAGTTCCAGCAGCCCCGCTTCGCCCAG
TACCTGGCAGCGGTCGCGCAACTGGAGGAACTGGCTCGCGAGCGCTATGGCAAGTCGGTGCTGGCCCTGGCC
ATCCGCTGGATTCTCGATCGCGGCCCTACGGTGGCGCTGTGGGGGGCGCGCAAGCCGGAGCAGTTGAACGGC
ATCGCCGACGCCTTCGGCTGGCGCCTGGACGACGAGGCCATGGCCCGCATCGAGCGGATCCTCGCCGAGACC
ATCCAGGATCCGGTCGGTCCCGAGTTCATGGCGCCGCCCAGCCGCAACGCCTGA
Translation:
MSVESIRIEGIDTPVSRIGLGTWAIGGWMWGGADDATSVETIRRAVESGINLIDTAPVYGFGHSEEVVGKAL
QGLRDKAVIATKAALEWSDAGIHRNASAARIRREVEDSLRRLKTDRIDLYQIHWPDPLVAHEETAGELERLR
RDGKILAIGVSNYSPEQMDGFRQFAPLASVQPPYNLFERAIDADVLPYAERNGIVVLAYGALCRGLLSGRMN
AETRFDGDDLRKSDPKFQQPRFAQYLAAVAQLEELARERYGKSVLALAIRWILDRGPTVALWGARKPEQLNG
IADAFGWRLDDEAMARIERILAETIQDPVGPEFMAPPSRNA*
AnnotationID:2107GeneID:2099
AnnotatorUID: danlee
Modification Date/Time: 2004-09-07 13:01:16
Gene Name:
Confidence Code:3
GeneProduct:probable oxidoreductase
Cell Localization:()
Synonyms:PA1127, gsp69
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(20) Putative enzymes
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:COG0667, COG0656, pfam00248
Secondary Functional Category(ies):Adaptation, protection
EC Number:
Status:ACTIVE
Pathway:






 
Homology:
75% similar to GENERAL STRESS PROTEIN 69 (GSP69), hypothetical protein similar 
to aldo/keto reductase [Bacillus subtilis] 






 
Structural Features:
COG0667, Tas, Predicted oxidoreductases.  Score: 269, 3e-73
COG0656, ARA1, Aldo/keto reductases. Score: 180, 3e-46
pfam00248, Aldo_ket_red, Aldo/keto reductase family. Score: 165, 7e-42






   
Genomic Context:






   
Comment:


















    ReferenceID:4201




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:21347




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









           
Homologs By Global Alignment 

           

       



     
Gene ID:2099
           
Identity:

                               
                                   0%
                               
                                   10%
                               
                                   20%
                               
                                   30%
                               
                                   40%
                               
                                   50%
                               
                                   60%
                               
                                   70%
                               
                                   80%
                               
                                   90%
                               
                                   100%
                               
                             

                           

     
HomologID
                           Accession
                           Description
                           Length
                           PctIdentity
                           PctSimilarity
                           Gaps
                           Score
     

     
     
3602
                           PA1127_tr
                           translation of PA1127
                           329
                           99.99
                           99.99
                           0
                           1698.0
     

     
     
110566
                           gb|AAG04516.1|AE004542_12
                           (AE004542) probable oxidoreductase [Pseudomonas aeruginosa PAO1]
                           329
                           99.99
                           99.99
                           0
                           1698.0
     

     
     
110567
                           emb|CAA74498.1|
                           (Y14082) hypothetical protein [Bacillus subtilis]
                           333
                           60.66
                           74.77
                           6
                           1038.0
     

     
     
110568
                           emb|CAB12792.1|
                           (Z99109) yhdN [Bacillus subtilis subsp. subtilis str. 168]
                           333
                           60.66
                           74.77
                           6
                           1038.0
     

     
     
110569
                           emb|CAC48882.1|
                           (AL603643) putative aldoketo reductase protein [Sinorhizobium meliloti]
                           353
                           40.79
                           54.39
                           46
                           621.0
     

     






      

          
GC ORFID: 45101How Found: BLASTX

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: t_PA1127Glimmer Score: 

          
Start: 524587Stop: 523598

          
Length: 990


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: t_PA1127 translation of PA1127Homolog Bit Score 658.0

          
Other Homologs:  t_PA1127 (ORF: GLIMMER)

          
GC ORF Sequence

           
ATGAGCGTTGAAAGCATTCGCATCGAGGGTATCGACACGCCGGTCTCGCGCATCGGCCTCGGCACCTGGGCC 
ATCGGCGGCTGGATGTGGGGCGGCGCTGACGACGCGACGTCGGTGGAAACCATCCGGCGTGCGGTGGAATCC 
GGGATCAACCTGATCGACACCGCGCCGGTCTATGGCTTCGGCCATTCCGAGGAGGTCGTCGGCAAGGCCTTG 
CAGGGCCTGCGCGACAAGGCGGTGATCGCCACCAAGGCGGCGCTGGAGTGGAGCGACGCGGGCATCCACCGC 
AACGCCTCCGCCGCACGCATCCGCCGGGAGGTCGAGGACTCACTGCGACGGCTGAAGACCGATCGCATCGAC 
CTGTACCAGATCCACTGGCCGGACCCGCTGGTGGCGCACGAGGAGACCGCCGGCGAACTGGAGCGCCTGCGC 
CGCGACggcaagaTCCTCGCCATCGGCGTGAGCAACTAtTCGcCGGAACAGATGGACGGGTTCCGccAGTTC 
GCTCCGCTGGCcAGCgtgcaacCGCCCTACAAcCTGTTCGAGCGCGCCATCGACGCCGACGTGTTGCCCTAC 
GCCGAGCGTAACGGCATCGTCGTGCTGGCCTACGGAGCGCTGTGCCGCGGCCTGCTTTCCGGACGGATGAAC 
GCCGAGACCCGCTTCGATGGCGACGACCTGCGCAAGTCCGACCCGAAGTTCCAGCAGCCCCGCTTCGCCCAG 
TACCTGGCAGCGGTCGCGCAACTGGAGGAACTGGCTCGCGAGCGCTATGGCAAGTCGGTGCTGGCCCTGGCC 
ATCCGCTGGATTCTCGATCGCGGCCCTACGGTGGCGCTGTGGGGGGCGCGCAAGCCGGAGCAGTTGAACGGC 
ATCGCCGACGCCTTCGGCTGGCGCCTGGACGACGAGGCCATGGCCCGCATCGAGCGGATCCTCGCCGAGACC 
ATCCAGGATCCGGTCGGTCCCGAGTTCATGGCGCCGCCCAGCCGCAACGCCTGA