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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG04941.1|AE004583_6 (AE004583) probable cytochrome c [Pseudomonas aeruginosa PAO1]
Identities = 318/318 (100%), Positives = 318/318 (100%)
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Sequence:
ATGACGACCTTCTGGAGTCTGTACATTACAGCTCTCACCCTCGGCACCCTGCTGGCGCTGACCTGGCTGATC
TTCGCCACCCGCAAGGGCCAGCGCAGCAGCACCACCGACGAGACCGTGGGCCACTCCTACGACGGCATCGAG
GAGTACGACAACCCGCTGCCGAAGTGGTGGTTCATGCTGTTCGTCGGCACCCTGGTGTTCGCCGTGGGCTAC
CTGGCCCTGTACCCGGGCCTGGGCACCTGGAAAGGCCTGATGCCGGGCTACCAGTCCGCCGACGAATTCGCC
GACAAGGAAAAAGGCTGGACCGGCGTCCACCAGTGGGAAAAGGAAATGGCCAAGGCCGACGAGAAATACGGC
CCGATCTTCGCCAAGTTCGCCGCGATGCCCATCGAGGAAGTCGCCAAGGATCCGCAGGCGGTGAAAATGGGC
GGTCGCCTGTTCGCCTCCAACTGCTCGATCTGCCACGGCTCCGACGCCAAGGGCGCCTACGGCTTCCCCAAC
CTGACCGACGCCGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGACCACCATCATGGCTGGCCGCCAC
GCCGCCATGCCGGCCTGGGGTGAAGTGATCGGCGAGGAAGGCGTGAAGAACGTCGCCGCTTTCGTCCTCACC
CAGATGGATGGCCGCAAGCTGCCGGAAGGCGCCAAGGCAGACATCGAGGCCGGCAAGCAGGTCTTCGCCACC
ACCTGCGTCGCCTGCCACGGTCCGGAAGGCAAGGGCACCCCAGCGATGGGCGCTCCCGATCTGACCCACCCC
GGCGCGTTCATCTACGGCTCCAGCTTCGCGCAACTGCAGCAGACCATCCGCTACGGTCGCCAGGGCGTGATG
CCGGCGCAACAGGAACACCTGGGCAACGACAAGGTGCACCTGCTGGCCGCCTACGTATACAGCCTGTCGCAC
GGCGAGAAGAGCGCCGAATAA |
Translation:
MTTFWSLYITALTLGTLLALTWLIFATRKGQRSSTTDETVGHSYDGIEEYDNPLPKWWFMLFVGTLVFAVGY
LALYPGLGTWKGLMPGYQSADEFADKEKGWTGVHQWEKEMAKADEKYGPIFAKFAAMPIEEVAKDPQAVKMG
GRLFASNCSICHGSDAKGAYGFPNLTDADWRWGGEPETIKTTIMAGRHAAMPAWGEVIGEEGVKNVAAFVLT
QMDGRKLPEGAKADIEAGKQVFATTCVACHGPEGKGTPAMGAPDLTHPGAFIYGSSFAQLQQTIRYGRQGVM
PAQQEHLGNDKVHLLAAYVYSLSHGEKSAE* |
AnnotationID:2070 | GeneID:2062 |
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Modification Date/Time: |
2006-02-03 14:02:48 |
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GeneProduct: | putative cytochrome c oxidase, cbb3-type, subunit III |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (12) Energy metabolism |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAN69838.1|AE016622_15 (AE016790) cytochrome c oxidase, cbb3-type, subunit III
[Pseudomonas putida KT2440]
Length = 325
Score = 545 bits (1404), Expect = e-154
Identities = 249/323 (77%), Positives = 286/323 (88%), Gaps = 5/323 (1%)
>gb|AAO55519.1| (AE016862) cytochrome c oxidase, cbb3-type, subunit III
[Pseudomonas syringae pv. tomato str. DC3000]
Length = 325
Score = 501 bits (1289), Expect = e-141
Identities = 225/323 (69%), Positives = 276/323 (85%), Gaps = 5/323 (1%)
>dbj|BAC59804.1| (AP005078) cytochrome c oxidase, subunit CcoP [Vibrio
parahaemolyticus]
Length = 324
Score = 290 bits (743), Expect = 6e-78
Identities = 155/328 (47%), Positives = 205/328 (62%), Gaps = 20/328 (6%) |
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Structural Features: | COG2010, CccA, Cytochrome c, mono- and diheme variants
[Energy production and conversion]
CD-Length = 150 residues, 94.0% aligned
Score = 79.3 bits (194), Expect = 5e-16
Identities = 38/145 (26%), Positives = 58/145 (40%), Gaps = 9/145 (6%)
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