ViewGene

Locus Name:
GeneID:
Location:

GeneID:2051
TrivialName: PA14_30360
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_30360
PAO1 Ortholog Locus:PA2609
Sequence Length:984
Protein Length:327
Start: 2631944
Stop: 2630961
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG05997.1|AE004689_9 (AE004689) hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 327/327 (100%), Positives = 327/327 (100%)
Sequence:
ATGACTCTCTCGACTCCCGCCGAACATCCGTTCGCCCAGTTCGTCCGCATCCTCGGCAAAGGCAAGCGCGGA
GCGCGCAGCCTGACCCGGGAGGAAGCCCGCGAGGCCCTCGGCATGATCCTCGACGGCAGGGTCGAGGACACC
CAGCTGGGCGCCTTCCTCATGCTCCTGCGGCACAAGGAGGAAAGCAGCGAGGAACTGGCCGGTTTCACCGAG
GCGGTGCGCGAGCGCCTGCAAGTCCCGTCCTTGCGCGTCGACCTCGACTGGCCCAGTTACGCCGGCAAGAAG
CGCCACCTGCCCTGGTACCTGCTGGCCGCCAAGTGCCTGGCCGGCCATGGCGTGCGCATCCTCATGCACGGC
GGCGGCGCGCATACCGCCGGACGCCTGTACAGCGAACAGTTGCTGGCGGCGCTGGAGATCCCGCTCTGCCAC
GACTGGCTGCAGGTAGAGCAGGCCCTGGAGCGCGGCCACCTGGCGTTCATTCCGCTCGGTGCCTGGATGCCG
GTGCTGCAACGTATGATCGATCTGCGCAATACCCTCGGTCTGCGCTCGCCGATCCATTCGCTGGTTCGCCTG
CTCAACCCCCTGAATGCGGATTGCATCCTGCAGAGCATCTTCCACCCCGGTTACCAGGAAACCCACCGCGAG
GCCAGCCGCCTGCTCGGCGACCGGGCCATCGTCATCAAGGGCGAAGGCGGCGAGATCGAAGTCAACCCGGAC
GTCGTCGCCCACCTGTATGGTTGCGACCAGGGCGAAGCCTGGGACGAGGAATGGCCGGCATTGTCGACGCAC
CGGCACATGAAGCCGGAACAGCTCGACCCGGGTTTCCTTCGGGCCGTCTGGGACGGCCGCGAAGGCGACGCC
TATGGCCACCTGGCGGTGCTCTCCAGCATGGCCCTGGCGCTACGGGCCCTTGGCAAGAATCGCGAAGAAGCC
TTCAAGGAAGCCGCGCACTACTGGGCGACCCGAAACGAATCGATCTGA
Translation:
MTLSTPAEHPFAQFVRILGKGKRGARSLTREEAREALGMILDGRVEDTQLGAFLMLLRHKEESSEELAGFTE
AVRERLQVPSLRVDLDWPSYAGKKRHLPWYLLAAKCLAGHGVRILMHGGGAHTAGRLYSEQLLAALEIPLCH
DWLQVEQALERGHLAFIPLGAWMPVLQRMIDLRNTLGLRSPIHSLVRLLNPLNADCILQSIFHPGYQETHRE
ASRLLGDRAIVIKGEGGEIEVNPDVVAHLYGCDQGEAWDEEWPALSTHRHMKPEQLDPGFLRAVWDGREGDA
YGHLAVLSSMALALRALGKNREEAFKEAAHYWATRNESI*
AnnotationID:2059GeneID:2051
AnnotatorUID: diggins
Modification Date/Time: 2005-03-07 11:11:33
Gene Name:
Confidence Code:3
GeneProduct:putative anthranilate phosphoribosyltransferase
Cell Localization:()
Synonyms:PA2609
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(27) Transport of small molecules
Alternate Gene Product Name:putative glycosyl transferase
Functional Category Confidence Code:5
COGs:COG0547
Secondary Functional Category(ies):amino acid biosynthesis and metabolims
EC Number:
Status:ACTIVE
Pathway:
Homology:
>gb|AAN69591.1|AE016592_10 (AE016788) glycosyl transferase, putative [Pseudomonas putida
           KT2440]
          Length = 333

 Score =  494 bits (1271), Expect = e-139
 Identities = 239/327 (73%), Positives = 270/327 (82%)

>gb|AAO56820.1| (AE016868) glycosyl transferase, putative [Pseudomonas syringae pv.
           tomato str. DC3000]
          Length = 333

 Score =  487 bits (1254), Expect = e-137
 Identities = 233/327 (71%), Positives = 271/327 (82%)

Structural Features:
COG0547, TrpD, Anthranilate phosphoribosyltransferase 
[Amino acid transport and metabolism]
CD-Length = 338 residues,  95.6% aligned
Score =  245 bits (627), Expect = 6e-66
Identities = 101/329 (30%), Positives = 148/329 (44%), Gaps = 19/329 (5%)

Genomic Context:
Comment:
ReferenceID:4105
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:21251
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
ReferenceID:33163
Author/Investigator(s):
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:Misc (text/plain)
Data:2051_cdd.html
URL:
Homologs By Global Alignment
Gene ID:2051

Identity:

0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score
3547 PA2609_tr translation of PA2609 327 99.99 99.99 0 1723.0
109351 gb|AAG05997.1|AE004689_9 (AE004689) hypothetical protein PA2609 [Pseudomonas aeruginosa PAO1] 327 99.99 99.99 0 1723.0
109352 gb|AAN69591.1|AE016592_10 (AE016788) glycosyl transferase, putative [Pseudomonas putida KT2440] 333 71.77 81.08 6 1271.0
109353 gb|AAO56820.1| (AE016868) glycosyl transferase, putative [Pseudomonas syringae pv. tomato str. DC3000] 333 69.96 81.38 6 1254.0
GC ORFID: 45053How Found: BLASTX
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: t_PA2609Glimmer Score:
Start: 2321982Stop: 2322965
Length: 984
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: t_PA2609 translation of PA2609Homolog Bit Score 668.0
Other Homologs: psyr_15may02_Scaffold17_revised_gene2746 (ORF: BLASTX 485.0), t_PA2609 (ORF: GLIMMER)
GC ORF Sequence
ATGACTCTCTCGACTCCCGCCGAACATCCGTTCGCCCAGTTCGTCCGCATCCTCGGCAAAGGCAAGCGCGGA
GCGCGCAGCCTGACCCGGGAGGAAGCCCGCGAGGCCCTCGGCATGATCCTCGACGGCAGGGTCGAGGACACC
CAGCTGGGCGCCTTCCTCATGCTCCTGCGGCACAAGGAGGAAAGCAGCGAGGAACTGGCCGGTTTCACCGAG
GCGGTGCGCGAGCGCCTGCAAGTCCCGTCCTTGCGCGTCGACCTCGACTGGCCCAGTTACGCCGGCAAGAAG
CGCCACCTGCCCTGGTACCTGCTGGCCGCCAAGTGCCTGGCCGGCCATGGCGTGCGCATCCTCATGCACGGC
GGCGGCGCGCATACCGCCGGACGCCTGTACAGCGAACAGTTGCTGGCGGCGCTGGAGATCCCGCTCTGCCAC
GACTGGCTGCAGGTAGAGCAGGCCCTGGAGCGCGGCCACCTGGCGTTCATTCCGCTCGGTGCCTGGATGCCG
GTGCTGCAACGTATGATCGATCTGCGCAATACCCTCGGTCTGCGCTCGCCGATCCATTCGCTGGTTCGCCTG
CTCAACCCCCTGAATGCGGATTGCATCCTGCAGAGCATCTTCCACCCCGGTTACCAGGAAACCCACCGCGAG
GCCAGCCGCCTGCTCGGCGACCGGGCCATCGTCATCAAGGGCGAAGGCGGCGAGATCGAAGTCAACCCGGAC
GTCGTCGCCCACCTGTATGGTTGCGACCAGGGCGAAGCCTGGGACGAGGAATGGCCGGCATTGTCGACGCAC
CGGCACATGAAGCCGGAACAGCTCGACCCGGGTTTCCTTCGGGCCGTCTGGGACGGCCGCGAAGGCGACGCC
TATGGCCACCTGGCGGTGCTCTCCAGCATGGCCCTGGCGCTACGGGCCCTTGGCAAGAATCGCGAAGAAGCC
TTCAAGGAAGCCGCGCACTACTGGGCGACCCGAAACGAATCGATCTGA