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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG03784.1|AE004477_1 (AE004477) twitching motility protein PilT [Pseudomonas aeruginosa PAO1]
Identities = 344/344 (100%), Positives = 344/344 (100%)
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Sequence:
ATGGATATTACCGAGCTGCTCGCCTTCAGTGCCAAACAGGGCGCTTCGGACCTGCACCTCTCCGCCGGCCTG
CCGCCCATGATCCGGGTGGATGGCGATGTACGCCGGATCAACCTGCCACCGCTGGAACACAAGCAGGTGCAT
GCGCTGATCTACGACATCATGAACGACAAGCAGCGCAAGGACTTCGAGGAATTCCTCGAGACCGACTTCTCC
TTCGAGGTGCCGGGCGTCGCGCGTTTCCGGGTCAACGCCTTCAACCAGAACCGTGGCGCCGGCGCGGTATTC
CGGACCATTCCCTCCAAGGTACTGACCATGGAGGAGCTTGGCATGGGAGAAGTGTTCAAACGTGTTTCAGAC
GTCCCGCGCGGGCTGGTACTGGTCACCGGGCCGACCGGTTCGGGCAAGTCCACCACCCTGGCGGCGATGCTC
GACTACCTGAACAACACCAAGTACCACCACATCCTCACCATCGAGGACCCGATCGAATTCGTCCACGAATCG
AAGAAGTGCCTGGTCAACCAGCGCGAGGTGCATCGCGACACCCTCGGCTTCAGCGAAGCGCTGCGCTCGGCG
CTGCGGGAGGACCCGGACATCATCCTGGTCGGCGAGATGCGCGACCTGGAAACCATCCGCCTGGCCCTGACC
GCGGCGGAGACCGGCCACCTGGTATTCGGCACCCTGCACACCACCTCGGCGGCGAAGACCATCGACCGGGTG
GTCGACGTGTTCCCGGCCGAGGAAAAGGCCATGGTTCGCTCGATGCTCTCCGAGTCGCTGCAATCGGTGATC
TCGCAGACCCTGATCAAGAAGATCGGCGGCGGCCGGGTGGCGGCCCACGAGATCATGATCGGCACCCCGGCG
ATCCGCAACCTGATCCGCGAGGACAAGGTCGCGCAGATGTATTCGGCGATCCAGACCGGCGGCTCGCTGGGC
ATGCAGACCCTCGACATGTGCCTCAAGGGCCTGGTCGCCAAGGGCCTGATCAGCCGCGAGAATGCCCGCGAG
AAGGCGAAGATCCCGGAAAACTTCTGA |
Translation:
MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPLEHKQVHALIYDIMNDKQRKDFEEFLETDFS
FEVPGVARFRVNAFNQNRGAGAVFRTIPSKVLTMEELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAML
DYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVHRDTLGFSEALRSALREDPDIILVGEMRDLETIRLALT
AAETGHLVFGTLHTTSAAKTIDRVVDVFPAEEKAMVRSMLSESLQSVISQTLIKKIGGGRVAAHEIMIGTPA
IRNLIREDKVAQMYSAIQTGGSLGMQTLDMCLKGLVAKGLISRENAREKAKIPENF* |
AnnotationID:2048 | GeneID:2040 |
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Modification Date/Time: |
2005-03-25 07:07:16 |
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GeneProduct: | twitching motility protein PilT |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (16) Motility & Attachment |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >emb|CAB56295.1| (AJ249385) twitching motility protein [Pseudomonas stutzeri]
Length = 344
Score = 644 bits (1660), Expect = 0.0
Identities = 324/344 (94%), Positives = 341/344 (99%)
>gb|AAO58473.1| (AE016874) twitching motility protein [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 344
Score = 605 bits (1560), Expect = e-172
Identities = 300/344 (87%), Positives = 331/344 (96%)
>gb|AAM37769.1| (AE011934) twitching motility protein [Xanthomonas axonopodis pv.
citri str. 306]
Length = 345
Score = 540 bits (1391), Expect = e-153
Identities = 268/339 (79%), Positives = 305/339 (89%) |
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Structural Features: | COG2805, PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT
[Cell motility and secretion / Intracellular trafficking and secretion]
CD-Length = 353 residues, 97.2% aligned
Score = 549 bits (1415), Expect = 2e-157
Identities = 232/343 (67%), Positives = 272/343 (79%), Gaps = 1/343 (0%)
cd01131, PilT, Pilus retraction ATPase PilT.
CD-Length = 198 residues, 100.0% aligned
Score = 329 bits (844), Expect = 3e-91
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