ViewGene
Locus Name:
GeneID:
Location:

GeneID:203
TrivialName: PA14_29050
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_29050
PAO1 Ortholog Locus:PA2714
Sequence Length:2310
Protein Length:769
Start: 2513929
Stop: 2511620
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG06102.1|AE004699_7 (AE004699) probable molybdopterin oxidoreductase [Pseudomonas aeruginosa PAO1]
Identities = 765/769 (99%), Positives = 768/769 (99%)
Sequence:
GTGACTACGCCGTCCCCGCAATGGAAGAAGACCGCCTGTATCCTCTGCAGCCTCAACTGCGGGCTGGAAGTG
CAGACCGAGAATGGCCGCATCAGCAAGATCCGCGGCGATGACGACCACCCCGCCTCGCAGGGCTACGTCTGC
GAGAAATCGCAGCGCATGGACTACTACCAGAACGGCGCCGACCGCCTGGACACGCCGATGCGCCGGCGCCCC
GATGGCAGCTACGAAGCCATCGACTGGGACACGGCGATCCGCGAGGTGGCGGAGAAGTTCCTCGCCATCAAG
CGCAGGCATGGCGGCGAAAGCATCCTCTACTACGGCGGCGGCGCGCAGGGCAACCACCTCGGCGGCGCCTAC
GGCGACAGCACGCTGAAGGCCCTCGGGGTGAAGTACCGCTCCAACGCCCTGGCCCAGGAAAAGACCGGCGAG
TTCTGGGTCCAGGGCAAGATGTTCGGTACCGGCGTGCACGGCGACTTCGAGCATTGCGAGGTGGCCATCCTG
ATCGGCAAGAATCCCTGGCAATCCCATGGTTTCGCCCGCGCCCGCGTGCTGCTCAACGCCATGGCCAAGGAT
CCCGCGCGCTCGATCATCGTGATCGACCCGCGCCTGAGCGAAACCGCCGCCCTGGCCGACTTCCACCTGCAG
ATCCGTCCGGGCACCGACGCCTGGTGCCTGGCGGCGCTGGTCGGGATCATCGTCCAGGACGGGCTGCTGGCG
CGCGACTGGCTGGCCGAGCACACCAGCGGCTACGAGCACATCGTCGACGAACTGAACGCCATCCCAGTGGCC
TACTGCGCCGAGACCTGCGGGGTGGCGGAAGACAAGCTGCGCGCCGCCGCCCGGCGGATCGCCAGCGCCAGC
AGCGTATCGGCGCTGGAAGACCTGGGCATGCAGATGAACCTGCACTCGACCCTCGGCAGCTACCTGCAACGC
CTGGTCTGGTTGCTCACCGGCCATTACGGGCGCCCCGGCACCAGCAACGCCTTCGTGCCCTTCCTCTCGCTG
TCCAAGGCCAGCAAGGGCGATACCTCGATGGGCAAGAAGGGCGCGCCACGCGTCGAGAAGCGCAGCCCGGTG
GCCAACGCCAAGATCATCATCGGCCTGATTCCCTGCAACGTGATTCCAGAGGAAATCCTCACCGACCATCCC
AAGCGCTATCGCGCCATGCTGGTGGAGACCGGCAACCCGCTGCATTCGCTGGCCGATAGCCAGCGCATGCGC
GAAGCCATGCGCGCCCTGGAGCTGTCGGTGGTGATCGACGTGGCCATGACCGAGACCGCGCGCCACGCCGAC
TACGTGCTGCCGGCGGCGAGCCAGTTCGAAAAGGCCGAGGCGACCTTCTTCAACCTGGAATTCCCGCGCAAC
GCCTTCCATCTGCGCGCGCCGCTGTTCCCGGCGCGCCCCGGCACCCTGCCGGAAGCGGAGATCCACGCCCGC
CTGCTAGAAGCCATGGGCGTGCTCGGCGAGAAAGACTACCGGCCGCTGCGCCTGGCCCTCAAGCTCGGGCGC
AAGGCGTTCTCGGCGGCCTTCCTCGCCGCCGCGGCGACCCGCCCCAAGGTCATGAAATACGCGCCGGTCCTG
CTCTACCGTACCCTCGGCCCGACCCTGCCCGCCGGCATGGAAGCGGCCGCGGCGATCTGGGGCATCTGCCAA
CTGCACGTGCTGAACAACCGCAAGACCGCTGCCCGCGCCGGCTTCGACGGCTTGCCGCCGCTGGCCGCCGAC
CGCCTGTTCCAGGCCATGCTCGACAACCCGTCCGGGGTGGTCTTCGCCGAAACCACCCACGCCGAAAGCTGG
CAGGCCGTCGCCCGTCCCGAACAGCGGATCAACCTGCACATCCCCGAACTGTTGCCGGAACTGGCCAAGCTC
GCCCACAGCGCGCCACCCCACGATCCGGCCTACCCGTTCATCCTCGCCGCCGGCGAGCGACGCAGCGACACC
AGCAATACCGCCGTACGCGACACCGGCTGGCACCGCCGCGGGCGCTACGGCACCCTGCGCATCAGTCCGCAG
GACGCCGAGGCGCTGGGCTGCGCCGACGGCGAGGTGCTGCGCGTGGTGACCCGCCGCGGCGACGTCGAGGCG
GAAGTGGAGATCAGCGACATGATGCAGCCGGGCAATATCTCCCTGCCCAACGGCCAGGGCCTGGACTACCGC
AACGCCGAGGGCGAGGTGGTGCGCCGGGGCGTGGCGCCCAACGAGGTGACCGACTGCACCCAGCGCGACTTC
CTCGCCGGCACGCCCTGGCACAAGTACGTGCCGGCGCGCCTGGAACGGCTGGCGACGCCCGCCGCTACGAAC
GCCTGA
Translation:
MTTPSPQWKKTACILCSLNCGLEVQTENGRISKIRGDDDHPASQGYVCEKSQRMDYYQNGADRLDTPMRRRP
DGSYEAIDWDTAIREVAEKFLAIKRRHGGESILYYGGGAQGNHLGGAYGDSTLKALGVKYRSNALAQEKTGE
FWVQGKMFGTGVHGDFEHCEVAILIGKNPWQSHGFARARVLLNAMAKDPARSIIVIDPRLSETAALADFHLQ
IRPGTDAWCLAALVGIIVQDGLLARDWLAEHTSGYEHIVDELNAIPVAYCAETCGVAEDKLRAAARRIASAS
SVSALEDLGMQMNLHSTLGSYLQRLVWLLTGHYGRPGTSNAFVPFLSLSKASKGDTSMGKKGAPRVEKRSPV
ANAKIIIGLIPCNVIPEEILTDHPKRYRAMLVETGNPLHSLADSQRMREAMRALELSVVIDVAMTETARHAD
YVLPAASQFEKAEATFFNLEFPRNAFHLRAPLFPARPGTLPEAEIHARLLEAMGVLGEKDYRPLRLALKLGR
KAFSAAFLAAAATRPKVMKYAPVLLYRTLGPTLPAGMEAAAAIWGICQLHVLNNRKTAARAGFDGLPPLAAD
RLFQAMLDNPSGVVFAETTHAESWQAVARPEQRINLHIPELLPELAKLAHSAPPHDPAYPFILAAGERRSDT
SNTAVRDTGWHRRGRYGTLRISPQDAEALGCADGEVLRVVTRRGDVEAEVEISDMMQPGNISLPNGQGLDYR
NAEGEVVRRGVAPNEVTDCTQRDFLAGTPWHKYVPARLERLATPAATNA*
AnnotationID:213GeneID:203
AnnotatorUID: diggins
Modification Date/Time: 2005-03-10 10:10:47
Gene Name:
Confidence Code:3
GeneProduct:putative molybdopterin oxidoreductase
Cell Localization:()
Synonyms:PA2714
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(12) Energy metabolism
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:COG0243
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:
>emb|CAD93067.1| (BX248334) POSSIBLE OXIDOREDUCTASE [Mycobacterium bovis subsp.
           bovis AF2122/97]
          Length = 748

 Score =  790 bits (2039), Expect = 0.0
 Identities = 405/761 (53%), Positives = 514/761 (67%), Gaps = 28/761 (3%)

>gb|AAK44428.1| (AE006930) molybdopterin oxidoreductase [Mycobacterium tuberculosis
           CDC1551]
          Length = 749

 Score =  782 bits (2020), Expect = 0.0
 Identities = 403/761 (52%), Positives = 511/761 (67%), Gaps = 28/761 (3%)






 
Structural Features:
COG0243, BisC, Anaerobic dehydrogenases, typically selenocysteine-containing 
[Energy production and conversion] 






   
Genomic Context:






   
Comment:


















    ReferenceID:14087




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:17551




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:

















    ReferenceID:36314




  
Author/Investigator(s):
        





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:Misc (text/plain)







    
Data:203_cdd.html


    		




 
URL:









           
Homologs By Global Alignment 

           

       



     
Gene ID:203
           
Identity:

                               
                                   0%
                               
                                   10%
                               
                                   20%
                               
                                   30%
                               
                                   40%
                               
                                   50%
                               
                                   60%
                               
                                   70%
                               
                                   80%
                               
                                   90%
                               
                                   100%
                               
                             

                           

     
HomologID
                           Accession
                           Description
                           Length
                           PctIdentity
                           PctSimilarity
                           Gaps
                           Score
     

     
     
345
                           PA2714_tr
                           translation of PA2714
                           769
                           99.47
                           99.86
                           0
                           3994.0
     

     
     
21724
                           gb|AAG06102.1|AE004699_7
                           (AE004699) probable molybdopterin oxidoreductase [Pseudomonas aeruginosa PAO1]
                           769
                           99.34
                           99.86
                           0
                           3991.0
     

     
     
21725
                           emb|CAD93067.1|
                           (BX248334) POSSIBLE OXIDOREDUCTASE [Mycobacterium bovis subsp. bovis AF2122/97]
                           780
                           52.17
                           66.15
                           43
                           2052.0
     

     
     
21726
                           gb|AAK44428.1|
                           (AE006930) molybdopterin oxidoreductase [Mycobacterium tuberculosis CDC1551]
                           780
                           51.92
                           65.76
                           42
                           2032.0
     

     






      

          
GC ORFID: 43205How Found: BLASTX

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: t_PA2714Glimmer Score: 

          
Start: 2439997Stop: 2442306

          
Length: 2310


          
Start Codon: GTGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: t_PA2714 translation of PA2714Homolog Bit Score 1543.0

          
Other Homologs:  t_PA2714 (ORF: GLIMMER)

          
GC ORF Sequence

           
GTGACTACGCCGTCCCCGCAATGGAAGAAGACCGCCTGTATCCTCTGCAGCCTCAACTGCGGGCTGGAAGTG 
CAGACCGAGAATGGCCGCATCAGCAAGATCCGCGGCGATGACGACCACCCCGCCTCGCAGGGCTACGTCTGC 
GAGAAATCGCAGCGCATGGACTACTACCAGAACGGCGCCGACCGCCTGGACACGCCGATGCGCCGGCGCCCC 
GATGGCAGCTACGAAGCCATCGACTGGGACACGGCGATCCGCGAGGTGGCGGAGAAGTTCCTCGCCATCAAG 
CGCAGGCATGGCGGCGAAAGCATCCTCTACTACGGCGGCGGCGCGCAGGGCAACCACCTCGGCGGCGCCTAC 
GGCGACAGCACGCTGAAGGCCCTCGGGGTGAAGTACCGCTCCAACGCCCTGGCCCAGGAAAAGACCGGCGAG 
TTCTGGGTCCAGGGCAAGATGTTCGGTACCGGCGTGCACGGCGACTTCGAGCATTGCGAGGTGGCCATCCTG 
ATCGGCAAGAATCCCTGGCAATCCCATGGTTTCGCCCGCGCCCGCGTGCTGCTCAACGCCATGGCCAAGGAT 
CCCGCGCGCTCGATCATCGTGATCGACCCGCGCCTGAGCGAAACCGCCGCCCTGGCCGACTTCCACCTGCAG 
ATCCGTCCGGGCACCGACGCCTGGTGCCTGGCGGCGCTGGTCGGGATCATCGTCCAGGACGGGCTGCTGGCG 
CGCGACTGGCTGGCCGAGCACACCAGCGGCTACGAGCACATCGTCGACGAACTGAACGCCATCCCAGTGGCC 
TACTGCGCCGAGACCTGCGGGGTGGCGGAAGACAAGCTGCGCGCCGCCGCCCGGCGGATCGCCAGCGCCAGC 
AGCGTATCGGCGCTGGAAGACCTGGGCATGCAGATGAACCTGCACTCGACCCTCGGCAGCTACCTGCAACGC 
CTGGTCTGGTTGCTCACCGGCCATTACGGGCGCCCCGGCACCAGCAACGCCTTCGTGCCCTTCCTCTCGCTG 
TCCAAGGCCAGCAAGGGCGATACCTCGATGGGCAAGAAGGGCGCGCCACGCGTCGAGAAGCGCAGCCCGGTG 
GCCAACGCCAAGATCATCATCGGCCTGATTCCCTGCAACGTGATTCCAGAGGAAATCCTCACCGACCATCCC 
AAGCGCTATCGCGCCATGCTGGTGGAGACCGGCAACCCGCTGCATTCGCTGGCCGATAGCCAGCGCATGCGC 
GAAGCCATGCGCGCCCTGGAGCTGTCGGTGGTGATCGACGTGGCCATGACCGAGACCGCGCGCCACGCCGAC 
TACGTGCTGCCGGCGGCGAGCCAGTTCGAAAAGGCCGAGGCGACCTTCTTCAACCTGGAATTCCCGCGCAAC 
GCCTTCCATCTGCGCGCGCCGCTGTTCCCGGCGCGCCCCGGCACCCTGCCGGAAGCGGAGATCCACGCCCGC 
CTGCTAGAAGCCATGGGCGTGCTCGGCGAGAAAGACTACCGGCCGCTGCGCCTGGCCCTCAAGCTCGGGCGC 
AAGGCGTTCTCGGCGGCCTTCCTCGCCGCCGCGGCGACCCGCCCCAAGGTCATGAAATACGCGCCGGTCCTG 
CTCTACCGTACCCTCGGCCCGACCCTGCCCGCCGGCATGGAAGCGGCCGCGGCGATCTGGGGCATCTGCCAA 
CTGCACGTGCTGAACAACCGCAAGACCGCTGCCCGCGCCGGCTTCGACGGCTTGCCGCCGCTGGCCGCCGAC 
CGCCTGTTCCAGGCCATGCTCGACAACCCGTCCGGGGTGGTCTTCGCCGAAACCACCCACGCCGAAAGCTGG 
CAGGCCGTCGCCCGTCCCGAACAGCGGATCAACCTGCACATCCCCGAACTGTTGCCGGAACTGGCCAAGCTC 
GCCCACAGCGCGCCACCCCACGATCCGGCCTACCCGTTCATCCTCGCCGCCGGCGAGCGACGCAGCGACACC 
AGCAATACCGCCGTACGCGACACCGGCTGGCACCGCCGCGGGCGCTACGGCACCCTGCGCATCAGTCCGCAG 
GACGCCGAGGCGCTGGGCTGCGCCGACGGCGAGGTGCTGCGCGTGGTGACCCGCCGCGGCGACGTCGAGGCG 
GAAGTGGAGATCAGCGACATGATGCAGCCGGGCAATATCTCCCTGCCCAACGGCCAGGGCCTGGACTACCGC 
AACGCCGAGGGCGAGGTGGTGCGCCGGGGCGTGGCGCCCAACGAGGTGACCGACTGCACCCAGCGCGACTTC 
CTCGCCGGCACGCCCTGGCACAAGTACGTGCCGGCGCGCCTGGAACGGCTGGCGACGCCCGCCGCTACGAAC 
GCCTGA