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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG05632.1|AE004650_3 (AE004650) hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 331/333 (99%), Positives = 332/333 (99%)
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Sequence:
ATGAGCGCAGCGCCACCGGAGATCCCCGCCCTGCCCGCCGGCCTCTGCTACGTCGACGACCGCCAGCCGGGC
ATCCGTCGACGCCGGCAGGGCAAGCGCTTCGTCTATTTCGACGCCGACGGCCAGCGCATCGGCGACGCCGAG
GAAATCCGCCGGCTGGACAAGCTGGCCATTCCGCCGGCCTATCGCGAGGTCTGGATCTGTCCCGACCCCAAC
GGCCATCTCCAGGCCACCGGCCGCGACGCCCGTGGGCGCAAGCAGTACCGCTACCACCCGCGCTGGCGCGAG
GTACGCGATGCCGACAAGTACGAGCGCCTGCTGCGCTTCGGCCAGGCGCTGCCGGGGCTGCGCCGGCACATC
GACGCCCAGTTGCGCCTGCCCGGCCTCGGTCGCGACAAGGTGGTGGCCCTGGCGGTGGCGCTGCTCGACGCC
ACCCTGATCCGCGTCGGCAACCACCGCTACGCCCGCGACAACCGCTCCTACGGCCTGACCACCCTGCGTACC
CGGCACGTCGACGTGAACGGCAGTCGCATCCGGTTCCGCTTCAAGGGCAAGAGCGGCATCGAGCACGACGTC
AGCCTGGAGCATCCGCGCCTGGCGCGGGTGCTGCGGCGCTGCCTGGAACTGCCCGGCCAGGACCTGTTGCAG
TACCTGGACGAGGACGGCCAGCCGCACCGCATCGGCTCCCACGACATCAACGAGTACCTGCGCCGGCACACC
GGCGAGGATTTCAGCGCCAAGGACTACCGCACCTGGGCCGGCAGCGCGCTGGCGCTGGAGCGCCTGCGGCGT
GCCGAAGCCGACGGGCTCGGCGCGGTGGTGGCGGAGGTCGCCGCCGAATTGGGCAACAGCGTGGCGATCTGC
CGGCAATGCTACATCCACCCGGCGATCATCGAGGCCTACCAGGCCGGGCAACTGGGCCAGCTCAGGCGCGCC
CGCAAGCGCCGCTGGCTGAGCGCCGAGGAAGCGACCCTGCTGGCCTTCCTCGACACGCCCGGCTGA |
Translation:
MSAAPPEIPALPAGLCYVDDRQPGIRRRRQGKRFVYFDADGQRIGDAEEIRRLDKLAIPPAYREVWICPDPN
GHLQATGRDARGRKQYRYHPRWREVRDADKYERLLRFGQALPGLRRHIDAQLRLPGLGRDKVVALAVALLDA
TLIRVGNHRYARDNRSYGLTTLRTRHVDVNGSRIRFRFKGKSGIEHDVSLEHPRLARVLRRCLELPGQDLLQ
YLDEDGQPHRIGSHDINEYLRRHTGEDFSAKDYRTWAGSALALERLRRAEADGLGAVVAEVAAELGNSVAIC
RQCYIHPAIIEAYQAGQLGQLRRARKRRWLSAEEATLLAFLDTPG* |
AnnotationID:2022 | GeneID:2013 |
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Modification Date/Time: |
2005-10-10 15:03:43 |
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GeneProduct: | putative DNA topoisomerase |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (11) DNA replication, recombination, modification and repair |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | gi|68345078|gb|AAY92684.1| DNA topoisomerase I, putative [Pseudomonas fluorescens Pf-5]
Length=345
Score = 441 bits (1134), Expect = 2e-122
Identities = 218/330 (66%), Positives = 258/330 (78%), Gaps = 7/330 (2%)
gi|52006475|ref|ZP_00333855.1| COG3569: Topoisomerase IB [Thiobacillus denitrificans ATCC 25259]
Length=356
Score = 409 bits (1050), Expect = 9e-113
Identities = 205/327 (62%), Positives = 245/327 (74%), Gaps = 7/327 (2%)
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Structural Features: | COG3569, Topoisomerase IB [DNA replication, recombination, and repair]
CD-Length = 354 residues, 97.2% aligned
Score = 414 bits (1066), Expect = 6e-117
Identities = 197/344 (57%), Positives = 232/344 (67%), Gaps = 11/344 (3%)
cd00659, Topo_IB_C, DNA topoisomerase IB, C-terminal catalytic domain.
CD-Length = 218 residues, 100.0% aligned
Score = 233 bits (596), Expect = 2e-62
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