ViewGene
Locus Name:
GeneID:
Location:

GeneID:1944
TrivialName: PA14_32140
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_32140
PAO1 Ortholog Locus:PA2514
Sequence Length:1023
Protein Length:340
Start: 2796006
Stop: 2794984
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG05902.1|AE004678_8 (AE004678) anthranilate dioxygenase reductase [Pseudomonas aeruginosa PAO1]
Identities = 337/340 (99%), Positives = 338/340 (99%)
Sequence:
ATGAATCACAAAGTCGCCCTCAGCTTCGCCGACGGCAAGACCCTGTTCCTGCCCGTCGGCCACGACGACCTA
CTCCTCGACGCCGCCCTGCGCCACGGCATCAACCTGCCGCTGGACTGCCGCGAAGGGGTCTGCGGCACCTGC
ATGGGCCGCTGCGAGGCGGGCAGCTACAGCCTGGACTACGCCGACGAGGACACCCTCTCCGCCGCCGACCTG
GAGCAGCGCAAGGTGCTCGCCTGCCAGACCCGGGTGCGCTCCGACGCGGCCTTCTACTTCGACTTCGCCTCG
ACCCTCTGCCACGCCGCCGCGGCCCAGGCGCACAGCGGCGTGGTGCGCGAACTGCGCCTGCTCTCCGAGGAC
ACAGCGCTGCTCCGCCTCGACGCCGGCGCCGCGGGCCGCCAGTTGGACTTCCTGCCCGGCCAGTACGCGCGC
CTGCAAGTACCCGGCAGCGACTGCCGGCGCGCCTACTCCTTCGCCAACCGGCCGAATCCGCAGAACCACCTG
CAGTTCCTCATCCGCCTGCTCCCGGGCGGCGCCATGAGCGACTACCTGCGCCAAGGGTGCCGGGTCGGCGAC
GAGATCCGCTTCGAGGCGCCGCTGGGCACCTTCTACCTGCGTCAGGTGGAGCGCCCGTTGCTGCTGGTGGCC
GGCGGCACCGGCCTGTCGGCGTTCCTCGGCATGCTCGACGAACTGGCCGAGCGCGGCTGCGAGCGGCCGGTG
CATCTCTACTACGGGGTACGCCGCGCCGCCGATCTCTGCGAATTGCAGCGGATCGCCGGCTACGCCGAGCGG
CTTCCCGGCTTCCGCTTCGTCCCGGTGCTCAGCGAGGCGGACGCCGACTGGGACGGCCGGCGCGGCTACCTG
CACGAGCATTTCGACGCCGCCCGCCTGCGCGACGAAGCTTTCGACCTCTACCTGTGCGGGCCGCCGCCGATG
GTCGAGGCGGTCCGCCAGTGGCTGCGCGGGCGCTCCCTGGAGCATCTGCGGCTGTACCTGGAGAAGTTCACC
GAAAGCGGCGACTGA
Translation:
MNHKVALSFADGKTLFLPVGHDDLLLDAALRHGINLPLDCREGVCGTCMGRCEAGSYSLDYADEDTLSAADL
EQRKVLACQTRVRSDAAFYFDFASTLCHAAAAQAHSGVVRELRLLSEDTALLRLDAGAAGRQLDFLPGQYAR
LQVPGSDCRRAYSFANRPNPQNHLQFLIRLLPGGAMSDYLRQGCRVGDEIRFEAPLGTFYLRQVERPLLLVA
GGTGLSAFLGMLDELAERGCERPVHLYYGVRRAADLCELQRIAGYAERLPGFRFVPVLSEADADWDGRRGYL
HEHFDAARLRDEAFDLYLCGPPPMVEAVRQWLRGRSLEHLRLYLEKFTESGD*
AnnotationID:1953GeneID:1944
AnnotatorUID: diggins
Modification Date/Time: 2005-03-06 17:05:01
Gene Name:antC
Confidence Code:2
GeneProduct:anthranilate dioxygenase reductase
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(12) Energy metabolism
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:COG0543,COG1018,COG2871
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:
>gb|AAK52291.1| (AY026914) putative anthranilate dioxygenase reductase AntC
           [Pseudomonas putida]
          Length = 340

 Score =  686 bits (1771), Expect = 0.0
 Identities = 337/340 (99%), Positives = 337/340 (99%)

>dbj|BAB32745.1| (AB047548) reductase component of anthranilate 1,2-dioxygenase
           [Pseudomonas resinovorans]
          Length = 342

 Score =  471 bits (1211), Expect = e-132

>gb|AAC34815.1| (AF071556) anthranilate dioxygenase reductase [Acinetobacter sp.
           ADP1]
          Length = 343

 Score =  429 bits (1104), Expect = e-120
 Identities = 203/338 (60%), Positives = 256/338 (75%)








 
Structural Features:
COG0543, UbiB, 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 
[Coenzyme metabolism / Energy production and conversion]
CD-Length = 252 residues,  80.6% aligned
Score =  180 bits (457), Expect = 2e-46
Identities = 82/214 (38%), Positives = 116/214 (54%), Gaps = 12/214 (5%)

COG1018, Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
[Energy production and conversion]
CD-Length = 266 residues,  86.8% aligned
Score =  136 bits (343), Expect = 5e-33
Identities = 72/238 (30%), Positives = 108/238 (45%), Gaps = 10/238 (4%)

COG2871, NqrF, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF 
[Energy production and conversion]
CD-Length = 410 residues,  90.5% aligned
Score =  117 bits (295), Expect = 2e-27
Identities = 82/385 (21%), Positives = 148/385 (38%), Gaps = 67/385 (17%)






   
Genomic Context:






   
Comment:


















    ReferenceID:3891




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:21038




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:

















    ReferenceID:33063




  
Author/Investigator(s):
        





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:Misc (text/plain)







    
Data:1944_cdd.html


    		




 
URL:

















    ReferenceID:34510




  
Author/Investigator(s):
        Bundy BM, Campbell AL, Neidle EL.





  
Title:
        Similarities between the antABC-encoded anthranilate dioxygenase and the benABC-encoded benzoate dioxygenase of Acinetobacter sp. strain ADP1.




  
PubMed:
        9721284


MedLine:
        




    
Source:
J Bacteriol. 1998 Sep;180(17):4466-74.






    
Reference Type:Journal 







    
Data:


    		




 
URL:http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=9721284









           
Homologs By Global Alignment 

           

       



     
Gene ID:1944
           
Identity:

                               
                                   0%
                               
                                   10%
                               
                                   20%
                               
                                   30%
                               
                                   40%
                               
                                   50%
                               
                                   60%
                               
                                   70%
                               
                                   80%
                               
                                   90%
                               
                                   100%
                               
                             

                           

     
HomologID
                           Accession
                           Description
                           Length
                           PctIdentity
                           PctSimilarity
                           Gaps
                           Score
     

     
     
3401
                           PA2514_tr
                           translation of PA2514
                           340
                           99.11
                           99.41
                           0
                           1774.0
     

     
     
104995
                           gb|AAG05902.1|AE004678_8
                           (AE004678) anthranilate dioxygenase reductase [Pseudomonas aeruginosa PAO1]
                           340
                           99.11
                           99.41
                           0
                           1774.0
     

     
     
104996
                           gb|AAK52291.1|
                           (AY026914) putative anthranilate dioxygenase reductase AntC [Pseudomonas putida]
                           340
                           99.11
                           99.11
                           0
                           1771.0
     

     
     
104997
                           dbj|BAC41524.1|
                           (AB088420) reductase component of anthranilate [Pseudomonas resinovorans]
                           341
                           68.32
                           80.93
                           1
                           1263.0
     

     
     
104998
                           dbj|BAB32745.1|
                           (AB047548) reductase component of anthranilate 1,2-dioxygenase [Pseudomonas resinovorans]
                           342
                           66.95
                           78.94
                           2
                           1214.0
     

     






      

          
GC ORFID: 44946How Found: BLASTX

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: t_PA2514Glimmer Score: 

          
Start: 2157918Stop: 2158940

          
Length: 1023


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: t_PA2514 translation of PA2514Homolog Bit Score 687.0

          
Other Homologs:  t_PA2516 (ORF: BLASTX 299.0), t_PA2514 (ORF: GLIMMER)

          
GC ORF Sequence

           
ATGAATCACAAAGTCGCCCTCAGCTTCGCCGACGGCAAGACCCTGTTCCTGCCCGTCGGCCACGACGACCTA 
CTCCTCGACGCCGCCCTGCGCCACGGCATCAACCTGCCGCTGGACTGCCGCGAAGGGGTCTGCGGCACCTGC 
ATGGGCCGCTGCGAGGCGGGCAGCTACAGCCTGGACTACGCCGACGAGGACACCCTCTCCGCCGCCGACCTG 
GAGCAGCGCAAGGTGCTCGCCTGCCAGACCCGGGTGCGCTCCGACGCGGCCTTCTACTTCGACTTCGCCTCG 
ACCCTCTGCCACGCCGCCGCGGCCCAGGCGCACAGCGGCGTGGTGCGCGAACTGCGCCTGCTCTCCGAGGAC 
ACAGCGCTGCTCCGCCTCGACGCCGGCGCCGCGGGCCGCCAGTTGGACTTCCTGCCCGGCCAGTACGCGCGC 
CTGCAAGTACCCGGCAGCGACTGCCGGCGCGCCTACTCCTTCGCCAACCGGCCGAATCCGCAGAACCACCTG 
CAGTTCCTCATCCGCCTGCTCCCGGGCGGCGCCATGAGCGACTACCTGCGCCAAGGGTGCCGGGTCGGCGAC 
GAGATCCGCTTCGAGGCGCCGCTGGGCACCTTCTACCTGCGTCAGGTGGAGCGCCCGTTGCTGCTGGTGGCC 
GGCGGCACCGGCCTGTCGGCGTTCCTCGGCATGCTCGACGAACTGGCCGAGCGCGGCTGCGAGCGGCCGGTG 
CATCTCTACTACGGGGTACGCCGCGCCGCCGATCTCTGCGAATTGCAGCGGATCGCCGGCTACGCCGAGCGG 
CTTCCCGGCTTCCGCTTCGTCCCGGTGCTCAGCGAGGCGGACGCCGACTGGGACGGCCGGCGCGGCTACCTG 
CACGAGCATTTCGACGCCGCCCGCCTGCGCGACGAAGCTTTCGACCTCTACCTGTGCGGGCCGCCGCCGATG 
GTCGAGGCGGTCCGCCAGTGGCTGCGCGGGCGCTCCCTGGAGCATCTGCGGCTGTACCTGGAGAAGTTCACC 
GAAAGCGGCGACTGA