|
|
|
Modification Date/Time: | 2006-04-06 13:01:23 |
|
|
|
|
|
|
|
|
|
|
|
|
Missense Discrepancy: | FALSE |
|
Comments: Homology: gb|AAG07214.1|AE004800_3 (AE004800) conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 355/355 (100%), Positives = 355/355 (100%)
|
Sequence:
ATGGTTAAGCTCGATCGTTACATCGGTGTCACCGTCTTCGTCGCGATCCTCGCGGTGCTCGGGGTGATCCTC
GGCCTGGCGCTGCTGTTCGCCTTCATCGACGAACTCAACGACATCAGCGCCAGCTACGGCATTGGCGATGCC
CTGCGCTTCATCTTCCTCACCGCGCCACGGCGCGCCTACGACATGCTGCCGATGGCGGCGCTGATCGGCTGC
CTGGTCGGCCTCGGCACCCTGGCCAGCAACAGCGAACTGACCATCATGCGCGCGGCCGGGGTATCCCTGTCG
CGGATCGTCTGGGCGGTGATGAAACCGATGCTGGTGCTGATGCTGGCCGGCATCCTGGTTGGCGAGTACGTC
GCGCCCTGGACCGAGAACATCGCCCAGAGCGGCCGCGCCCTGGCCCAGGGCGGCGGCGATTCGCAAAGCTCC
AAGCGCGGTCTGTGGCATCGCCAGGGGCGCGAGTACATCCACATCAACGCGGTGCAGCCCAATGGCGTGCTG
TACGGCGTGACCCGCTACCGCTTCGACGAGCAGCGTGGCCTGGAATCGGCCAGTTTCGCCAAGCGCGCGCGC
TTCGAGACCGATCACTGGCAACTGGAAGAGGTCACCACCACCTTGCTGCATCCGAGGGAAAAGCGCTCCGAG
GTGGTCAAGCTGCCGACCGAACGCTGGGATGCCCAGCTCAGCCCGCAACTGCTGAACACTGTGGTGATGGAG
CCAGAGGCGCTGTCTATCAGCGGTCTATGGCAGTACATCCACTATCTCGCCGACCAGGGCCTGAACAACAAC
CGCTACTGGCTGGCGTTCTGGACCAAGGTCCTGCAACCGCTGGTGACCGCCGCGCTGGTGCTGATGGCGATT
TCCTTCATCTTCGGTCCGTTGCGCTCGGTGACCCTGGGCCAGCGGATCTTCACCGGCGTGCTGGTGGGCTTC
GTCTTCCGCATCGCCCAGGACCTGCTCGGACCCTCCAGCCTGGTGTTCGACTTCCCGCCGCTGCTGGCGGTG
GTGATCCCCGCCTCGATCTGCGCACTGGCGGGTGTCTGGCTGCTACGCCGGGCGGGCTGA |
Translation:
MVKLDRYIGVTVFVAILAVLGVILGLALLFAFIDELNDISASYGIGDALRFIFLTAPRRAYDMLPMAALIGC
LVGLGTLASNSELTIMRAAGVSLSRIVWAVMKPMLVLMLAGILVGEYVAPWTENIAQSGRALAQGGGDSQSS
KRGLWHRQGREYIHINAVQPNGVLYGVTRYRFDEQRGLESASFAKRARFETDHWQLEEVTTTLLHPREKRSE
VVKLPTERWDAQLSPQLLNTVVMEPEALSISGLWQYIHYLADQGLNNNRYWLAFWTKVLQPLVTAALVLMAI
SFIFGPLRSVTLGQRIFTGVLVGFVFRIAQDLLGPSSLVFDFPPLLAVVIPASICALAGVWLLRRAG* |
AnnotationID:1912 | GeneID:1903 |
|
Modification Date/Time: |
2005-04-24 20:08:06 |
|
|
|
GeneProduct: | putative permease |
|
|
|
Cell Localization Confidence Code: | 5 |
|
|
Functional Category: | (15) Membrane proteins |
|
Alternate Gene Product Name: | |
|
Functional Category Confidence Code: | 5 |
|
|
Secondary Functional Category(ies): | |
|
|
|
|
Homology: | >gb|AAO54798.1| (AE016860) membrane protein, putative [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 353
Score = 537 bits (1383), Expect = e-152
Identities = 262/355 (73%), Positives = 311/355 (87%), Gaps = 2/355 (0%)
>gb|AAP43525.1| (AY283772) YjgQ [Escherichia coli B]
Length = 360
Score = 263 bits (671), Expect = 2e-69
Identities = 140/356 (39%), Positives = 217/356 (60%), Gaps = 10/356 (2%)
|
|
Structural Features: | pfam03739, YjgP_YjgQ, Predicted permease YjgP/YjgQ family
CD-Length = 350 residues, 100.0% aligned
Score = 216 bits (552), Expect = 6e-57
Identities = 113/353 (32%), Positives = 168/353 (47%), Gaps = 8/353 (2%)
COG0795, Predicted permeases
CD-Length = 364 residues, 98.9% aligned
Score = 214 bits (545), Expect = 4e-56
Identities = 120/361 (33%), Positives = 179/361 (49%), Gaps = 9/361 (2%) |
|
|
|
|
|