|
|
|
Modification Date/Time: | 2006-04-06 13:01:23 |
|
|
|
|
|
|
|
|
|
|
|
|
Missense Discrepancy: | FALSE |
|
Comments: Homology: gb|AAG08052.1|AE004880_8 (AE004880) peptide chain release factor 1 [Pseudomonas aeruginosa PAO1]
Identities = 359/360 (99%), Positives = 360/360 (100%)
|
Sequence:
ATGAAAGCTTCTCTGCTGAAAAAGCTGGATGTCCTCAGCGATCGCTACGAAGAACTGACGGCGCTGCTCGGC
GACGCCGAGGTGATCAGTGACCAGACCCGCTTCCGCGCCTATTCCCGCGAGTACGCCGAGGTCGAACCGGTG
ATCCTGGCGTTCCGCGACTACCGCAAGGTGCAGGCCGACCTCGAGGGCGCCCAGGCGTTGCTCAAGGACAGC
GACCCGGAGTTGCGCGACCTCGCCGAGGAGGAGGTCGCCGAAGCGCGCGGCCGCCTCGCCGCCCTCGGCGAC
AGCCTGCAGCGCATGCTGCTGCCGAAGGATCCCAACGACAGCCGCAACGTGTTCCTGGAGATCCGTGCCGGC
ACCGGTGGCGACGAGGCGGCGATCTTCTCCGGCGACCTGTTCCGCATGTATTCGCGCTACGCCGAGCGCCAG
GGCTGGCGGGTCGAGACGCTGTCGGAGAACGAGGGCGAGCACGGTGGCTACAAGGAAGTGATTGCCCGGGTC
GAGGGCGACAACGTTTATGCCAAGCTCAAGTTCGAGTCCGGCGCGCACCGCGTGCAGCGGGTGCCGGAAACC
GAATCCCAGGGCCGGATCCACACTTCCGCCTGCACTGTCGCGGTGCTGCCGGAGCCGGACGAGCAGGCAGCG
ATCGAGATCAACCCGGCCGACCTGCGGGTGGACACCTACCGTTCCTCCGGCGCCGGCGGCCAGCACGTCAAC
AAGACCGACTCGGCGGTGCGCATCACCCACATTCCCAGCGGCATCGTGGTCGAGTGCCAGGAAGAGCGCTCG
CAGCACAAGAACCGCGCCAAGGCCATGGCCTGGCTGGCGGCCAAGCTCAACGACCAGCAGCAGGCCGCGGCG
CAGCAGGCGATCGCCAGCACGCGCAAGCTGCTGGTGGGCTCGGGCGACCGCTCGGAGCGCATCCGTACCTAC
AACTTCCCGCAAGGGCGGGTCACCGACCATCGCATCAACCTCACCCTGTACTCCCTGGGCGAGGTGATGGAG
GGCGCGGTGGAACAGGTGATCGAGCCGCTGCTGCAGGAATACCAGGCCGATCAACTGGCGGCCCTGGGCGAC
TGA |
Translation:
MKASLLKKLDVLSDRYEELTALLGDAEVISDQTRFRAYSREYAEVEPVILAFRDYRKVQADLEGAQALLKDS
DPELRDLAEEEVAEARGRLAALGDSLQRMLLPKDPNDSRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERQ
GWRVETLSENEGEHGGYKEVIARVEGDNVYAKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAA
IEINPADLRVDTYRSSGAGGQHVNKTDSAVRITHIPSGIVVECQEERSQHKNRAKAMAWLAAKLNDQQQAAA
QQAIASTRKLLVGSGDRSERIRTYNFPQGRVTDHRINLTLYSLGEVMEGAVEQVIEPLLQEYQADQLAALGD
* |
AnnotationID:1901 | GeneID:1892 |
|
Modification Date/Time: |
2005-03-08 06:06:22 |
|
|
|
GeneProduct: | peptide chain release factor 1 |
|
|
|
Cell Localization Confidence Code: | 5 |
|
|
Functional Category: | (26) Translation, post-translational modification, degradation |
|
Alternate Gene Product Name: | |
|
Functional Category Confidence Code: | 5 |
|
|
Secondary Functional Category(ies): | translation, ribosomal structure and biogenesis |
|
|
|
|
Homology: | >gb|AAN66358.1|AE016264_2 (AE016776) peptide chain release factor 1 [Pseudomonas putida
KT2440]
Length = 360
Score = 614 bits (1584), Expect = e-175
Identities = 303/360 (84%), Positives = 335/360 (93%)
>gb|AAO54638.1| (AE016859) peptide chain release factor 1 [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 360
Score = 613 bits (1580), Expect = e-175
Identities = 307/360 (85%), Positives = 331/360 (91%)
>gb|AAC43437.1| (U18555) peptide chain release factor 1 [Escherichia coli]
Length = 360
Score = 488 bits (1255), Expect = e-137
Identities = 238/360 (66%), Positives = 298/360 (82%), Gaps = 2/360 (0%)
|
|
Structural Features: | COG0216, PrfA, Protein chain release factor A
[Translation, ribosomal structure and biogenesis]
CD-Length = 363 residues, 99.7% aligned
Score = 554 bits (1429), Expect = 7e-159
Identities = 239/362 (66%), Positives = 291/362 (80%), Gaps = 2/362 (0%)
|
|
|
|
|
|