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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG06557.1|AE004741_2 (AE004741) probable initiation factor 2 subunit [Pseudomonas aeruginosa PAO1]
Identities = 358/358 (100%), Positives = 358/358 (100%)
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Sequence:
ATGCGAGAGCGACTGCTGGCGGCCGAGCGGGTCAAGGCGATCGAGTGGCGGGACGGTACGCTGCGGTTGCTG
GATCAGCGCCTGCTGCCCCAGGAGGAGGTCTGGCTCGAACATGAGTCGGCGGCCGAGGTGGCCAAGGCCATT
CGCGATATGGTCGTGCGCGGCGCGCCGGCCATCGGCATCAGCGCCGCCTACGGCATCGTCCTTGGCGCCCGC
GCGCGCCTGGCGCAGGGCGGCGACTGGCGCGCCGCGCTGGAGGAGGACTTCCGCCTGCTGGCCGACTCGCGA
CCCACGGCGGTCAACCTGTTCTGGGCGCTGAACCGCATGCGCGACCGTCTGGAGCGAATGAAAGAGGGCGAC
CAGCCGCTGGCGGTGCTGGAAGCCGAGGCGATCTCCATCCATGAAAGCGACCGCGAGGCCAACCTGACCATG
GCCCAGTTGGGCATGGAGCTGATCCGCAAGCAGCAGGGCAGCCCGCAGAACATCCTCACCCACTGCAATACC
GGCGCCCTGGCGACCGGCGGGTTCGGCACCGCGCTGGGGGTGATCCGCGCCGCGCACCTGGAAGGCCTGGTC
AATCGCATCTACGCCGACGAAACCCGGCCCTGGCTCCAGGGCTCGCGGCTGACCGCTTGGGAACTGGCCAAC
GAAGGCATCCCGGTCAGCCTGAACGTGGATTCGGCCGCCGCGCACCTGATGAAGACCGAGAACATCACCTGG
GTCATCGTCGGCGCCGACCGCATCACCGCCAATGGCGATGTCGCCAACAAGATCGGCACCTACCAGTTGGCA
GTCAACGCCATGCACCACGGCGTGCGCTTCATGGTGGTGGCGCCGAGTTCGACCATCGACATGAACCTGGAG
AGCGGCGAGGACATCCCGATCGAAGAGCGCGACGGTCGCGAACTGCTGGAAATCGGCGGGCGACGGGTGGCG
GCCGAGGTCGATGCCTACAATCCGGTATTCGACGTGACCCCGGCGGACCTTATCGATGCCATCGTGACCGAG
CGTGGCGTCGTCGAGCGTCCCGACGCCGAGCGCATGGCCGCCCTGATGAGCCGCAAGCGCCTGCATTGA |
Translation:
MRERLLAAERVKAIEWRDGTLRLLDQRLLPQEEVWLEHESAAEVAKAIRDMVVRGAPAIGISAAYGIVLGAR
ARLAQGGDWRAALEEDFRLLADSRPTAVNLFWALNRMRDRLERMKEGDQPLAVLEAEAISIHESDREANLTM
AQLGMELIRKQQGSPQNILTHCNTGALATGGFGTALGVIRAAHLEGLVNRIYADETRPWLQGSRLTAWELAN
EGIPVSLNVDSAAAHLMKTENITWVIVGADRITANGDVANKIGTYQLAVNAMHHGVRFMVVAPSSTIDMNLE
SGEDIPIEERDGRELLEIGGRRVAAEVDAYNPVFDVTPADLIDAIVTERGVVERPDAERMAALMSRKRLH* |
AnnotationID:1899 | GeneID:1890 |
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Modification Date/Time: |
2005-04-13 13:01:52 |
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GeneProduct: | putative initiation factor 2 subunit |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (26) Translation, post-translational modification, degradation |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAO55264.1| (AE016862) initiation factor 2 subunit family [Pseudomonas syringae
pv. tomato str. DC3000]
Length = 358
Score = 586 bits (1511), Expect = e-167
Identities = 292/358 (81%), Positives = 324/358 (90%)
>gb|AAN67386.1|AE016365_1 (AE016780) initiation factor 2 subunit family [Pseudomonas putida
KT2440]
Length = 358
Score = 505 bits (1300), Expect = e-142
Identities = 252/358 (70%), Positives = 296/358 (82%)
>gb|AAF85350.1|AE004062_5 (AE004062) initiation factor eIF-2B, alpha subunit-related [Xylella
fastidiosa 9a5c]
Length = 354
Score = 332 bits (852), Expect = 2e-90
Identities = 188/344 (54%), Positives = 231/344 (67%), Gaps = 8/344 (2%)
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Structural Features: | pfam01008, IF-2B, Initiation factor 2 subunit family.
CD-Length = 304 residues, 97.0% aligned
Score = 271 bits (693), Expect = 1e-73
Identities = 141/301 (46%), Positives = 178/301 (59%), Gaps = 9/301 (2%)
COG0182, Predicted translation initiation factor 2B subunit,
eIF-2B alpha/beta/delta family
[Translation, ribosomal structure and biogenesis]
CD-Length = 346 residues, 99.7% aligned
Score = 465 bits (1197), Expect = 5e-132
Identities = 198/349 (56%), Positives = 250/349 (71%), Gaps = 8/349 (2%) |
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