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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG08647.1|AE004938_9 (AE004938) alginate biosynthesis protein AlgZ/FimS [Pseudomonas aeruginosa PAO1]
Identities = 358/358 (100%), Positives = 358/358 (100%)
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Sequence:
ATGCCTATCCGATTCAAGCCCGGCCGCTCGACCCGGCCGGCCGTCCAAGACGACTTCTTCATTCCCGAGCTC
TGCGAAGCCGAAGCCCTGTTCACCCTGGTGCTGCTGGCGGAGCTGCTGGTGCTGGTGCTGGTGCTGGCGGAG
CCGATGACGCCGAGCTTCAACTGGGTGCGCCTGGCCCTGGCGTCGCTGTTCGTGCAGTGGATCGTACTGCTC
TCGGCGGCGCTGTTCTGCCGCCTGCGGCCATTGCTCGCGCGCCTGCCGGTGGCGCTGGCGGGGAGTGCCTGC
TGCCTGTTGGTGGTGGCCCTCACCCTGGGCTGCACGGCGGTCGCCGAGCACTATCAGCTGGGCGGAGAACTG
ACGCGTGCCGGCGAGGTCAATCTGTATCTGCGGCACGCGCTGATCGCGCTGATCATGTCCGCCCTGGTGCTG
CGCTACTTTTACCTGCAGAGCCAGTGGCGCCGGCAGCAGCAGGCCGAGTTGCAGGCGCGCCTGGAGTCGCTG
CAGGCGCGGATTCGCCCGCACTTCCTGTTCAACAGCCTGAACAGCATCGCCAGCCTGATCGAGCTGGACCCG
CTGAAGGCCGAGCATGCGGTGCTGGACCTGTCCGACCTGTTCCGGGCCAGCCTGGCGAAGCCCGGCACTTTA
GTTTCCTGGGAGGAGGAACTGGCGCTGGCAAGGCGCTATCTTTCCATTGAGCAGTATCGTCTTGGCGATCGC
CTGCAACTGGACTGGCAGGTGCACGGGGTGCCGGCCAACCTGCCGATCCCCCAACTGACCTTGCAGCCGCTG
CTGGAAAATGCGCTTATCTATGGCATCCAGCCGCGGGTCGAAGGTGGCCTGGTGCAGGTCGAGGCGGTTTAT
CGTGAAGGAGTGTTCCAGCTATGTGTGAGCAACCCCTACGACGAGGCGCTCGAGTCGCCCCCGTCGAAAGGC
ACGCGACAGGCGTTACACAATATCGATGCACGACTTGGGGCACTTTTCGGGCCTAAAGCGAGTCTCAGCGTC
GAGCGCCGTGACGGACGGCACTACACCTGTCTACGCTATCCATGTGCGCGACTCATGCAGGAAGCCTGA |
Translation:
MPIRFKPGRSTRPAVQDDFFIPELCEAEALFTLVLLAELLVLVLVLAEPMTPSFNWVRLALASLFVQWIVLL
SAALFCRLRPLLARLPVALAGSACCLLVVALTLGCTAVAEHYQLGGELTRAGEVNLYLRHALIALIMSALVL
RYFYLQSQWRRQQQAELQARLESLQARIRPHFLFNSLNSIASLIELDPLKAEHAVLDLSDLFRASLAKPGTL
VSWEEELALARRYLSIEQYRLGDRLQLDWQVHGVPANLPIPQLTLQPLLENALIYGIQPRVEGGLVQVEAVY
REGVFQLCVSNPYDEALESPPSKGTRQALHNIDARLGALFGPKASLSVERRDGRHYTCLRYPCARLMQEA* |
AnnotationID:1883 | GeneID:1874 |
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Modification Date/Time: |
2005-03-16 07:07:11 |
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GeneProduct: | alginate biosynthesis protein AlgZ/FimS |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (23) Secreted Factors (toxins, enzymes, alginate) |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | Two-component regulatory systems |
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Homology: | >gb|AAO53680.1| (AE016856) alginate biosynthesis protein AlgZ/FimS [Pseudomonas
syringae pv. tomato str. DC3000]
Length = 360
Score = 494 bits (1271), Expect = e-139
Identities = 256/357 (71%), Positives = 292/357 (81%), Gaps = 1/357 (0%)
>gb|AAD31822.1|AF131199_1 (AF131199) cognate sensor kinase [Pseudomonas syringae pv.
syringae]
Length = 194
Score = 295 bits (756), Expect = 2e-79
Identities = 149/191 (78%), Positives = 164/191 (85%)
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Structural Features: | pfam06580, His_kinase, Histidine kinase.
CD-Length = 83 residues, 100.0% aligned
Score = 102 bits (257), Expect = 5e-23
Identities = 42/83 (50%), Positives = 54/83 (65%) |
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