Modification Date/Time: 2006-04-06 13:01:23
Missense Discrepancy: FALSE
Comments:Homology: gb|AAG05275.1| AE004614_9 (AE004614) DNA polymerase II [Pseudomonas aeruginosa PAO1]
Identities = 783/787 (99%), Positives = 785/787 (99%)
Sequence:
GTGGAGTTACTGCAAGGGTTCGTCCTGACCCGGCACTGGCGCGATACGCCGGCCGGCACGGAAGTCGCGTTC
TGGCTGGCGACCGAGCAGGGCCCGCGGCAGGTGCGGCTGCCGCCGCAGCCGTCGGTGGCGTTCGTCCTCGCC
GAGCAGCGCGGGCGCGTCGAGTCCCTGCTCGCCGGGGAGACTGGCGCCGAGCTGCGGCCGCTGGCGCTGCGC
GACTTCCAGCAGCGGCCGGTGCTCGGCCTGTACTGCCAGCAGCATCGCCAACTGATGAATCTGGAGAAACGC
TTGCGCCAGGCCGGCGTCGAGGTGTTCGAGGCCGATATCCGGCCGCCGGAGCGCTACCTGATGGAGCGCTTC
ATCACCGCGCCGGTCAGCCTGGAGGCGAGTGTCGAGGCTGACGGCAGCCTGCTCGCCCGGCGCCTGAAGCCG
GCTCCGGACTATCGCCCGCGCCTGCGCCTGGTGTCGCTGGACATCGAGACCAACGCCCGCGGCGATCTCTAC
TCCATCGCCCTGGAAGGCTGCGGCCAGCGCCAGGTATACATGCTCGGCCCGGCCAACGGCGATGCCGCGGCC
GTGGATTTCTGCCTCGACTATTGCGACAGCCGTGCCGGGCTGCTGGAACGTCTCAACCAGTGGCTGGCCGAG
CACGATCCCGACGCCATCATCGGCTGGAACCTGGTGCAGTTCGACCTGCGCGTCCTGCATGAGCATGCCCAG
CGCCTGAAGGTGCCGCTGCGCCTGGGGCGTGGCGGCGACGAAATGGGCTGGCGCGAGCACGGCAGCCGCAAC
AACCACTTTTTCGCCGCGGCGGCCGGCCGCCTGATCATCGATGGCATCGAGGCGCTGCGCTCGGCGACCTGG
AGTTTCCCCTCGTTCAGCCTGGAGAACGTCGCCCGGACCCTGCTCGGCGAAGGCAAGGCGATCGACAATCCA
TACCAGCGGATGGACGAGATCGATCGCATGTTCGCCGAGGACAAGCCGGCCCTCGCGCATTACAACCTGAAG
GACTGCGAACTGGTGACGCGGATCTTCGCCCGTACCGAACTGCTCGACTTCCTCCTCGAACGGGCCACCGTC
ACCGGCCTGCCGGCGGACCGCAGCGGCGGCTCGGTGGCGGCCTTCACCCACCTGTACATGCCGTTGATGCAC
CGTGCCGGCTTCGTCGCCCCGAACCTCGGCGAGAAGCGTCCGGAAGCCAGTCCCGGCGGCTTCGTCATGGAC
TCGCGGCCGGGCCTCTACGAATCGGTGCTGGTGCTCGACTACAAGAGCCTGTATCCGTCGATCATCCGTACC
TTCCTGATCGACCCGGTCGGCCTGGTGGAAGGCCTGCGCCAGCCGGACGACGAACACTCGGTGGAAGGTTTT
CGCGGCGCCCGTTTCTCGCGTACCCGGCATTGCCTGCCGGCCATCGTCGCACGGGTCTGGGAGGGCCGCGAG
GCGGCCAAGCGCGAACGCAACCAGCCGCTCTCGCAGGCGTTGAAGATCATCATGAACGCCTTCTACGGGGTG
CTGGGCTCCAGCGGCTGCCGCTTCTTCGACCCGCGCCTGGCCTCGTCCATCACCCTGCGCGGGCATCGGATC
ATGCGCCGTACCCGCGAGCTGATCGAGGCCGAGGGCTATACGGTGATCTATGGCGATACCGACTCCACCTTC
GTCTGGCTCGGCAGCCCCCGCGCCGAGGAGGAGGCCTCGGCCATCGGCCGGGCGCTGGTGGCGCGGGTCAAC
GACTGGTGGCGCGAGCACCTGAAAGAAGAATTCGGCCTCGACAGCGCCCTCGAGCTGCAATTCGAGACCCAT
TACCGGCGTTTTCTCATGCCCACCGTGCGCGGCGCCGAGGAGGGCAGCAAGAAACGCTACGCCGGCCTGGTG
CGCCGCGCCGACGGTGGCGAGGAGATGGTCTTCAAGGGCCTGGAGACCGTGCGCACCGACTGGTCGCCGCTG
GCCCAGCGCTTCCAGCAGGAACTCTACCTGCGCATCTTCAACCGCCAGCCCTACCAGGACTACGTGCGCGAT
TACGTACGACGGACCCTGGCCGGCGAGCTGGACGACCTGCTGGTCTACCGCAAGCGCCTGCGCCGGCGCCTC
GACGATTACCAGCGCAACGTGCCGCCGCATGTGCGCGCGGCGCGCATCGCCGACGACTACAACCTCGAGCGC
GGGCGCCCGCGGCAATACCAGAGCGGCGGCTGGATCAGCTACGTGATCAGCGTCGCCGGTCCCGAGCCGCTC
GAGGCGCGGCGTGCGGCCATCGACTACGAGCACTATGTGGGCAAGCAGTTGCAGCCGGTGGCCGACGCCATC
CTGCCGTTCGTCGGCGACGATTTCGCCACTTTGGTCGACCGGCAGATGGCACTATTCTGA
Translation:
MELLQGFVLTRHWRDTPAGTEVAFWLATEQGPRQVRLPPQPSVAFVLAEQRGRVESLLAGETGAELRPLALR
DFQQRPVLGLYCQQHRQLMNLEKRLRQAGVEVFEADIRPPERYLMERFITAPVSLEASVEADGSLLARRLKP
APDYRPRLRLVSLDIETNARGDLYSIALEGCGQRQVYMLGPANGDAAAVDFCLDYCDSRAGLLERLNQWLAE
HDPDAIIGWNLVQFDLRVLHEHAQRLKVPLRLGRGGDEMGWREHGSRNNHFFAAAAGRLIIDGIEALRSATW
SFPSFSLENVARTLLGEGKAIDNPYQRMDEIDRMFAEDKPALAHYNLKDCELVTRIFARTELLDFLLERATV
TGLPADRSGGSVAAFTHLYMPLMHRAGFVAPNLGEKRPEASPGGFVMDSRPGLYESVLVLDYKSLYPSIIRT
FLIDPVGLVEGLRQPDDEHSVEGFRGARFSRTRHCLPAIVARVWEGREAAKRERNQPLSQALKIIMNAFYGV
LGSSGCRFFDPRLASSITLRGHRIMRRTRELIEAEGYTVIYGDTDSTFVWLGSPRAEEEASAIGRALVARVN
DWWREHLKEEFGLDSALELQFETHYRRFLMPTVRGAEEGSKKRYAGLVRRADGGEEMVFKGLETVRTDWSPL
AQRFQQELYLRIFNRQPYQDYVRDYVRRTLAGELDDLLVYRKRLRRRLDDYQRNVPPHVRAARIADDYNLER
GRPRQYQSGGWISYVISVAGPEPLEARRAAIDYEHYVGKQLQPVADAILPFVGDDFATLVDRQMALF*
AnnotationID:195 GeneID:185
Modification Date/Time:
2005-04-28 14:02:24
GeneProduct: DNA polymerase II
Cell Localization Confidence Code: 5
Functional Category: (11) DNA replication, recombination, modification and repair
Alternate Gene Product Name:
Functional Category Confidence Code: 5
Secondary Functional Category(ies):
Homology: >gb|AAO56125.1| (AE016865) DNA polymerase II [Pseudomonas syringae pv. tomato str.
DC3000]
Length = 787
Score = 1321 bits (3418), Expect = 0.0
Identities = 639/787 (81%), Positives = 707/787 (89%)
>gb|AAN68005.1| AE016432_14 (AE016783) DNA polymerase II [Pseudomonas putida KT2440]
Length = 786
Score = 1213 bits (3138), Expect = 0.0
Identities = 601/787 (76%), Positives = 662/787 (84%), Gaps = 1/787 (0%)
>gb|AAM87203.1| AE013968_5 (AE013968) DNA polymerase II [Yersinia pestis KIM]
Length = 789
Score = 1199 bits (3103), Expect = 0.0
Identities = 584/785 (74%), Positives = 671/785 (85%), Gaps = 3/785 (0%)
Structural Features: COG0417 , PolB, DNA polymerase elongation subunit (family B)
[DNA replication, recombination, and repair]
CD-Length = 792 residues, 98.9% aligned
Score = 620 bits (1600), Expect = 2e-178
Identities = 290/812 (35%), Positives = 403/812 (49%), Gaps = 58/812 (7%)
pfam00136 , DNA_pol_B, DNA polymerase family B.
CD-Length = 458 residues, 99.1% aligned
Score = 232 bits (593), Expect = 1e-61
Identities = 126/478 (26%), Positives = 193/478 (40%), Gaps = 84/478 (17%)