ViewGene

Locus Name:
GeneID:
Location:

GeneID:181
TrivialName: PA14_30290
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_30290
PAO1 Ortholog Locus:PA2615
Sequence Length:2436
Protein Length:811
Start: 2622671
Stop: 2625106
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG06003.1|AE004690_3 (AE004690) cell division protein FtsK [Pseudomonas aeruginosa PAO1]
Identities = 809/811 (99%), Positives = 809/811 (99%)
Sequence:
GTGCGCAGGAAAAATAGCGATTTGAAGGATTCGACCACCGCGAGCCATGCCGCCGCATGGCGTCAGCAACTG
CATTCCCGCCTGAAGGAAGGGGTCCTGATCGCGCTGGGCGCGCTCTGCCTCTACTTGTGGATGGCTCTGCTC
ACCTATGACCCGGCCGATCCGAGCTGGAGTCACTCGAGCCAGGTTGACCAGGTGCAGAATGCCGCCGGTCGG
CTCGGTGCGGTATCCGCCGATATCCTGTTCATGACGCTCGGCTACTTCGCCTACCTCTTTCCGCTGTTGCTG
GGCATCAAGACTTGGCAGGTATTCCGCCGCCGCAACCTGCCGTGGGAATGGAACACCTGGCTGTTTTCCTGG
CGCCTGGTCGGGCTGATCTTCCTGATCCTGGCCGGCTCGGCACTGGCCTACATCCATTTCCACGCCAGCGGC
CACATGCCGGCCAGCGCCTCGGCCGGCGGCGCCATCGGCCAGAGCCTGGGCCGCGTCGCGGTGGATGCGCTG
AACGTGCAGGGCAGCACGCTGGTGTTCTTCGCCCTGTTCCTCTTCGGCCTGACGGTGTTCGCCGACCTCTCC
TGGTTCAAGGTGATGGATGTCACCGGCAAGATCACCCTGGACTTCTTCGAACTGATCCAGAACGCCTTCAAT
CGCTGGATGGGCGCGCGCGCCGAGCGCAAGCAACTGGTCGCGCAACTGCGCGAGGTCGACGAGCGCGTCGCC
GAGGTGGTGGCGCCGAGCGTGCCGGACCGCCGCGAACAGTCCAAGGCCAAGGAGCGCCTGCTGGAACGCGAA
GAGGCCCTGGCCAAGCACATGAGCGAGCGGGAGAAGCGCCCGCCGCCGAAGATCGATCCGCCACCGCCTCCG
AAGGCCCCGGAGCCGAGCAAGCGCGTGCTGAAAGAGAAGCAGGCGCCGCTGTTCGTCGATACGGCGGTGGAG
GGCACCCTGCCGCCGCTGTCGCTGCTCGACCCGGCGGAAGTGAAGCAGAAGAGCTACTCGCCCGAGTCGCTG
GAGGCGATGTCGCGCCTGCTGGAGATCAAGCTGAAGGAGTTCGGCGTCGAGGTCAGCGTGGATTCGGTGCAT
CCGGGCCCCGTGATCACCCGTTTCGAGATCCAGCCCGCGGCGGGGGTCAAGGTCAGCCGCATTTCCAACCTG
GCCAAGGACCTGGCGCGCTCGTTGGCGGTGATCAGCGTGCGGGTGGTGGAAGTGATTCCCGGCAAGACCACC
GTCGGCATCGAGATTCCCAATGAAGACCGGCAGATGGTGCGCTTCTCCGAAGTGCTGTCGTCGCCGGAGTAC
GACGAGCACAAGTCCACCGTGCCGCTGGCCCTGGGCCACGACATCGGCGGTCGGCCGATCATCACCGACCTG
GCGAAGATGCCGCACCTGCTGGTGGCCGGTACCACCGGCTCCGGTAAGTCGGTGGGGGTCAACGCCATGCTC
CTGTCGATCCTGTTCAAGTCTACGCCGAGCGAGGCGCGACTGATCATGATCGACCCGAAGATGCTCGAACTG
TCGATCTACGAAGGGATCCCGCACCTGCTCTGCCCGGTGGTCACCGACATGAAGGAAGCCGCCAACGCCCTG
CGCTGGAGCGTGGCGGAGATGGAGCGGCGCTACCGCCTGATGGCGGCCATGGGCGTGCGCAACCTGGCTGGC
TTCAATCGCAAGGTGAAGGACGCCGAGGAGGCCGGCACGCCGCTGACCGACCCGCTGTTCCGTCGCGAAAGC
CCGGACGACGAGCCGCCGCAACTGAGCACCCTGCCGACCATCGTGGTGGTGGTCGACGAATTCGCCGACATG
ATGATGATCGTCGGCAAGAAGGTCGAGGAGCTTATCGCCCGTATCGCGCAGAAGGCGCGGGCGGCCGGTATC
CACCTGATCCTGGCGACCCAGCGGCCGTCGGTGGACGTGATCACCGGCCTGATCAAGGCCAACATTCCGACC
CGGATCGCCTTCCAGGTCTCCAGCAAGATCGACTCGCGCACCATCCTCGACCAGGGGGGCGCCGAACAACTG
CTCGGCCACGGCGACATGCTCTACCTGCCGCCGGGCACAGGCCTGCCGATTCGCGTACACGGCGCCTTCGTT
TCCGACGACGAGGTGCACCGGGTGGTCGAGGCCTGGAAGCTGCGCGGCGCGCCCGACTACATCGAGGACATC
CTCGCTGGCGTCGACGAAGGCGGCGGCGGTGGCGGTTCCTTCGATGGCGGCGACGGCTCCGGCGAAGGCAGC
GAGGACGACCCGCTCTACGACGAGGCGGTACGTTTCGTCACCGAGAGTCGCCGGGCATCGATCTCCGCCGTG
CAACGCAAGCTGAAGATCGGCTACAACCGCGCCGCGCGGATGATCGAGGCGATGGAGATGGCCGGCGTGGTC
ACCCCGATGAATACCAACGGCTCCCGCGAAGTCATCGCGCCGGCGCCGGTTCGTGATTGA
Translation:
MRRKNSDLKDSTTASHAAAWRQQLHSRLKEGVLIALGALCLYLWMALLTYDPADPSWSHSSQVDQVQNAAGR
LGAVSADILFMTLGYFAYLFPLLLGIKTWQVFRRRNLPWEWNTWLFSWRLVGLIFLILAGSALAYIHFHASG
HMPASASAGGAIGQSLGRVAVDALNVQGSTLVFFALFLFGLTVFADLSWFKVMDVTGKITLDFFELIQNAFN
RWMGARAERKQLVAQLREVDERVAEVVAPSVPDRREQSKAKERLLEREEALAKHMSEREKRPPPKIDPPPPP
KAPEPSKRVLKEKQAPLFVDTAVEGTLPPLSLLDPAEVKQKSYSPESLEAMSRLLEIKLKEFGVEVSVDSVH
PGPVITRFEIQPAAGVKVSRISNLAKDLARSLAVISVRVVEVIPGKTTVGIEIPNEDRQMVRFSEVLSSPEY
DEHKSTVPLALGHDIGGRPIITDLAKMPHLLVAGTTGSGKSVGVNAMLLSILFKSTPSEARLIMIDPKMLEL
SIYEGIPHLLCPVVTDMKEAANALRWSVAEMERRYRLMAAMGVRNLAGFNRKVKDAEEAGTPLTDPLFRRES
PDDEPPQLSTLPTIVVVVDEFADMMMIVGKKVEELIARIAQKARAAGIHLILATQRPSVDVITGLIKANIPT
RIAFQVSSKIDSRTILDQGGAEQLLGHGDMLYLPPGTGLPIRVHGAFVSDDEVHRVVEAWKLRGAPDYIEDI
LAGVDEGGGGGGSFDGGDGSGEGSEDDPLYDEAVRFVTESRRASISAVQRKLKIGYNRAARMIEAMEMAGVV
TPMNTNGSREVIAPAPVRD*
AnnotationID:191GeneID:181
AnnotatorUID: diggins
Modification Date/Time: 2005-03-07 11:11:30
Gene Name:ftsK
Confidence Code:2
GeneProduct:cell division/stress response protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(6) Cell division
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:COG1674,pfam01580
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
>gb|AAC98298.1| (AF095845) cell division/stress response protein [Pseudomonas
           syringae] [Pseudomonas syringae pv. syringae]
          Length = 801

 Score = 1264 bits (3271), Expect = 0.0
 Identities = 654/807 (81%), Positives = 710/807 (87%), Gaps = 9/807 (1%)

>gb|AAN69598.1|AE016593_6 (AE016788) cell division protein FtsK [Pseudomonas putida KT2440]
          Length = 834

 Score = 1210 bits (3130), Expect = 0.0
 Identities = 631/826 (76%), Positives = 701/826 (84%), Gaps = 41/826 (4%)

>gb|AAM41261.1| (AE012301) cell division protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
          Length = 785

 Score =  768 bits (1984), Expect = 0.0
 Identities = 436/808 (53%), Positives = 538/808 (66%), Gaps = 50/808 (6%)

Structural Features:
COG1674, FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins 
[Cell division and chromosome partitioning]
CD-Length = 858 residues,  99.7% aligned
Score =  512 bits (1318), Expect = 8e-146
Identities = 268/879 (30%), Positives = 359/879 (40%), Gaps = 113/879 (12%)

pfam01580, FtsK_SpoIIIE, FtsK/SpoIIIE family. 
CD-Length = 203 residues, 100.0% aligned
Score =  202 bits (514), Expect = 2e-52
Identities = 93/218 (42%), Positives = 128/218 (58%), Gaps = 19/218 (8%)
Genomic Context:
Comment:
ReferenceID:14075
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:17507
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
ReferenceID:33179
Author/Investigator(s):
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:Misc (text/plain)
Data:181_cdd.html
URL:
ReferenceID:34550
Author/Investigator(s): Begg KJ, Dewar SJ, Donachie WD.
Title: A new Escherichia coli cell division gene, ftsK.
PubMed: 7592387
MedLine:
Source:
J Bacteriol. 1995 Nov;177(21):6211-22.
Reference Type:Journal
Data:
URL:http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pubmed&pubmedid=7592387
Homologs By Global Alignment
Gene ID:181

Identity:

0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score
318 PA2615_tr translation of PA2615 811 99.75 99.75 0 4105.0
20876 gb|AAG06003.1|AE004690_3 (AE004690) cell division protein FtsK [Pseudomonas aeruginosa PAO1] 811 99.63 99.75 0 4102.0
20877 gb|AAC98298.1| (AF095845) cell division/stress response protein [Pseudomonas syringae] [Pseudomonas syringae pv. syringae] 814 80.34 87.22 16 3284.0
20878 gb|AAO56827.1| (AE016868) cell division protein FtsK [Pseudomonas syringae pv. tomato str. DC3000] 814 80.09 87.10 16 3273.0
20879 gb|AAN69598.1|AE016593_6 (AE016788) cell division protein FtsK [Pseudomonas putida KT2440] 848 74.76 83.37 51 3163.0
GC ORFID: 43183How Found: BLASTX
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: t_PA2615Glimmer Score:
Start: 2331255Stop: 2328820
Length: 2436
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: t_PA2615 translation of PA2615Homolog Bit Score 1585.0
Other Homologs: psyr_15may02_Scaffold17_revised_gene2812 (ORF: BLASTX 1265.0), t_PA2615 (ORF: GLIMMER)
GC ORF Sequence
GTGCGCAGGAAAAATAGCGATTTGAAGGATTCGACCACCGCGAGCCATGCCGCCGCATGGCGTCAGCAACTG
CATTCCCGCCTGAAGGAAGGGGTCCTGATCGCGCTGGGCGCGCTCTGCCTCTACTTGTGGATGGCTCTGCTC
ACCTATGACCCGGCCGATCCGAGCTGGAGTCACTCGAGCCAGGTTGACCAGGTGCAGAATGCCGCCGGTCGG
CTCGGTGCGGTATCCGCCGATATCCTGTTCATGACGCTCGGCTACTTCGCCTACCTCTTTCCGCTGTTGCTG
GGCATCAAGACTTGGCAGGTATTCCGCCGCCGCAACCTGCCGTGGGAATGGAACACCTGGCTGTTTTCCTGG
CGCCTGGTCGGGCTGATCTTCCTGATCCTGGCCGGCTCGGCACTGGCCTACATCCATTTCCACGCCAGCGGC
CACATGCCGGCCAGCGCCTCGGCCGGCGGCGCCATCGGCCAGAGCCTGGGCCGCGTCGCGGTGGATGCGCTG
AACGTGCAGGGCAGCACGCTGGTGTTCTTCGCCCTGTTCCTCTTCGGCCTGACGGTGTTCGCCGACCTCTCC
TGGTTCAAGGTGATGGATGTCACCGGCAAGATCACCCTGGACTTCTTCGAACTGATCCAGAACGCCTTCAAT
CGCTGGATGGGCGCGCGCGCCGAGCGCAAGCAACTGGTCGCGCAACTGCGCGAGGTCGACGAGCGCGTCGCC
GAGGTGGTGGCGCCGAGCGTGCCGGACCGCCGCGAACAGTCCAAGGCCAAGGAGCGCCTGCTGGAACGCGAA
GAGGCCCTGGCCAAGCACATGAGCGAGCGGGAGAAGCGCCCGCCGCCGAAGATCGATCCGCCACCGCCTCCG
AAGGCCCCGGAGCCGAGCAAGCGCGTGCTGAAAGAGAAGCAGGCGCCGCTGTTCGTCGATACGGCGGTGGAG
GGCACCCTGCCGCCGCTGTCGCTGCTCGACCCGGCGGAAGTGAAGCAGAAGAGCTACTCGCCCGAGTCGCTG
GAGGCGATGTCGCGCCTGCTGGAGATCAAGCTGAAGGAGTTCGGCGTCGAGGTCAGCGTGGATTCGGTGCAT
CCGGGCCCCGTGATCACCCGTTTCGAGATCCAGCCCGCGGCGGGGGTCAAGGTCAGCCGCATTTCCAACCTG
GCCAAGGACCTGGCGCGCTCGTTGGCGGTGATCAGCGTGCGGGTGGTGGAAGTGATTCCCGGCAAGACCACC
GTCGGCATCGAGATTCCCAATGAAGACCGGCAGATGGTGCGCTTCTCCGAAGTGCTGTCGTCGCCGGAGTAC
GACGAGCACAAGTCCACCGTGCCGCTGGCCCTGGGCCACGACATCGGCGGTCGGCCGATCATCACCGACCTG
GCGAAGATGCCGCACCTGCTGGTGGCCGGTACCACCGGCTCCGGTAAGTCGGTGGGGGTCAACGCCATGCTC
CTGTCGATCCTGTTCAAGTCTACGCCGAGCGAGGCGCGACTGATCATGATCGACCCGAAGATGCTCGAACTG
TCGATCTACGAAGGGATCCCGCACCTGCTCTGCCCGGTGGTCACCGACATGAAGGAAGCCGCCAACGCCCTG
CGCTGGAGCGTGGCGGAGATGGAGCGGCGCTACCGCCTGATGGCGGCCATGGGCGTGCGCAACCTGGCTGGC
TTCAATCGCAAGGTGAAGGACGCCGAGGAGGCCGGCACGCCGCTGACCGACCCGCTGTTCCGTCGCGAAAGC
CCGGACGACGAGCCGCCGCAACTGAGCACCCTGCCGACCATCGTGGTGGTGGTCGACGAATTCGCCGACATG
ATGATGATCGTCGGCAAGAAGGTCGAGGAGCTTATCGCCCGTATCGCGCAGAAGGCGCGGGCGGCCGGTATC
CACCTGATCCTGGCGACCCAGCGGCCGTCGGTGGACGTGATCACCGGCCTGATCAAGGCCAACATTCCGACC
CGGATCGCCTTCCAGGTCTCCAGCAAGATCGACTCGCGCACCATCCTCGACCAGGGGGGCGCCGAACAACTG
CTCGGCCACGGCGACATGCTCTACCTGCCGCCGGGCACAGGCCTGCCGATTCGCGTACACGGCGCCTTCGTT
TCCGACGACGAGGTGCACCGGGTGGTCGAGGCCTGGAAGCTGCGCGGCGCGCCCGACTACATCGAGGACATC
CTCGCTGGCGTCGACGAAGGCGGCGGCGGTGGCGGTTCCTTCGATGGCGGCGACGGCTCCGGCGAAGGCAGC
GAGGACGACCCGCTCTACGACGAGGCGGTACGTTTCGTCACCGAGAGTCGCCGGGCATCGATCTCCGCCGTG
CAACGCAAGCTGAAGATCGGCTACAACCGCGCCGCGCGGATGATCGAGGCGATGGAGATGGCCGGCGTGGTC
ACCCCGATGAATACCAACGGCTCCCGCGAAGTCATCGCGCCGGCGCCGGTTCGTGATTGA