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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG07190.1|AE004798_13 (AE004798) probable isoprenoid biosynthetic protein GcpE [Pseudomonas aeruginosa PAO1]
Identities = 371/371 (100%), Positives = 371/371 (100%)
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Sequence:
ATGAGCATTCATAGCGCTTCTCCGATCATTCGCCGCAAGTCTCGGAAAATCTGGGTCGGCAACGTCCCGGTG
GGCGGCGATGCGCCGATCGCCGTGCAGAGCATGACCAACACCGAGACCTGCGACGTCGCTGCCACCGTCGCG
CAGATCCGCCGCCTGGAAGATGCCGGTGCGGACATCGTGCGGGTTTCCGTCCCCGACATGGACGCCGCCGAG
GCGTTCGGCAAGATCAAGCAGCAGGTCAACGTGCCGCTGGTCGCCGACATCCACTTCGACTATCGCATCGCC
CTGCGCGTCGCCGAGCTGGGAGTGGACTGCCTGCGCATCAATCCGGGCAACATCGGTCGCGAGGACCGGGTC
AAGGCCGTGGTCGACGCCGCGCGCGAGCGCAACATCCCGATCCGTATCGGCGTCAATGCCGGTTCGCTGGAA
AAGGACCTGCAGAAGAAATACGGCGAACCGACCCCGGAAGCCCTGCTCGAATCGGCCATGCGCCACGTCGAT
CATCTCGACAAGCTGGACTTCCAGAACTTCAAGGTCAGCGTCAAGGCCTCCGACGTCTTCATGGCCGTCGCC
GCCTATCGCCTGCTGGCCAGGCAGATCGAGCAGCCCCTGCACCTGGGCATCACCGAGGCCGGCGGCCTGCGC
TCCGGCACGGTGAAGTCGGCGGTGGGGCTGGGCATGCTCCTGGCCGAGGGAATCGGCGACACCATCCGGATT
TCCCTGGCTGCCGATCCGGTCGAGGAGATCAAGGTCGGTTTCGACATCCTCAAGTCCCTGCACCTGCGCTCC
CGTGGCATCAACTTCATCGCCTGCCCGAGCTGTTCGCGGCAGAACTTCGACGTGGTGAAGACCATGAACGAG
CTGGAAGGGCGCCTGGAGGACCTGCTGGTGCCGATGGACGTGGCCGTGATCGGTTGCGTCGTCAACGGTCCG
GGCGAAGCCAAGGAGGCCCATGTCGGCCTCACCGGCGGCACTCCGAACCTGGTGTATATCGACGGCAAGCCG
TCGCAGAAACTGACCAACGACAACCTGGTGGACGAGCTGGAACGGCTGATCCGCCAGAAGGCGGCCGAGAAG
GCCGAGGCCGATGCGAGCCTGATCGCCCGCGGCTGA |
Translation:
MSIHSASPIIRRKSRKIWVGNVPVGGDAPIAVQSMTNTETCDVAATVAQIRRLEDAGADIVRVSVPDMDAAE
AFGKIKQQVNVPLVADIHFDYRIALRVAELGVDCLRINPGNIGREDRVKAVVDAARERNIPIRIGVNAGSLE
KDLQKKYGEPTPEALLESAMRHVDHLDKLDFQNFKVSVKASDVFMAVAAYRLLARQIEQPLHLGITEAGGLR
SGTVKSAVGLGMLLAEGIGDTIRISLAADPVEEIKVGFDILKSLHLRSRGINFIACPSCSRQNFDVVKTMNE
LEGRLEDLLVPMDVAVIGCVVNGPGEAKEAHVGLTGGTPNLVYIDGKPSQKLTNDNLVDELERLIRQKAAEK
AEADASLIARG* |
AnnotationID:1813 | GeneID:1804 |
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Modification Date/Time: |
2005-04-24 11:11:56 |
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GeneProduct: | putative isoprenoid biosynthetic protein |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (13) Fatty acid and phospholipid metabolism |
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Alternate Gene Product Name: | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAN66478.1|AE016276_13 (AE016777) 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas putida KT2440]
Length = 369
Score = 667 bits (1721), Expect = 0.0
Identities = 337/369 (91%), Positives = 359/369 (97%)
>gb|AAN81487.1|AE016764_169 (AE016764) 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Escherichia coli CFT073]
Length = 372
Score = 532 bits (1371), Expect = e-150
Identities = 267/362 (73%), Positives = 313/362 (86%), Gaps = 1/362 (0%)
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Structural Features: | pfam04551, GcpE, GcpE protein.
CD-Length = 352 residues, 82.1% aligned
Score = 453 bits (1168), Expect = 2e-128
Identities = 236/351 (67%), Positives = 284/351 (80%), Gaps = 1/351 (0%)
COG0821, GcpE, Enzyme involved in the deoxyxylulose pathway
of isoprenoid biosynthesis
[Lipid metabolism]
CD-Length = 361 residues, 82.3% aligned
Score = 439 bits (1131), Expect = 4e-124
Identities = 228/359 (63%), Positives = 282/359 (78%), Gaps = 2/359 (0%)
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