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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG03527.1|AE004451_8 (AE004451) probable permease of ABC transporter [Pseudomonas aeruginosa PAO1]
Identities = 364/365 (99%), Positives = 365/365 (100%)
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Sequence:
ATGCTGTTGTCCCTGGAACCGCGCGGCCGGCAGTCGCGCTGGATGCTGCTGGCCTCTCCGCTGCTGGCGGGG
TTGCTGACCCTGGTCTGCGGCGCGCTGCTGTTCGCCTGTCTCGGCCACGATCCGTGGCAGACCCTGCATACC
GTGCTGGTACAGCCGCTCAGCGACCTCTATGGGCTCGGCGAGCTGCTGGTCAAGGCCATGCCGATCCTGCTC
TGTGCCCTCGGCCTGGCACTGGCCTACCAGGCGCGCGTGTGGAACATCGGCGCGGAGGGCCAGTTGCTGGTC
GGCGCCCTGGCCGGCAGCGCGGTGGCGATCCAGTTGCTCGACTGGCAGAGCCGCTGGGCGCTGGCCTGGGTG
CTGCTCGCCGGCACCGCTGCCGGGGCGCTCTGGGCCGGGTTCGCCGCCTGGCTGCGAACGCGCTTCAACGCC
AACGAGATCCTGACCACCATCATGCTCAACTACATCGCGCTGAACCTGCTGCTGTACGGCGTGCACGGGCCG
TTGAAGGACCCGGATGGCTTCAACTTCCCGCAGTCGGCGCTGTTCGGCGAGGCCAGCCGCCTGCCGGCGCTG
TTCGAGGACAGCCGGGTGCACCTTGGCGCATTGTTCGGCCTGCTGGCGCTGGCGGCGGTCTGGGTGCTGGCG
CAGCGCAGCTTCCTCGGTTTCCAGGTCCGCGTGCTCGGCCTCGACCGCCGCGCCGCCGGTTTCGTCGGTTTC
CGCGAGAAGCGCCTGGTCTGGTTCGTGCTGCTGTTCTCCGGCGCGCTGGCAGGCCTGGCCGGCGTCTGCGAG
GTCGCCGGGCCGATCGGCCAACTGGTGCCGCAGGTCTCGCCGGGCTACGGCTATGCGGCGATCACCGTGGCC
TTCCTCGGCCGTCTCAATCCCTTCGGCATCCTCTGCGCCAGCCTGCTGATGGCGTTGCTCTACCTCGGCGGC
GAGGCCGCGCAGATGAGCCTCAACCTGCCGTTGGCGCTGACCGGGCTGTTCCAGGGGATGATGCTGTTCTTC
CTCCTCGCCTGCGACGTGCTGATCCTCTACCGCCCACGTTTGCACGGACGCTGGCGCAAGCGCCCGGCGCTG
CGCGACGCCCTGGCCTGA |
Translation:
MLLSLEPRGRQSRWMLLASPLLAGLLTLVCGALLFACLGHDPWQTLHTVLVQPLSDLYGLGELLVKAMPILL
CALGLALAYQARVWNIGAEGQLLVGALAGSAVAIQLLDWQSRWALAWVLLAGTAAGALWAGFAAWLRTRFNA
NEILTTIMLNYIALNLLLYGVHGPLKDPDGFNFPQSALFGEASRLPALFEDSRVHLGALFGLLALAAVWVLA
QRSFLGFQVRVLGLDRRAAGFVGFREKRLVWFVLLFSGALAGLAGVCEVAGPIGQLVPQVSPGYGYAAITVA
FLGRLNPFGILCASLLMALLYLGGEAAQMSLNLPLALTGLFQGMMLFFLLACDVLILYRPRLHGRWRKRPAL
RDALA* |
AnnotationID:1802 | GeneID:1793 |
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Modification Date/Time: |
2005-03-23 05:05:09 |
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GeneProduct: | putative permease of ABC transporter |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (27) Transport of small molecules |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | membrane proteins |
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Homology: | >gb|AAO54310.1| (AE016858) ABC transporter, permease protein, putative [Pseudomonas
syringae pv. tomato str. DC3000]
Length = 366
Score = 565 bits (1456), Expect = e-160
Identities = 281/357 (78%), Positives = 313/357 (87%)
>emb|CAD15881.1| (AL646068) PROBABLE TRANSMEMBRANE ABC TRANSPORTER PROTEIN
[Ralstonia solanacearum]
Length = 369
Score = 353 bits (907), Expect = 7e-97
Identities = 190/357 (53%), Positives = 244/357 (68%), Gaps = 8/357 (2%)
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Structural Features: | COG4603, COG4603, ABC-type uncharacterized transport system,
permease component
CD-Length = 356 residues, 99.4% aligned
Score = 311 bits (798), Expect = 9e-86
Identities = 174/357 (48%), Positives = 228/357 (63%), Gaps = 4/357 (1%) |
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