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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG08106.1|AE004885_11 (AE004885) tRNA (uracil-5-)-methyltransferase [Pseudomonas aeruginosa PAO1]
Identities = 359/363 (98%), Positives = 362/363 (99%)
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Sequence:
ATGAGCCGTCCACAGTTCGACCCCAGCGCCTACGCCGCGCAACTGGAAGACAAGAAGTCCCGCCTCGCCGGA
TTGCTGGCCCCGTTCGCGGCACCCGCGCCGGAGATCTTCGAGTCGCCGCGCGAGCATTACCGGCTGCGCGCC
GAATTCCGCTTGTGGCGGGAAACCGGCAACGAGAAGCGTCACTACGCGATGTTCGAGCAGGGCGACAAGCAC
ACGCCGATCCTGATCGAGGATTTCCCCATCGCCAGCCGCCGCATCAACGAACTGATGCCGCGCCTGAAGGCG
GCCTGGGCCGACCCGGCGCTGGGCTTCAAGCTGTTCCAGGTGGAGTTTCTCACCACCCTGGCCGGCGACGCG
CTGATCACCCTCTGCTACCACCGGCCGATCGACGACGCCTGGCGACAGGCAGCGGAAAAGCTCGCGGCGGAA
CTGGGCGTGAACCTGGTCGGACGTTCGCGCGGCAAGCGTATCGTCGTCGGACGCGACTATGTGGAGGAGGAA
CTGTCGGTCGCCGGCCGGCGCTTCCGCTACCGCCAGCCCGAGGGGGCTTTCACCCAGCCCAACGGCGAGGTC
AACCAGAAGATGCTCGGCTGGGCCTACGAGGCGCTCGGCCAGCGCGACGACGACCTGCTCGAACTGTACTGC
GGCAACGGCAACTTCACCCTGCCCCTGGCCACCCGGGTACGCAAGGTGCTGGCCACCGAGATCAGCAAGTCC
TCGGTCAATGCGGCGCTGGCCAACCTGGCCGACAACGCGGTGGACAACGTCAGCCTGGTGCGCCTGTCGGCC
GAAGAGCTGACCCAGGCGCTGAACGAGGTTCGCCCGTTCCGCCGCCTGGCCGACATCGATCTGAAGAGCTAC
GCCTTCGGCAATGTCTTCGTCGATCCGCCACGAGCCGGCATGGATCCGGACACCTGCGAGCTGACCCGGCGC
TTCGAGCGCATCCTGTACATTTCGTGCAACCCGGAAACCCTGGCGCAGAACATCGCCCAACTGCACGACACG
CACCGGATCAGCCGCTGCGCGCTGTTCGACCAGTTCCCCTACACCCACCACATGGAAAGCGGCGTCCTGCTC
GAACGCCGCTGA |
Translation:
MSRPQFDPSAYAAQLEDKKSRLAGLLAPFAAPAPEIFESPREHYRLRAEFRLWRETGNEKRHYAMFEQGDKH
TPILIEDFPIASRRINELMPRLKAAWADPALGFKLFQVEFLTTLAGDALITLCYHRPIDDAWRQAAEKLAAE
LGVNLVGRSRGKRIVVGRDYVEEELSVAGRRFRYRQPEGAFTQPNGEVNQKMLGWAYEALGQRDDDLLELYC
GNGNFTLPLATRVRKVLATEISKSSVNAALANLADNAVDNVSLVRLSAEELTQALNEVRPFRRLADIDLKSY
AFGNVFVDPPRAGMDPDTCELTRRFERILYISCNPETLAQNIAQLHDTHRISRCALFDQFPYTHHMESGVLL
ERR* |
AnnotationID:1791 | GeneID:1782 |
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Modification Date/Time: |
2005-04-26 20:08:11 |
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GeneProduct: | tRNA (uracil-5-)-methyltransferase |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (24) Transcription, RNA processing and degradation |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | translation, ribosomal structure and biogenesis |
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Homology: | >gb|AAN70227.1|AE016662_3 (AE016791) tRNA (uracil-5-)-methyltransferase [Pseudomonas putida
KT2440]
Length = 361
Score = 577 bits (1487), Expect = e-164
Identities = 285/359 (79%), Positives = 314/359 (87%), Gaps = 3/359 (0%)
>dbj|BAA88495.1| (AB023289) (uracil-5-)methyltransferase [Pseudomonas fluorescens]
Length = 363
Score = 573 bits (1478), Expect = e-163
Identities = 283/364 (77%), Positives = 319/364 (87%), Gaps = 3/364 (0%)
>gb|AAM83915.1|AE013632_3 (AE013632) tRNA (uracil-5-)-methyltransferase [Yersinia pestis KIM]
Length = 367
Score = 363 bits (933), Expect = e-100
Identities = 189/360 (52%), Positives = 246/360 (68%), Gaps = 9/360 (2%) |
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Structural Features: | pfam05958, tRNA_U5-meth_tr,
tRNA (Uracil-5-)-methyltransferase.
CD-Length = 352 residues, 100.0% aligned
Score = 591 bits (1524), Expect = 5e-170
Identities = 238/355 (67%), Positives = 275/355 (77%), Gaps = 4/355 (1%)
COG2265, TrmA, SAM-dependent methyltransferases related to
tRNA (uracil-5-)-methyltransferase
[Translation, ribosomal structure and biogenesis]
CD-Length = 432 residues, 82.9% aligned
Score = 279 bits (715), Expect = 4e-76
Identities = 116/373 (31%), Positives = 162/373 (43%), Gaps = 32/373 (8%) |
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