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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG04723.1|AE004562_10 (AE004562) probable oxidoreductase [Pseudomonas aeruginosa PAO1]
Identities = 366/370 (98%), Positives = 368/370 (99%)
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Sequence:
ATGCTGTTCAGCCCCTATGCCTTTGGCCACCTGACCCTCCCCAATCGCATCGTCATGCCGCCGATGACCCGT
TCCCGAGCCGCCAGTGGTGAAGTCGCCACCGCGCTGATGGCCGAGTACTACAGCCAGCGCGCCGGCGCCGGC
CTGATCGTTTCCGAAGGCACCCAGATCAGCCGGCAGGGCCAGGGCTACGCCTGGACACCGGGCATCCACAGC
GCCGAGCAGGTCGCCGGCTGGCGCCAGGTCACCGACGCGGTGCACGCCGCCGGCGGGCGCATCTTCGCCCAG
CTCTGGCACGTCGGCAGGGTCTCGCACACCTCGCTGCAACCGGGCAACGCCGCCCCGGTGTCCTCCTCGGCG
CTGGTGGCCGAAGGCGTGAAGGTCTTCGTCGATCCCCAGGGCCGCGGAGCGCAGGCCGGCGGCGGCGAGATG
GTCCAGCACTCGGCGCCGCGTGCGCTGGCCGTGGAGGAAATCCGGGAGATCGTCGCCGACTATGCCCAGGCC
GCACGCAACGCCCTCGACGCCGGCTTCGACGGGGTCGAGCTGCACGGCGCCAACGGCTACCTGATCAACCAG
TTCATCGACTCCCAGGCCAATGCGCGCAACGACCAATACGGCGGCTCGCTGGAGAACCGCCTGCGCTTCCTC
CGCGAAGTCGCCGAGGCGGTCACCGCGGTGGTCGGCAGGGAGCGCATCGGCGTGCGCCTGGCGCCGCTGACC
ACCCTGCAGGGCGCGGTCGACGACACCCCGCAAGCCACCTACCTGGCCGCGGCGCGGCTACTGGACGAGATC
GGCGTGGCCTACATCCACATCGCCGAGGCCGACTGGGAAGACGCCCCGGCCATGCCGGCGGCGTTCAAGGAA
GCGTTGCGCATCGTCTACCGTGGCAGCCTGATCTACTCCGGCATGTACACCAAGGCGCGCGCCGAGGAAGCC
CTGGCCAAGGGCTGGGCCGACCTGATCGGCTTCGGCCGGCCGTTCATCGCCAACCCTGACCTGCCCTACCGC
CTGGAGCACGACCTGGCGCTGGCCGACGGCGACCGCTCGACCTACTTCGGTGGCGGCGCCGCCGGCTACACC
GACTACCCGAGCCTGCCGCAGGCGGCCGGTTGA |
Translation:
MLFSPYAFGHLTLPNRIVMPPMTRSRAASGEVATALMAEYYSQRAGAGLIVSEGTQISRQGQGYAWTPGIHS
AEQVAGWRQVTDAVHAAGGRIFAQLWHVGRVSHTSLQPGNAAPVSSSALVAEGVKVFVDPQGRGAQAGGGEM
VQHSAPRALAVEEIREIVADYAQAARNALDAGFDGVELHGANGYLINQFIDSQANARNDQYGGSLENRLRFL
REVAEAVTAVVGRERIGVRLAPLTTLQGAVDDTPQATYLAAARLLDEIGVAYIHIAEADWEDAPAMPAAFKE
ALRIVYRGSLIYSGMYTKARAEEALAKGWADLIGFGRPFIANPDLPYRLEHDLALADGDRSTYFGGGAAGYT
DYPSLPQAAG* |
AnnotationID:1762 | GeneID:1753 |
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Modification Date/Time: |
2005-05-26 09:09:12 |
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GeneProduct: | putative oxidoreductase, FMN-binding |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (20) Putative enzymes |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >dbj|BAC62116.1| (AP005086) N-ethylmaleimide reductase [Vibrio parahaemolyticus]
Length = 366
Score = 441 bits (1133), Expect = e-123
Identities = 222/364 (60%), Positives = 267/364 (73%), Gaps = 7/364 (1%)
>gb|AAN55488.1|AE015686_9 (AE015686) oxidoreductase, FMN-binding [Shewanella oneidensis MR-1]
Length = 365
Score = 434 bits (1115), Expect = e-121
Identities = 225/364 (61%), Positives = 267/364 (73%), Gaps = 7/364 (1%)
>gb|AAN68098.1|AE016441_10 (AE016783) NADH-dependent flavin oxidoreductase, Oye family
[Pseudomonas putida KT2440]
Length = 374
Score = 432 bits (1111), Expect = e-120
Identities = 215/371 (57%), Positives = 271/371 (73%), Gaps = 13/371 (3%) |
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Structural Features: | COG1902, NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family
[Energy production and conversion]
CD-Length = 363 residues, 98.3% aligned
Score = 331 bits (849), Expect = 1e-91
Identities = 157/379 (41%), Positives = 211/379 (55%), Gaps = 33/379 (8%)
pfam00724, Oxidored_FMN, NADH:flavin oxidoreductase / NADH oxidase family.
CD-Length = 335 residues, 99.4% aligned
Score = 275 bits (704), Expect = 7e-75
Identities = 135/354 (38%), Positives = 185/354 (52%), Gaps = 33/354 (9%)
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GC ORFID: 44755 | How Found: BLASTX |
GC_TrimmedSeqID: 69 | Blast Result ID |
Subject Sequence Name: t_PA1334 | Glimmer Score: |
Start: 766204 | Stop: 765092 |
Length: 1113 | |
Start Codon: ATG | Truncated Start: |
Stop Codon: TGA | Truncated Stop: |
Homolog: t_PA1334 translation of PA1334 | Homolog Bit Score 731.0 |
Other Homologs: t_PA2932 (ORF: BLASTX 400.0), psyr_15may02_Scaffold10_revised_gene1546 (ORF: BLASTX 319.0), psyr_15may02_Scaffold7_revised_gene7163 (ORF: BLASTX 304.0), t_PA4356 (ORF: BLASTX 303.0), psyr_15may02_Scaffold12_revised_gene1974 (ORF: BLASTX 292.0), t_PA0840 (ORF: BLASTX 179.0), psyr_15may02_Scaffold3_revised_gene4342 (ORF: BLASTX 166.0), t_PA1334 (ORF: GLIMMER) |
GC ORF Sequence |
ATGCTGTTCAGCCCCTATGCCTTTGGCCACCTGACCCTCCCCAATCGCATCGTCATGCCGCCGATGACCCGT TCCCGAGCCGCCAGTGGTGAAGTCGCCACCGCGCTGATGGCCGAGTACTACAGCCAGCGCGCCGGCGCCGGC CTGATCGTTTCCGAAGGCACCCAGATCAGCCGGCAGGGCCAGGGCTACGCCTGGACACCGGGCATCCACAGC GCCGAGCAGGTCGCCGGCTGGCGCCAGGTCACCGACGCGGTGCACGCCGCCGGCGGGCGCATCTTCGCCCAG CTCTGGCACGTCGGCAGGGTCTCGCACACCTCGCTGCAACCGGGCAACGCCGCCCCGGTGTCCTCCTCGGCG CTGGTGGCCGAAGGCGTGAAGGTCTTCGTCGATCCCCAGGGCCGCGGAGCGCAGGCCGGCGGCGGCGAGATG GTCCAGCACTCGGCGCCGCGTGCGCTGGCCGTGGAGGAAATCCGGGAGATCGTCGCCGACTATGCCCAGGCC GCACGCAACGCCCTCGACGCCGGCTTCGACGGGGTCGAGCTGCACGGCGCCAACGGCTACCTGATCAACCAG TTCATCGACTCCCAGGCCAATGCGCGCAACGACCAATACGGCGGCTCGCTGGAGAACCGCCTGCGCTTCCTC CGCGAAGTCGCCGAGGCGGTCACCGCGGTGGTCGGCAGGGAGCGCATCGGCGTGCGCCTGGCGCCGCTGACC ACCCTGCAGGGCGCGGTCGACGACACCCCGCAAGCCACCTACCTGGCCGCGGCGCGGCTACTGGACGAGATC GGCGTGGCCTACATCCACATCGCCGAGGCCGACTGGGAAGACGCCCCGGCCATGCCGGCGGCGTTCAAGGAA GCGTTGCGCATCGTCTACCGTGGCAGCCTGATCTACTCCGGCATGTACACCAAGGCGCGCGCCGAGGAAGCC CTGGCCAAGGGCTGGGCCGACCTGATCGGCTTCGGCCGGCCGTTCATCGCCAACCCTGACCTGCCCTACCGC CTGGAGCACGACCTGGCGCTGGCCGACGGCGACCGCTCGACCTACTTCGGTGGCGGCGCCGCCGGCTACACC GACTACCCGAGCCTGCCGCAGGCGGCCGGTTGA |
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