Modification Date/Time: 2006-04-06 13:01:23
Missense Discrepancy: FALSE
Comments:Homology: gb|AAG03394.1| AE004440_4 (AE004440) DNA gyrase subunit B [Pseudomonas aeruginosa PAO1]
Identities = 806/806 (100%), Positives = 806/806 (100%)
Sequence:
ATGAGCGAGAACAACACGTACGACTCTTCCAGCATCAAGGTGCTGAAGGGGCTGGATGCCGTACGCAAGCGC
CCCGGCATGTACATCGGCGACACCGACGATGGCACCGGTCTGCACCACATGGTGTTCGAGGTGGTGGATAAC
TCCATCGACGAAGCGCTGGCCGGTTACTGCAGCGAAATCAGCATCACCATCCATACGGATGAGTCGATCACT
GTCCGCGACAATGGACGCGGTATTCCGGTGGATATCCACAAGGAAGAAGGGGTTTCTGCGGCGGAAGTGATC
ATGACCGTCCTCCACGCCGGCGGCAAGTTCGACGACAACACCTACAAAGTGTCCGGCGGCTTGCACGGTGTG
GGCGTCTCGGTGGTGAACGCGCTGTCCCATGAGCTGCGCCTGACCATCCGTCGCCACAACAAGGTCTGGGAA
CAGGTCTACCACCACGGCGTTCCGCAGTTCCCACTGCGCGAAGTGGGCGAGACCGATGGCTCCGGTACCGAA
GTTCACTTCAAGCCGTCCCCGGAGACCTTCAGCAACATCCACTTCAGTTGGGACATCCTGGCCAAGCGCATC
CGCGAACTGTCCTTCCTCAACTCCGGCGTCGGCATCCTGCTGCGCGACGAGCGTACCGGCAAGGAGGAGCTG
TTCAAGTACGAAGGCGGTCTGAAGGCCTTCGTCGAGTACTTGAACACCAACAAGACCGCGGTGAACGAGGTA
TTCCACTTCAACGTCCAGCGTGAAGAGGACGGCGTGGGTGTGGAAGTCGCCTTGCAGTGGAACGACAGCTTC
AACGAGAACCTGCTCTGCTTCACCAACAACATCCCGCAGCGTGATGGCGGCACCCACCTGGCCGGTTTCCGT
TCGGCGCTGACGCGTAACCTGAACAACTACATCGAGGCCGAAGGCCTGGCGAAGAAATTCAAGATCGCCACC
ACCGGCGACGATGCCCGCGAAGGCCTCACCGCGATCATCTCGGTGAAGGTACCGGACCCGAAGTTCAGCTCG
CAGACCAAGGACAAGCTGGTCTCCTCCGAGGTGAAGACCGCGGTGGAACAGGAGATGGGCAAGTACTTCGCC
GACTTCCTGCTGGAGAATCCCAACGAAGCCAAGGCCGTGGTCGGCAAGATGATCGACGCCGCCCGTGCCCGT
GAAGCCGCGCGCAAGGCGCGCGAGATGACCCGCCGCAAGGGCGCGCTGGACATCGCCGGCCTGCCCGGCAAA
CTGGCCGATTGCCAGGAAAAGGACCCGGCGCTCTCCGAACTGTACATCGTGGAGGGTGACTCCGCGGGCGGT
TCCGCCAAGCAGGGCCGCAATCGCCGGACCCAGGCGATCCTGCCGCTCAAGGGCAAGATCCTCAACGTCGAG
AAGGCACGCTTCGACAAGATGCTCTCCTCCCAGGAGGTCGGTACGCTGATCACCGCCCTGGGCTGTGGCATC
GGCCGCGAGGAGTACAACATCGACAAGCTGCGCTACCACAACATCATCATCATGACCGATGCTGACGTCGAC
GGTTCGCACATCCGCACCCTGCTGTTGACCTTCTTCTTCCGCCAGATGCCCGAGCTGATCGAGCGTGGCTAC
ATCTACATCGCCCAGCCCCCGTTGTACAAGGTCAAGCGTGGCAAGCAGGAGCAGTACATCAAGGACGACCAG
GCCATGGAAGAGTACATGACCCAGTCGGCCCTGGAAGACGCCAGCCTGCACGTCAACGAGCACGCTCCGGGC
CTGTCCGGGGCAGCGCTGGAGAAACTGGTCAACGAGTATCGCGGGGTGATCGCCACCCTCAAGCGCCTGTCG
CGCCTGTACCCCCAGGAGCTGACCGAGCACTTCATCTACCTGCCTACCGTGTCGGTGGACGACCTGGCTAAC
GAGTCGGCCATGCAGGGCTGGTTGGAGAAGTTCCAGGCGCGCCTGACCGCCGCCGAGAAGTCTGGCCTGACC
TACAAGGCCAGCCTGCGCGAAGACCGCGAGCGCCACCTGTGGCTGCCCGAGGTGGAACTGGTGGCCCACGGC
CTGTCCAGCTACGTCACCTTCAACCGTGACTTCTTCGCCAGCAATGACTACCGCTCGGTGTCGCTGCTCGGC
GACCAGCTGAACAGCCTGCTGGAAGACGGCGCCTACGTGCAGAAGGGTGAGCGCAAGCGCCCGATCAGCGCC
TTCAAGGACGGCCTGGACTGGCTGATGGCCGAAGGTACCAAGCGCCACAGCATCCAGCGATACAAGGGGTTG
GGCGAGATGAACCCTGAGCAGCTGTGGGAAACCACCATGGATCCGAACGTCCGGCGCATGCTCAAGGTGACC
ATCGAGGACGCCATCGCCGCCGACCAGATCTTCAACACCCTGATGGGCGATGCCGTGGAGCCGCGCCGCGAC
TTCATCGAAAGCAACGCGCTGGCGGTGTCGAACCTGGACGTGTGA
Translation:
MSENNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEISITIHTDESIT
VRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGVGVSVVNALSHELRLTIRRHNKVWE
QVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSNIHFSWDILAKRIRELSFLNSGVGILLRDERTGKEEL
FKYEGGLKAFVEYLNTNKTAVNEVFHFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFR
SALTRNLNNYIEAEGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFA
DFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSELYIVEGDSAGG
SAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGIGREEYNIDKLRYHNIIIMTDADVD
GSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVKRGKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPG
LSGAALEKLVNEYRGVIATLKRLSRLYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLT
YKASLREDRERHLWLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPISA
FKDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIFNTLMGDAVEPRRD
FIESNALAVSNLDV*
AnnotationID:184 GeneID:174
Modification Date/Time:
2005-03-22 10:10:17
GeneProduct: DNA gyrase subunit B
Cell Localization Confidence Code: 5
Functional Category: (11) DNA replication, recombination, modification and repair
Alternate Gene Product Name: DNA topoisomerase chain B
Functional Category Confidence Code: 5
Secondary Functional Category(ies):
Homology: >gb|AAO53561.1| (AE016856) DNA gyrase, subunit B [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 805
Score = 1416 bits (3665), Expect = 0.0
Identities = 696/805 (86%), Positives = 757/805 (94%), Gaps = 1/805 (0%)
>gb|AAN65647.1| AE016191_4 (AE016774) DNA gyrase, subunit B [Pseudomonas putida KT2440]
Length = 806
Score = 1388 bits (3593), Expect = 0.0
Identities = 686/806 (85%), Positives = 752/806 (93%), Gaps = 2/806 (0%)
>gb|AAN83054.1| AE016769_169 (AE016769) DNA gyrase subunit B [Escherichia coli CFT073]
Length = 805
Score = 1127 bits (2915), Expect = 0.0
Identities = 552/805 (68%), Positives = 667/805 (82%), Gaps = 4/805 (0%)
Structural Features: COG0187 , GyrB, Type IIA topoisomerase
(DNA gyrase/topo II, topoisomerase IV), B subunit
[DNA replication, recombination, and repair]
CD-Length = 635 residues, 87.9% aligned
Score = 900 bits (2328), Expect = 0.0
Identities = 362/562 (64%), Positives = 446/562 (79%), Gaps = 7/562 (1%)
smart00433, TOP2c, TopoisomeraseII;
Eukaryotic DNA topoisomerase II, GyrB, ParE
CD-Length = 594 residues, 87.7% aligned
Score = 678 bits (1751), Expect = 0.0
Identities = 281/526 (53%), Positives = 366/526 (69%), Gaps = 7/526 (1%)