Modification Date/Time: 2006-04-06 13:01:23
Missense Discrepancy: FALSE
Comments:Homology: gb|AAG05532.1| AE004641_11 (AE004641) glycogen phosphorylase [Pseudomonas aeruginosa PAO1]
Identities = 811/812 (99%), Positives = 811/812 (99%)
Sequence:
ATGCCCGACAGCCAAGACCAGACCCCGAGCACGGTCCAGACCCTGAAAGCCAGCATCCTCGCCAAGCTGCGC
TACAGCGTCGGCCGCGACCCATCCACCGCCTGCCCGCACGACTGGTTCGAAGCGGTGGCCCTGGCGGTGCGC
GACCACATCATCGACCACTGGGAGGAGGCCACCCCGCAAGGCGAAGCGCCCGCGCGCAAGCGGGTCTACTAC
CTGTCCCTGGAGTTCCTCATCGGTCGCCTGTTGCTGGACAACCTCGGCAACCTCGGGCTGCTCGAGGAAACC
CGCCAGGCCCTTGCCGAGCTGGGCGTCGACCTGCAGCGGATCGTTGCCCTGGAGCCGGACGCGGCGCTCGGC
AACGGCGGCCTCGGACGCCTGGCGGCATGCTTCATGGAAAGCATGGCCAGCCTCGACATTCCCGCGCATGGC
TATGGCATCCGCTACGAGCATGGCCTGTTCCGCCAGGTGCTGACCGACGGCTGGCAGCAGGAGCAGACCGAG
ACCTGGCTGGATTTCGGCAATCCCTGGGAGTTCGAACGACCCGAGGTCAGCTACTACATCGACTTCGGCGGC
AGCGTGCAGGTCGACAGCGAGCACAGTGGCCGTGCCATCTGGCGGCCGGACGAGCGGATCCGGGCGATCGCC
TACGACACGCCGATCGTCGGCTGGCGGCGTGCCAGCGTCAACACCCTGCGCCTGTGGCGCGCCCGCGCCGAG
GAAGACCTGCAACTGGACCGTTTCAACGCCGGCGACCATATCGGCGCGGTGGTCGACGTGGTCAAGGCGGAG
AGCATCTCGCGGGTGCTGTATCCGGCCGACAGCACCGAGGCCGGTCAGGAACTGCGCCTGCGCCAGGAGTAC
TTCTTCGTCTCAGCCTCGCTGCAGGACCTGCTCGACCGCCACCTGCGCCATCATCACGACCTGCGTAGCCTG
CCGGAACAGGTGGCGATCCAGCTCAACGACACCCACCCGGCGATCGCCGTCGCCGAGTTGATGCGGCAACTG
GTGGACGTGCACCAACTGGCCTGGCCGGACGCCTGGGCGCTGAGCGTGGCGACCCTGTCCTACACCAACCAC
ACGCTGCTCCCGGAAGCCCTGGAATCCTGGCCGGTGGCGCTGATGGAGCGCCTGCTGCCGCGCCACATGCAG
ATCATCTACCTGATCAACGCCTTCCATATAGACGCGCTGCGCGCCCAGGACATCCACGACTTCGACCTGTTG
CGTTCGGTCAGCCTGATCGAGGAGGGCCACGGCCGGCGGGTGCGCATGGGCAACCTGGCGTTCCTCGGTTCG
CACCAGATCAACGGGGTATCGGCCTTGCACACCGAGCTGATGCGCGAAACCGTGTTCCATGACCTGCATCGC
CTCTACCCGCAGCGCATCAGCAACAAGACCAACGGCGTGTCGTTCCGCCGCTGGCTGTTCCAGGCCAACCCG
GGGTTGACCGAGCTGCTGGTGGAGACCCTCGGCGCCGACCTGCTGGACACCCCGGAACGGCGCCTGCCGGAC
CTCGAGGAGCACGTCGAGGACGCCAGGCTGCGGGCGCGCTTCGCCGAGCAGCGCCGGCAGAACAAGACCGCC
CTGGCGCGCCTGGTGCTGGACAGCCTCGGCGTGGCGATCGAACCGGAAGCGCTGTTCGATGTGCATATCAAG
CGTATCCACGAATACAAGCGGCAGTTGCTCAACCTGCTGCACACCGTGGCGCTGTACCAGGAGATCCGCAAC
GACCCGACCGCCGACCGCGTGCCGCGGGTGAAGATCTTCGCCGGCAAGGCTGCCGCCAGCTACCACCAGGCC
AAGCTGATCATCAAGCTGGCCAACGACATCGCCCGCACCATCAACGACGACCCCACCGTGCGCGGCCTGCTC
AAGCTGGTGTTCCTGCCCAACTACAACGTCAGCCTGGCCGAGGCGATCATTCCCGCGGCGGACCTCTCCGAG
CAGATTTCCACCGCCGGGCTCGAGGCCTCCGGCACCAGCAACATGAAGTTCGCCCTCAACGGCGCGCTGACC
ATCGGCACCCTGGACGGCGCCAACGTCGAGATGAGCCAGCGGATCGGCCTGGAACACATGTTCATCTTCGGC
CTCAGCGCCCAGCAGGTGGAGCAGCGCCGGCAAGCCGGGGAGCTGGAGATGGGCGGGGTGATCGCGGCCTCG
CCGCGGCTGGAGGAAGCCCTGGAGGCGATCCGCAGTGGGCTGTTCTCGGCCGACGACCGCAGCCGCTACGAA
GGGCTGGTGGACGGCCTGGTGCACGACGACCGCTTCATGCTCTGCGCCGACTTCGAGGCCTACTGGCATGCG
CAGTGCCGGGTCGAGGAAGTCTGGCGCGAGCCCGATCGCTGGTGGCGCTCGGCGTTGCTCAACGTGGCGCGG
ATCGGCTGGTTCAGCGCCGACCGGACGATCAGCGAATACGCCCGGGATATCTGGAAGCTATGA
Translation:
MPDSQDQTPSTVQTLKASILAKLRYSVGRDPSTACPHDWFEAVALAVRDHIIDHWEEATPQGEAPARKRVYY
LSLEFLIGRLLLDNLGNLGLLEETRQALAELGVDLQRIVALEPDAALGNGGLGRLAACFMESMASLDIPAHG
YGIRYEHGLFRQVLTDGWQQEQTETWLDFGNPWEFERPEVSYYIDFGGSVQVDSEHSGRAIWRPDERIRAIA
YDTPIVGWRRASVNTLRLWRARAEEDLQLDRFNAGDHIGAVVDVVKAESISRVLYPADSTEAGQELRLRQEY
FFVSASLQDLLDRHLRHHHDLRSLPEQVAIQLNDTHPAIAVAELMRQLVDVHQLAWPDAWALSVATLSYTNH
TLLPEALESWPVALMERLLPRHMQIIYLINAFHIDALRAQDIHDFDLLRSVSLIEEGHGRRVRMGNLAFLGS
HQINGVSALHTELMRETVFHDLHRLYPQRISNKTNGVSFRRWLFQANPGLTELLVETLGADLLDTPERRLPD
LEEHVEDARLRARFAEQRRQNKTALARLVLDSLGVAIEPEALFDVHIKRIHEYKRQLLNLLHTVALYQEIRN
DPTADRVPRVKIFAGKAAASYHQAKLIIKLANDIARTINDDPTVRGLLKLVFLPNYNVSLAEAIIPAADLSE
QISTAGLEASGTSNMKFALNGALTIGTLDGANVEMSQRIGLEHMFIFGLSAQQVEQRRQAGELEMGGVIAAS
PRLEEALEAIRSGLFSADDRSRYEGLVDGLVHDDRFMLCADFEAYWHAQCRVEEVWREPDRWWRSALLNVAR
IGWFSADRTISEYARDIWKL*
AnnotationID:180 GeneID:170
Modification Date/Time:
2005-04-28 18:06:02
GeneProduct: glycogen phosphorylase
Cell Localization Confidence Code: 5
Functional Category: (7) Cell wall / LPS / capsule
Alternate Gene Product Name:
Functional Category Confidence Code: 5
Secondary Functional Category(ies): carbohydrate transport and metabolism
Homology: >gb|AAN70606.1| AE016703_6 (AE016793) glycogen phosphorylase [Pseudomonas putida KT2440]
Length = 816
Score = 1169 bits (3025), Expect = 0.0
Identities = 572/802 (71%), Positives = 669/802 (83%), Gaps = 2/802 (0%)
>gb|AAL22394.1| (AE008863) glycogen phosphorylase [Salmonella typhimurium LT2]
Length = 815
Score = 780 bits (2014), Expect = 0.0
Identities = 389/803 (48%), Positives = 555/803 (69%), Gaps = 6/803 (0%)
>gb|AAN82653.1| AE016768_71 (AE016768) Glycogen phosphorylase [Escherichia coli CFT073]
Length = 815
Score = 770 bits (1987), Expect = 0.0
Identities = 385/803 (47%), Positives = 548/803 (68%), Gaps = 6/803 (0%)
Structural Features: pfam00343 , Phosphorylase, Carbohydrate phosphorylase.
CD-Length = 715 residues, 99.7% aligned
Score = 899 bits (2325), Expect = 0.0
Identities = 371/716 (51%), Positives = 507/716 (70%), Gaps = 5/716 (0%)
COG0058 , GlgP, Glucan phosphorylase [Carbohydrate transport and metabolism]
CD-Length = 750 residues, 99.2% aligned
Score = 849 bits (2196), Expect = 0.0
Identities = 365/807 (45%), Positives = 481/807 (59%), Gaps = 68/807 (8%)