ViewGene
Locus Name:
GeneID:
Location:

GeneID:1695
TrivialName: PA14_54660
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_54660
PAO1 Ortholog Locus:PA0744
Sequence Length:1104
Protein Length:367
Start: 4845568
Stop: 4846671
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG04133.1|AE004509_8 (AE004509) probable enoyl-CoA hydratase/isomerase [Pseudomonas aeruginosa PAO1]
Identities = 366/367 (99%), Positives = 366/367 (99%)
Sequence:
ATGAACGTGCTTTTCGAAGAACGCCCGAGCCTGCATGGCTTCCGCATCGGCATTGCCACCCTGGATGCGGAA
AAGAGCCTGAACGCCCTGTCCCTGCCGATGATCGAGGCCCTGGCGGCGAAACTCGACGCCTGGGCCGAGGAC
GCCGGCATCGCCTGCGTGCTGTTGCGCGGCAACGGCGCCAAGGCCTTTTGCGCCGGCGGCGACGTGCGCAAG
CTGGTGGACGCCTGCCGTGAGCAACCCGGCGAGGTACCGGCCCTGGCGCGACGCTTCTTCGCCGATGAATAC
CGCCTCGACTACCGCATCCACACCTACCCGAAACCCTTCATCTGCTGGGCCCACGGCTATGTAATGGGCGGC
GGCATGGGGCTGATGCAGGGTGCCGGGATTCGCATCGTCACCCCGTCCAGCCGCCTGGCGATGCCGGAGATC
GGCATCGGCCTGTACCCGGACGTCGGCGCCAGCTGGTTCCTCGCCCGCCTGCCCGGCAGGCTCGGCCTGTTC
CTCGGCCTGAGCGCGGCGCAGATGAACGCCCGCGACGCTCTCGACCTCGACCTGGCCGACCGCTTCCTTCTC
GACGACCAGCAGGACGCCCTGCTCGCCGGCCTGGTGCAGATGAACTGGAACGAGTCGCCCCAAGTGCAACTT
CACAGCCTGCTTCGCGCCCTCGAACACGAGGCCCGCGGCGAACTGCCGGAGGCCCAGTTGCTCCCGCGCCGG
CCGCGCCTGGACGCACTGCTCGACCAGCCGGACCTGGCGAGCGCCTGGCAGGCGCTGGTGGCGCTGCGCGAC
GACGCCGACCCGCTGCTTGCGCGTGGCGCGAAGACCCTGGCCGAGGGCTGCCCGATGACCGCGCATCTGGTC
TGGCAGCAGATCGAGCGTGCGCGCTACCTGTCGCTGGCCGAGGTGTTCCGCCTGGAATACGCCATGAGCCTG
AACTGCACGCGCCATCCGGACTTCGCCGAGGGGGTACGCGCAAGGCTGATCGATCGCGACAACGCACCGAAC
TGGCATTGGCCGCAGGTGGAATCGATCCCGCAGACGGTGATCGAGGCGCACTTCGAGCCGACCTGGGAGGGC
GAGCATCCGCTGGCGGGGCTCTGA
Translation:
MNVLFEERPSLHGFRIGIATLDAEKSLNALSLPMIEALAAKLDAWAEDAGIACVLLRGNGAKAFCAGGDVRK
LVDACREQPGEVPALARRFFADEYRLDYRIHTYPKPFICWAHGYVMGGGMGLMQGAGIRIVTPSSRLAMPEI
GIGLYPDVGASWFLARLPGRLGLFLGLSAAQMNARDALDLDLADRFLLDDQQDALLAGLVQMNWNESPQVQL
HSLLRALEHEARGELPEAQLLPRRPRLDALLDQPDLASAWQALVALRDDADPLLARGAKTLAEGCPMTAHLV
WQQIERARYLSLAEVFRLEYAMSLNCTRHPDFAEGVRARLIDRDNAPNWHWPQVESIPQTVIEAHFEPTWEG
EHPLAGL*
AnnotationID:1704GeneID:1695
AnnotatorUID: danlee
Modification Date/Time: 2004-04-14 10:10:56
Gene Name:
Confidence Code:3
GeneProduct:probable enoyl-CoA hydratase/isomerase
Cell Localization:()
Synonyms:PA0744
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(20) Putative enzymes
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
KOG1684, Enoyl-CoA hydratase [Lipid transport and metabolism]
    CD-Length = 401 residues,  86.5% aligned
    Score =  254 bits (651), Expect = 2e-68






   
Genomic Context:






   
Comment:


















    ReferenceID:3393




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:20540




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









           
Homologs By Global Alignment 

           

       



     
Gene ID:1695
           
Identity:

                               
                                   0%
                               
                                   10%
                               
                                   20%
                               
                                   30%
                               
                                   40%
                               
                                   50%
                               
                                   60%
                               
                                   70%
                               
                                   80%
                               
                                   90%
                               
                                   100%
                               
                             

                           

     
HomologID
                           Accession
                           Description
                           Length
                           PctIdentity
                           PctSimilarity
                           Gaps
                           Score
     

     
     
2982
                           PA0744_tr
                           translation of PA0744
                           367
                           99.72
                           99.72
                           0
                           1924.0
     

     
     
92990
                           gb|AAG04133.1|AE004509_8
                           (AE004509) probable enoyl-CoA hydratase/isomerase [Pseudomonas aeruginosa PAO1]
                           367
                           99.72
                           99.72
                           0
                           1924.0
     

     
     
92991
                           gb|AAN67034.1|AE016332_4
                           (AE016779) enoyl-CoA hydratase/isomerase family protein [Pseudomonas putida KT2440]
                           368
                           66.84
                           78.26
                           1
                           1334.0
     

     
     
92992
                           gb|AAQ59754.2|
                           (AE016917) enoyl-CoA hydratase [Chromobacterium violaceum ATCC 12472]
                           372
                           47.58
                           61.02
                           8
                           836.0
     

     
     
92995
                           emb|CAE36855.1|
                           (BX640427) enoly-CoA hydratase [Bordetella parapertussis]
                           398
                           45.97
                           58.29
                           39
                           815.0
     

     






      

          
GC ORFID: 44697How Found: BLASTX

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: t_PA0744Glimmer Score: 

          
Start: 108339Stop: 107236

          
Length: 1104


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: t_PA0744 translation of PA0744Homolog Bit Score 745.0

          
Other Homologs:  t_PA0744 (ORF: GLIMMER)

          
GC ORF Sequence

           
ATGAACGTGCTTTTCGAAGAACGCCCGAGCCTGCATGGCTTCCGCATCGGCATTGCCACCCTGGATGCGGAA 
AAGAGCCTGAACGCCCTGTCCCTGCCGATGATCGAGGCCCTGGCGGCGAAACTCGACGCCTGGGCCGAGGAC 
GCCGGCATCGCCTGCGTGCTGTTGCGCGGCAACGGCGCCAAGGCCTTTTGCGCCGGCGGCGACGTGCGCAAG 
CTGGTGGACGCCTGCCGTGAGCAACCCGGCGAGGTACCGGCCCTGGCGCGACGCTTCTTCGCCGATGAATAC 
CGCCTCGACTACCGCATCCACACCTACCCGAAACCCTTCATCTGCTGGGCCCACGGCTATGTAATGGGCGGC 
GGCATGGGGCTGATGCAGGGTGCCGGGATTCGCATCGTCACCCCGTCCAGCCGCCTGGCGATGCCGGAGATC 
GGCATCGGCCTGTACCCGGACGTCGGCGCCAGCTGGTTCCTCGCCCGCCTGCCCGGCAGGCTCGGCCTGTTC 
CTCGGCCTGAGCGCGGCGCAGATGAACGCCCGCGACGCTCTCGACCTCGACCTGGCCGACCGCTTCCTTCTC 
GACGACCAGCAGGACGCCCTGCTCGCCGGCCTGGTGCAGATGAACTGGAACGAGTCGCCCCAAGTGCAACTT 
CACAGCCTGCTTCGCGCCCTCGAACACGAGGCCCGCGGCGAACTGCCGGAGGCCCAGTTGCTCCCGCGCCGG 
CCGCGCCTGGACGCACTGCTCGACCAGCCGGACCTGGCGAGCGCCTGGCAGGCGCTGGTGGCGCTGCGCGAC 
GACGCCGACCCGCTGCTTGCGCGTGGCGCGAAGACCCTGGCCGAGGGCTGCCCGATGACCGCGCATCTGGTC 
TGGCAGCAGATCGAGCGTGCGCGCTACCTGTCGCTGGCCGAGGTGTTCCGCCTGGAATACGCCATGAGCCTG 
AACTGCACGCGCCATCCGGACTTCGCCGAGGGGGTACGCGCAAGGCTGATCGATCGCGACAACGCACCGAAC 
TGGCATTGGCCGCAGGTGGAATCGATCCCGCAGACGGTGATCGAGGCGCACTTCGAGCCGACCTGGGAGGGC 
GAGCATCCGCTGGCGGGGCTCTGA