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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG07555.1|AE004833_6 (AE004833) probable TonB-dependent receptor [Pseudomonas aeruginosa PAO1]
Identities = 800/802 (99%), Positives = 801/802 (99%)
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Sequence:
ATGAAACACGTCGTTTCCAGTGCGTTATTGCTCGGTCTCTCCTCGCTTTCCCTGGCCGCCCAGGCCGCTCCC
ATCGCCCTTGACCTTCCCGCCCAGCCCCTGGCCGCATCCCTCGAGCAATTGCAGGGCGCCAGCGGCCTGCGC
ATCCGTTTCGACCGCGCGGCCGTGGCCGACCGGCGCGCACCGGCCCTACGCGGCACGCTGGAGCCGAGCGAG
GCACTGCAGCGTCTGCTCGCAGGTTCCGGACTGAGCGGGGAGGTACGGGGCGGCGACGCCTGGGTCGAGGCC
GCGCCGACAGGTGCCGGCATCGCCCCCGGCGACAGCGTCGACCTCGGCGCGCTCAGCGTGGTCGCCACCCAG
GACCCGGCCACCGCCGCCATCACCGAAGACAGCGGCTCCTACACCACCCGGGCGATGCGCACCTCGACCAAG
CTGGCGATGTCGATCCGCGAGACCCCTCAGTCGGTCAGCGTGGTCACCCGCCAGCGCATGGACGACCAGGGC
ATGCGCGACCTCAACGACGCGGTGAAGGGCGTCACCGGCCTCACCGTGCAACAGTACGGGCCGGCCCGGGTG
AAGTACGCGGCGCGCGGCTTCGACGTCGACAACATCATGTACGACGGCCTGCCGACGAGCATTTCCACCTAT
ACCCAGGACGTCATTTCCGCCGCCGACCTGGCCATGTTCGACCGCGTCGAAGTGGTGCGCGGTGCCACCGGC
CTGATGCAGGGCGCAGGCAACCCGGCGGCGGCGATCAACATGGTGCGCAAGCGTCCGACCCAGGACTTCCGC
GCCTCCCTGCAAGGCAGCGTCGGCACCTGGGACCGCTATCGCAGCGAGGCCGACGTTTCCGGTCCGCTGAAC
AGCGAAGGAACCCTGCGCGGCCGCGCGGTGGTCGCCTACCAGAAAGGCAACAGTTTCCAGGACCACGTCAGC
AGCGAACGCGGCGTGTTCTACGGGATCGCCGAAGCCGACCTGAGCCCGGACACCACCTTCGCCATCGGCGCC
TCGAACCAGAACGACAACCGCAACGACAACTGGGTAGGCCTGCCCAGCCCGCTGGGCGGCCGCCACCTGGAC
CTCAAGCGCTCGTCCTACTACGGCGCCGACTGGTCCTACTGGGATACCGACACCACCCACCTGTTCAGCGAC
CTGACCCACCGCTTCGCCAACGGTTGGCAGATGAAGCTGGCCGCCGACAAGCTGTGGGCGCGAATCAACATG
CTCGGGCTGTACAACGACTGCTACTACTCGACCACCGGCTGCGCCAGCATGACCCAGAACCCCGGCGACTAC
AGCTACACCGACGACCACGACAGCTATGACGCCTATGCCAACGGTCCCTTCCAGTTGCTCGGCCGCGAGCAC
GAGCTGGTGGTCGGCGCCAGCTATCGCCAGGAACGCTTCGACGGCCACGGCGGCTGGGGCAGCCTGTTCAAC
AAGGACGGCACCCCGACCGGGCCGATGGACCCGACCCAATGGGACCCGAGCTCGACTCTCAAGCCGAGGCTG
AACACCAGCCTGTGGGGCATGAAGCTCGACCAGGAACAGAAAGGCGCCTACCTCACCACCCGGTTGAACCTC
GCCGACCCGCTGAAAGTGATCCTCGGCGGGCGCCTGGACTGGTACAAGGCCGACGCCGATACCGACAGCTAC
AAGGTCACCCGCAACGTCACCCGCTATGCCGGGGTGATCTACGACCTGAACCAGACCTACTCGGTCTACGCC
AGCTATACCGACATCTTCAAGCCGCAGAGCAACTTCGACGCCGGCGGCGGCCTGCTCGACCCGATCACCGGC
AAGAACTACGAGATCGGCCTGAAGGGCGAACACTTCGGCGGCGCGCTCAATTCGCAGATCGCGCTGTTCCAG
ATCGACCAGGAAAACCGCGCCACCGAGGACGTCGGCGGCCCCTCGCCATGCCCCTTCAGCCCCACCTCGCGC
TATTGCTCGCGCGCTTCGGGCAAGGTCCGCAGCCAGGGCGTCGACCTGGAGCTGAGCGGTGCGCTGAGCGAC
GACTGGCAGATGATGGCCGGCTATACCTACGTCGACGCCAAGTACAAGCACGACAGCAACAAGGCCAACGAG
GGCAAGCCATTCGACGCGGCCAAGCCACGCCACCTGTTCAAGCTCGCCACCAGCTACACGCTACCCGGCGAA
CTGCACAAATGGCGCGTCGGCGGCGACCTGGCCACCCAGAGCAAGACCGAGGACAGCAGCACCGGTTTCCAG
CAGGGCGGCTACACCGTGGTCAATGCCATGCTCGGCTACAAGGTCAACGAACGGATCGACACGCGGCTGAAC
TTCAACAACCTGTTCGACAAGTACTATTACAGCGGCATCGACTTCGGCAACCTCAACTACGGCGAGCCGCGC
AACCTGATGTTCACGGTGAAGTACTCGCTCTGA |
Translation:
MKHVVSSALLLGLSSLSLAAQAAPIALDLPAQPLAASLEQLQGASGLRIRFDRAAVADRRAPALRGTLEPSE
ALQRLLAGSGLSGEVRGGDAWVEAAPTGAGIAPGDSVDLGALSVVATQDPATAAITEDSGSYTTRAMRTSTK
LAMSIRETPQSVSVVTRQRMDDQGMRDLNDAVKGVTGLTVQQYGPARVKYAARGFDVDNIMYDGLPTSISTY
TQDVISAADLAMFDRVEVVRGATGLMQGAGNPAAAINMVRKRPTQDFRASLQGSVGTWDRYRSEADVSGPLN
SEGTLRGRAVVAYQKGNSFQDHVSSERGVFYGIAEADLSPDTTFAIGASNQNDNRNDNWVGLPSPLGGRHLD
LKRSSYYGADWSYWDTDTTHLFSDLTHRFANGWQMKLAADKLWARINMLGLYNDCYYSTTGCASMTQNPGDY
SYTDDHDSYDAYANGPFQLLGREHELVVGASYRQERFDGHGGWGSLFNKDGTPTGPMDPTQWDPSSTLKPRL
NTSLWGMKLDQEQKGAYLTTRLNLADPLKVILGGRLDWYKADADTDSYKVTRNVTRYAGVIYDLNQTYSVYA
SYTDIFKPQSNFDAGGGLLDPITGKNYEIGLKGEHFGGALNSQIALFQIDQENRATEDVGGPSPCPFSPTSR
YCSRASGKVRSQGVDLELSGALSDDWQMMAGYTYVDAKYKHDSNKANEGKPFDAAKPRHLFKLATSYTLPGE
LHKWRVGGDLATQSKTEDSSTGFQQGGYTVVNAMLGYKVNERIDTRLNFNNLFDKYYYSGIDFGNLNYGEPR
NLMFTVKYSL* |
AnnotationID:178 | GeneID:168 |
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Modification Date/Time: |
2005-10-24 13:01:30 |
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GeneProduct: | type I ferripyoverdine receptor, FpvB |
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Cell Localization Confidence Code: | 5 |
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MolecularFunction: | Fe(III) updatke |
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Functional Category: | (27) Transport of small molecules |
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Alternate Gene Product Name: | putative outer membrane ferripyoverdine receptor |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | membrane protein |
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Homology: | >gb|AAN69798.1|AE016617_1 (AE016789) outer membrane ferripyoverdine receptor [Pseudomonas
putida KT2440]
Length = 812
Score = 746 bits (1927), Expect = 0.0
Identities = 402/822 (48%), Positives = 525/822 (63%), Gaps = 56/822 (6%)
>gb|AAO57161.1| (AE016869) TonB-dependent siderophore receptor [Pseudomonas
syringae pv. tomato str. DC3000]
Length = 722
Score = 596 bits (1537), Expect = e-169
Identities = 335/716 (46%), Positives = 430/716 (60%), Gaps = 44/716 (6%)
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Structural Features: | COG4773, FhuE, Outer membrane receptor for ferric coprogen
and ferric-rhodotorulic acid
[Inorganic ion transport and metabolism]
CD-Length = 719 residues, 100.0% aligned
Score = 846 bits (2188), Expect = 0.0
Identities = 362/765 (47%), Positives = 456/765 (59%), Gaps = 52/765 (6%)
cd01347, ligand_gated_channel
CD-Length = 672 residues, 99.9% aligned
Score = 302 bits (775), Expect = 9e-83
pfam00593, TonB_dep_Rec, TonB dependent receptor.
CD-Length = 712 residues, 99.9% aligned
Score = 266 bits (681), Expect = 6e-72
Identities = 182/724 (25%), Positives = 265/724 (36%), Gaps = 85/724 (11%) |
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