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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG04924.1|AE004582_2 (AE004582) probable acyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
Identities = 381/382 (99%), Positives = 382/382 (100%)
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Sequence:
ATGACTGACTTCCAGCAGTACTTCGACGAGTCCCATCAACTGATCCGGGATTCGGTGCGCCGTTTCGTCGAG
CGCGAGGTGTTGCCGCACATCGATGAATGGGAGGAGGCCGAGGAATTTCCCCGTGAACTCTATCTCAAGGCC
GGCGCGGCCGGGATCCTCGGCATCGGCTACCCGGAAGCCTACGGCGGCAGTTGCGAAGGCGATCTGTTCGCC
AAGGTGGCGGCCAGCGAAGAGCTCATGCGCTGCGGTTCCGGCGGCTTGGTCGCCGGGTTGGGATCGCTGGAT
ATCGGCTTGCCTCCGGTGGTCAAGTGGGCCCGTCCCGAGGTGCGCGAGCGGGTGGTGCCGGCGGTGCTGCGC
GGCGAGAAGATCATGGCCCTGGCGGTCACCGAGCCCTCTGGCGGCTCCGACGTGGCCAACCTGAAGACCCGT
GCGGTGCGCGATGGCGATCACTATCGCGTCAGCGGCAGCAAGACCTTCATCACCAGCGGCGTGCGCGCGGAC
TACTACACGGTGGCGGTGCGTACCGGCGGCGAGGGTTTCGCCGGCATCAGCCTGCTGCTGGTGGAGAAGGGC
ACTGCCGGGTTCAGTGTCGGCCGCAAGCTGAAGAAGATGGGCTGGTGGGCGTCGGATACCGCCGAACTGTTC
TTCGACGACTGCCGGGTGCCTGCGGAAAACCTGATCGGCGTGGAGAACGCTGGCTTCGCCTGCATCATGGCC
AATTTCCAGAGCGAGCGCCTGGCCCTGGCGGTGATGGCCAACATGACCGCGCAACTGGCTCTGGAGGAGTCG
CTGCGCTGGGCGCGCGAGCGAGAAGCGTTCGGCAAGCCGATCGGCAAGTTCCAGGTGCTGCGCCATCGTCTC
GCGGAAATGGCCACGCAACTGGAGGTTTCCCGCGAGTTCACCTATCGCCAGGCAGCGAAGATGGCTGCCGGC
AAGAGCGTGATCAAGGAGATATCGATGGCCAAGAACTTCGCTACCGATGTCGCCGATCGCCTGACCTATGAT
GCCGTGCAGGTGCTCGGCGGCATGGGCTACATGCGCGAAAGCCTGGTGGAGCGGCTGTATCGCGACAACCGG
ATTCTCTCCATCGGCGGCGGTTCGCGGGAAATCATGAACGAGATCATCGGCAAGCAGATGGGGTTGTAG |
Translation:
MTDFQQYFDESHQLIRDSVRRFVEREVLPHIDEWEEAEEFPRELYLKAGAAGILGIGYPEAYGGSCEGDLFA
KVAASEELMRCGSGGLVAGLGSLDIGLPPVVKWARPEVRERVVPAVLRGEKIMALAVTEPSGGSDVANLKTR
AVRDGDHYRVSGSKTFITSGVRADYYTVAVRTGGEGFAGISLLLVEKGTAGFSVGRKLKKMGWWASDTAELF
FDDCRVPAENLIGVENAGFACIMANFQSERLALAVMANMTAQLALEESLRWAREREAFGKPIGKFQVLRHRL
AEMATQLEVSREFTYRQAAKMAAGKSVIKEISMAKNFATDVADRLTYDAVQVLGGMGYMRESLVERLYRDNR
ILSIGGGSREIMNEIIGKQMGL* |
AnnotationID:1685 | GeneID:1676 |
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Modification Date/Time: |
2005-05-30 07:07:43 |
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GeneProduct: | putative acyl-CoA dehydrogenase |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (20) Putative enzymes |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | fatty acid and phospholipid metabolism |
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Homology: | >dbj|BAC46246.1| (AP005938) acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA
110]
Length = 409
Score = 405 bits (1041), Expect = e-112
Identities = 205/376 (54%), Positives = 263/376 (69%), Gaps = 2/376 (0%)
>gb|AAN38728.1| (AF513500) putative acyl CoA dehydrogenase [Mycobacterium
abscessus]
Length = 399
Score = 370 bits (951), Expect = e-102
Identities = 193/363 (53%), Positives = 248/363 (68%)
>emb|CAE36160.1| (BX640424) acyl-CoA dehydrogenase [Bordetella parapertussis]
Length = 385
Score = 322 bits (825), Expect = 2e-87
Identities = 174/374 (46%), Positives = 237/374 (63%), Gaps = 4/374 (1%)
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Structural Features: | cd01160, LCAD, Long chain acyl-CoA dehydrogenase (LCAD)
CD-Length = 372 residues, 100.0% aligned
Score = 430 bits (1107), Expect = 1e-121
cd01158, SCAD/SBCAD, Short chain acyl-CoA dehydrogenase (SCAD).
CD-Length = 373 residues, 99.5% aligned
Score = 339 bits (870), Expect = 4e-94
cd00567, ACAD, Acyl-CoA dehydrogenase (ACAD).
CD-Length = 369 residues, 100.0% aligned
Score = 323 bits (828), Expect = 3e-89
cd01156, IVD, Isovaleryl-CoA dehydrogenase (IVD)
CD-Length = 376 residues, 99.2% aligned
Score = 291 bits (747), Expect = 8e-80 |
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