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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG07386.1|AE004817_10 (AE004817) D-ala-D-ala-carboxypeptidase [Pseudomonas aeruginosa PAO1]
Identities = 386/386 (100%), Positives = 386/386 (100%)
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Sequence:
ATGAACATCACCACTATCGCGAAACGCTTGTCACTGCTTGTCCTGTTCATCGCCCCTACGGCTGGCTGGGCT
GCTGAATCCATGGTTCCGGCGCCGCCGCAACTGGCCGCCAAGTCGTACGTCCTGATGGACGGCGAGAGCGGC
CAGGTTCTGGTCGAGAACAACGGCGACCAGCGCCTGCCGCCGGCCAGCCTGACCAAACTGATGACCGCCTAC
ATCGCCACCAAGGAGATCGAGGCCGGCCGCATCGGCGAGAACGACCTGGTCACCGTCAGCGAACATGCCTGG
CGCACCGGCGGTTCGCGGATGTTCATCAAGGTCGGCAGCCAGGTCTCGGTGAGCGACCTGCTGCATGGCATC
ATCATCCAGTCCGGCAACGACGCCAGCGTCGCCCTGGCCGAGCATATCGCCGGCAGCGAAGACGCCTTCGCC
GACATGATGAACACCACCGCGCAGAAGCTGGGCCTGACCAACTCCCACTTCATGGACGCCACCGGCCTGCCC
AACCCGGACCACTATTCCTCCGCCCGCGACATGGCGGTGCTGGCCCGCGCGATCATCTACGGCGAGCCGAGC
CACTACGCGATCTACGCGCAGAAGGAATTCCTCTGGAACAACATCAAGCAGCCGAACCGCAACCTGCTGCTG
TGGCGCGACAAGACCGTCGACGGCCTGAAGACCGGCCACACCGACGAAGCCGGCTACTGCCTGGTGGCTTCC
GCGGTACGCGACGGCCAGCGCATGATCGCCGTGGTGTTCGGCACCAACAGCGAGCAGGCCCGCGCTGCCGAG
ACCCAGAAGCTGCTGACCTATGGCTTCCGCTTCTTCGAAAGCCGCAACTTCTACAAGAAGGGCACCGAGCTG
ACCAAGGGCCTGGTCTGGAAGGGTTCCGAGCATGAAGTGAAAGCCGGCCTCGCCGAAGACCTGACCATGACC
CTGCCGCGCGGCCAGATGCAGAAGCTGCAGGCCAGCATGGTCCTGGAGCCGCAGCTGATGGCGCCGATCCAG
CAGGGCCAGGTGATCGGCAAGGTGGAAGTGAAGCTGGACGACAAGGTCATCCGCAGCGCCGACCTGGTCGCC
CTCAACGCCGTCGAggAGGGTGGTTTCTTCCGCCGCCTGTGGGATAGCATCCGCCTGTTCTTCTACGGTTTG
TTCAACTGA |
Translation:
MNITTIAKRLSLLVLFIAPTAGWAAESMVPAPPQLAAKSYVLMDGESGQVLVENNGDQRLPPASLTKLMTAY
IATKEIEAGRIGENDLVTVSEHAWRTGGSRMFIKVGSQVSVSDLLHGIIIQSGNDASVALAEHIAGSEDAFA
DMMNTTAQKLGLTNSHFMDATGLPNPDHYSSARDMAVLARAIIYGEPSHYAIYAQKEFLWNNIKQPNRNLLL
WRDKTVDGLKTGHTDEAGYCLVASAVRDGQRMIAVVFGTNSEQARAAETQKLLTYGFRFFESRNFYKKGTEL
TKGLVWKGSEHEVKAGLAEDLTMTLPRGQMQKLQASMVLEPQLMAPIQQGQVIGKVEVKLDDKVIRSADLVA
LNAVEEGGFFRRLWDSIRLFFYGLFN* |
AnnotationID:1639 | GeneID:1630 |
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Modification Date/Time: |
2006-02-06 01:01:55 |
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GeneProduct: | D-ala-D-ala-carboxypeptidase |
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Cell Localization: | (8) Periplasmic |
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Cell Localization Confidence Code: | 2 |
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Functional Category: | (7) Cell wall / LPS / capsule |
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Alternate Gene Product Name: | penicillin-binding protein 6 precursor |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAN70372.1|AE016679_4 (AE016792) D-alanyl-D-alanine carboxypeptidase [Pseudomonas putida
KT2440]
Length = 386
Score = 629 bits (1622), Expect = e-180
Identities = 311/386 (80%), Positives = 348/386 (90%)
>gb|AAO58250.1| (AE016873) D-alanyl-D-alanine carboxypeptidase [Pseudomonas
syringae pv. tomato str. DC3000]
Length = 386
Score = 626 bits (1615), Expect = e-179
Identities = 308/386 (79%), Positives = 345/386 (89%)
>gb|AAN79397.1|AE016758_1 (AE016758) Penicillin-binding protein 6 precursor [Escherichia coli
CFT073]
Length = 407
Score = 341 bits (875), Expect = 4e-93
Identities = 183/383 (47%), Positives = 257/383 (67%), Gaps = 10/383 (2%) |
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Structural Features: | gnl|CDD|11397 COG1686, DacC, D-alanyl-D-alanine carboxypeptidase
[Cell envelope biogenesis, outer membrane]
Length = 389
Score = 427 bits (1100), Expect = e-120
Identities = 194/389 (49%), Positives = 264/389 (67%), Gaps = 5/389 (1%) |
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