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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG08430.1|AE004917_9 (AE004917) penicillin-binding protein 1A [Pseudomonas aeruginosa PAO1]
Identities = 820/823 (99%), Positives = 820/823 (99%), Gaps = 1/823 (0%)
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Sequence:
ATGCGCCTGCTGAAGTTCCTGTGGTGGACTTGCGTCACCCTGATTTGTGGAGTGCTGCTCAGTTTCAGCGGC
GCCTATCTCTATCTGAGTCCCAGCCTGCCCTCGGTGGAAGCTCTGCGTAACGTCCAGCTGCAGATCCCCCTC
AAGGTCTACAGCGAGGACGGCAAGCTGATCTCCGAGTTCGGCGAGATGCGCCGGACGCCGATCCGCTTCGCC
GACATCCCGCAGGACTTCATCCATGCCCTGCTGTCCGCCGAGGACGACAATTTCGCCAACCATTATGGCGTC
GATGTGAAAAGCCTAATGCGCGCCGCCGCGCAATTATTGAAAAGCGGTCACATCCAGACTGGCGGCAGCACC
ATCACCATGCAGGTAGCGAAGAACTACTTCCTTACCAATGAAAGAAGCTTCTCGCGAAAGATCAATGAAATC
CTCCTGGCCCTGCAGATCGAGCGACAGCTGACCAAGGACGAGATCCTCGAGCTCTACGTCAACAAGATCTAC
CTGGGCAACCGTGCCTATGGCATCGAGGCTGCCGCACAGGTCTATTACGGCAAGCCGATCAAAGACTTGAGC
CTGGCCGAGATGGCGATGATCGCCGGCCTGCCGAAAGCGCCCTCGCGCTACAACCCGCTGGTCAACCCGACC
CGCAGTACGGAGCGGCGCAACTGGATCCTCGAGCGCATGCTCAAGCTCGGCTTCATCGACCAGCAACGCTAC
CAGGCCGCCGTCGAGGAGCCGATCAACGCCTCCTACCACGTGCAGACCCCCGAACTGAATGCGCCCTACATC
GCCGAGATGGCCCGTGCCGAGATGGTCGGCCGCTACGGCAGCGAGGCCTATACCGAGGGCTACAAGGTCATC
ACCACGGTCCGCAGCGACCTGCAGAACGCCGCCAGCCAATCGGTCCGCGACGGCCTCATCGACTATGACCAG
CGCCACGGCTACCGCGGCCCGGAGACCCGCCTGCCGGGCCAGACCCGCGACGCCTGGCTCAAGCACCTGGGC
CAGCAGCGCAGCATCGGCGGCCTGGAGCCGGCGATCGTCACCCAGGTGGAAAAGAGCGGGATCATGGTGATG
ACCCGCGACGGCAAGGAAGAAGCCGTGACCTGGGACAGCATGAAATGGGCCCGCCCCTTCCTCAGCAACAAC
AGCATGGGCCCGATGCCGCGCCAGCCCGCCGACGTGGCCCAGGCCGGCGACCAGATCCGCGTGCAGCGCCAG
GAAGACGGCACCCTGCGCTTCGTACAGACTCCCGCCGCACAGAGCGCGCTGATCTCCCTGGACCCGAAGGAC
GGGGCGATCCGCTCGCTGGTCGGCGGCTTCTCCTTCGAGCAGAGCAACTACAACCGCGCGATCCAGGCCAAG
CGCCAGCCGGGCTCCAGTTTCAAGCCGTTCATCTACAGCGCGGCCCTGGACAACGGCTTCACCGCCGCCAGC
CTGGTCAACGATGCGCCGATCGTGTTCGTCGACGAGTACCTGGACAAGGTCTGGCGACCGAAGAACGACACC
AATACCTTCCTCGGCCCGATCCCGCTGCGCGAAGCCCTGTACAAGTCCCGCAACATGGTCTCGATCCGCGTC
CTGCAGGGCCTGGGCATCGAGCGGGCGATCAGCTACATCACCAAGTTCGGCTTCCAGCGCGACGAACTGCCG
CGCAACTTCTCCCTGGCCCTGGGTACCGCGACAGTCACACCGATGGAAATCGCCGGCGCCTGGAGCGTATTC
GCCAACGGCGGCTACAAGGTCAATCCGTACGTCATCGAACGCATCGAGAGCCGCGACGGACAGGTGCTGTAC
CAGGCCAATCCGCCCCGCGTGCCGGTGGAAGAACAGGTCGCTGCGCCGGATGCGGAAGACGCCGGGAAACCT
GGCGACCCCGAGCATCCGGAGAGCGCCGAAGGCGAAGGTTCGATCGAAGCCCAGCAAGTCGCCGCCAAGGCC
CAGACCACCTTCGAGCCGACCCCGGCCGAACGGATCATCGATGCCCGTACCGCCTATATCATGACCAGCATG
CTGCAGGACGTGATCAAGCGCGGTACCGGGCGCCGCGCCCTGGCGCTGAAGCGCACCGACCTGGCCGGCAAG
ACCGGCACCACCAACGATTCCAAGGATGGCTGGTTCTCCGGCTACAACTCCGACTACGTGACCAGCGTCTGG
GTCGGCTTCGACCAGCCGGAGACCCTGGGTCGCCGCGAGTACGGCGGTACCGTCGCGCTGCCGATCTGGATC
AGGTACATGGGCTTCGCCCTCAAGGACAAGCCGATGCACACCATGGCCGAGCCGCCAGGCATCGTCAGCCTG
CGCATCGACCCGGTAACCGGCCGTTCGGCCGCGCCGGGCACTCCCGGCGCCTATTTCGAGATGTTCAAGAAC
GAGGACACCCCGCCCTCGGTCAACGAACTGCCGCCGGGCAGCTTCCCTGGCAGCCCGCTGCCGGATGACGAA
GGCGCGCCGATCGACCTGTTCTGA |
Translation:
MRLLKFLWWTCVTLICGVLLSFSGAYLYLSPSLPSVEALRNVQLQIPLKVYSEDGKLISEFGEMRRTPIRFA
DIPQDFIHALLSAEDDNFANHYGVDVKSLMRAAAQLLKSGHIQTGGSTITMQVAKNYFLTNERSFSRKINEI
LLALQIERQLTKDEILELYVNKIYLGNRAYGIEAAAQVYYGKPIKDLSLAEMAMIAGLPKAPSRYNPLVNPT
RSTERRNWILERMLKLGFIDQQRYQAAVEEPINASYHVQTPELNAPYIAEMARAEMVGRYGSEAYTEGYKVI
TTVRSDLQNAASQSVRDGLIDYDQRHGYRGPETRLPGQTRDAWLKHLGQQRSIGGLEPAIVTQVEKSGIMVM
TRDGKEEAVTWDSMKWARPFLSNNSMGPMPRQPADVAQAGDQIRVQRQEDGTLRFVQTPAAQSALISLDPKD
GAIRSLVGGFSFEQSNYNRAIQAKRQPGSSFKPFIYSAALDNGFTAASLVNDAPIVFVDEYLDKVWRPKNDT
NTFLGPIPLREALYKSRNMVSIRVLQGLGIERAISYITKFGFQRDELPRNFSLALGTATVTPMEIAGAWSVF
ANGGYKVNPYVIERIESRDGQVLYQANPPRVPVEEQVAAPDAEDAGKPGDPEHPESAEGEGSIEAQQVAAKA
QTTFEPTPAERIIDARTAYIMTSMLQDVIKRGTGRRALALKRTDLAGKTGTTNDSKDGWFSGYNSDYVTSVW
VGFDQPETLGRREYGGTVALPIWIRYMGFALKDKPMHTMAEPPGIVSLRIDPVTGRSAAPGTPGAYFEMFKN
EDTPPSVNELPPGSFPGSPLPDDEGAPIDLF* |
AnnotationID:171 | GeneID:161 |
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Modification Date/Time: |
2005-04-26 10:10:29 |
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GeneProduct: | penicillin-binding protein 1A |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (7) Cell wall / LPS / capsule |
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Alternate Gene Product Name: | peptidoglycan synthetase |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | central intermediary metabolism |
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Homology: | >gb|AAN70649.1|AE016709_1 (AE016793) penicillin-binding protein [Pseudomonas putida KT2440]
Length = 817
Score = 1233 bits (3189), Expect = 0.0
Identities = 602/823 (73%), Positives = 699/823 (84%), Gaps = 7/823 (0%)
>gb|AAO58560.1| (AE016874) penicillin-binding protein [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 814
Score = 1221 bits (3158), Expect = 0.0
Identities = 599/824 (72%), Positives = 698/824 (84%), Gaps = 12/824 (1%)
>gb|AAK00346.1|AF329876_2 (AF329876) putative penicillin binding protein [Acinetobacter sp.
BD413]
Length = 852
Score = 671 bits (1730), Expect = 0.0
Identities = 352/747 (47%), Positives = 475/747 (63%), Gaps = 20/747 (2%) |
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Structural Features: | COG5009, MrcA, Membrane carboxypeptidase/penicillin-binding protein
[Cell envelope biogenesis, outer membrane]
CD-Length = 797 residues, 99.9% aligned
Score = 1038 bits (2685), Expect = 0.0
Identities = 411/834 (49%), Positives = 525/834 (62%), Gaps = 49/834 (5%)
pfam00912, Transgly, Transglycosylase.
CD-Length = 169 residues, 99.4% aligned
Score = 249 bits (637), Expect = 1e-66
Identities = 97/168 (57%), Positives = 123/168 (73%), Gaps = 1/168 (0%) |
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