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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG06980.1|AE004779_12 (AE004779) conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 391/395 (98%), Positives = 391/395 (98%)
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Sequence:
ATGACCAATCAGACGGGCGCCCTGCGTGGCCTGAAAATCATCGATCTCAGCCGGGTCCTCGGCGGACCCTAC
TGCTCCCAGGCGCTGGCCGACCACGGCGCCGAGGTGATCAAGCTGGAACCCCTCGGCGGCGACGAGACCCGT
GGCTGGGGGCCGCCCTTCGAGGGCGACACGGCGTCCTACTTCAAGGGCGTGAACCGCAACAAGAAGGGCATC
GCCGTCGACCTGGCGACGGCGGAGGGCATCGAGCTGCTGCTGCGCTTGCTGGAGGACGCCGACGTACTGCTG
GAGAACTTCAAGCCCGGCACCCTGGCGCGTTGGGGGATCGGCTACGAGGAGGTGCTTCGCCAGCGCTTCCCA
CGGCTGGTCCACTGCGCGGTATCGGGCTTCGGCGCCGACGGCCCGCTCGGCGGCCTGCCCGGCTACGACGCG
GCGATCCAGGCTATGGCCGGACTGATGAGCGTGAACGGCGAGGCCGGCGGCGACGCGTTGCGCATCGGCCTG
CCGATCGTCGACATGGTCACCGGGCTGAACGCCATGGCCGGCATCCTCCTCGCCCTCCACGAGCGCCAGGTC
AGCGGGCGCGGGCAGTCGGTGGACATCGCCCTGTACGACTGCGGTATCTCCCTGCTGCACCCGCACCTGCCG
AACTACTTCGCTTCCGGACGTACGCCCCGGCGTAGCGGCAACGCCCATCCGAACATCGCGCCCTACGACAGC
TACCGCACCGGTACCGAGCCGATCTTCCTCGCCGTCGGCAACGACCGCCAGTTCGCCCGCCTGTGCGAGTAC
CTGGGAGCCGATGAACTGCCGGGGGACCCGCGCTTCGCCGACAACGGCAAGCGCTCGGTCAACCGCGAGGCG
CTGAAGCGCGCCCTGGAGGACTACCTGGCGGCCCACGACGGTCGCGAGCTGGCCGAGCTGCTGATCCGTCTC
GGCGTGCCCTGCGGAGTGATCGCCACGGTGGATCGGGTGGTGGAACACCCGCACACCCGCCATCGCGGGATG
GTCGTCGAACTCGAGGGCTATCGCGGCATCGCCTCGCCGGTGAAGCTTTCGCGCACCCCGGCCAGCTACCGC
GCCACGCCGCCGGTACTGGGCGGAGACACCCGGGAAGTCCTGGCGGAACTGGGATTGAGCGCCGAGGCGATC
GACGCGCTGGTCCGGCGCGGCATCGTCCGCGCCTGA |
Translation:
MTNQTGALRGLKIIDLSRVLGGPYCSQALADHGAEVIKLEPLGGDETRGWGPPFEGDTASYFKGVNRNKKGI
AVDLATAEGIELLLRLLEDADVLLENFKPGTLARWGIGYEEVLRQRFPRLVHCAVSGFGADGPLGGLPGYDA
AIQAMAGLMSVNGEAGGDALRIGLPIVDMVTGLNAMAGILLALHERQVSGRGQSVDIALYDCGISLLHPHLP
NYFASGRTPRRSGNAHPNIAPYDSYRTGTEPIFLAVGNDRQFARLCEYLGADELPGDPRFADNGKRSVNREA
LKRALEDYLAAHDGRELAELLIRLGVPCGVIATVDRVVEHPHTRHRGMVVELEGYRGIASPVKLSRTPASYR
ATPPVLGGDTREVLAELGLSAEAIDALVRRGIVRA* |
AnnotationID:1529 | GeneID:1520 |
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Modification Date/Time: |
2005-07-03 09:09:34 |
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GeneProduct: | putative L-carnitine dehydratase |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (13) Fatty acid and phospholipid metabolism |
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Alternate Gene Product Name: | putative acyl-CoA transferases |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | central intermediary metabolism |
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Pathway: | Carnitine metabolism (conversion of carnitine to gamma-butyrobetaine); second step. |
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Homology: | >dbj|BAB61747.1| (AB026669) L-carnitine dehydrogenase-like protein [Acinetobacter
sp. NCIMB9871]
Length = 405
Score = 314 bits (804), Expect = 7e-85
Identities = 171/405 (42%), Positives = 243/405 (60%), Gaps = 19/405 (4%)
>emb|CAD14498.1| (AL646061) PUTATIVE TRANSMEMBRANE PROTEIN [Ralstonia solanacearum]
Length = 420
Score = 300 bits (768), Expect = 1e-80
Identities = 174/406 (42%), Positives = 240/406 (59%), Gaps = 19/406 (4%)
>dbj|BAB60328.1| (AP000995) L-carnitine dehydratase [Thermoplasma volcanium]
Length = 399
Score = 298 bits (764), Expect = 3e-80
Identities = 157/386 (40%), Positives = 229/386 (59%), Gaps = 6/386 (1%)
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Structural Features: | COG1804, CaiB, Predicted acyl-CoA transferases/carnitine dehydratase
[Energy production and conversion]
CD-Length = 396 residues, 100.0% aligned
Score = 406 bits (1044), Expect = 6e-114
Identities = 186/399 (46%), Positives = 234/399 (58%), Gaps = 9/399 (2%)
KOG3957, Predicted L-carnitine dehydratase/alpha-methylacyl-CoA racemase
[Lipid transport and metabolism]
CD-Length = 387 residues, 97.7% aligned
Score = 210 bits (535), Expect = 5e-55
Identities = 121/395 (30%), Positives = 189/395 (47%), Gaps = 25/395 (6%) |
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