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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG05716.1|AE004659_2 (AE004659) hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 398/399 (99%), Positives = 398/399 (99%)
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Sequence:
ATGTGCCTGGACGACCCGACCCATTCCCGACGTGACATCCTCAAGCTCGCCGCGCTGCTCAGCGCCGCCGGC
GCGTTGCCGCTGCTGAGCAGCCTGCAGGCGCGTGCCGCCGCCGAACCCGACGCGCCGGTGCGCATCGGCTAC
CTGCCGATCACCGACGCCACGCCCTTGCTGGTGGCCCATGCCAACGGCCTGTTCGAGGCCGAGGGCATCCAG
GCCGAACGGCCGGTGCTGTTGCGTAGCTGGGCGCAGGTGATCGAGGCGTTCATCTCCGGCCAGGTCAACGTC
ATCCACCTGCTGTCGCCGATGACCGTCTGGGCCCGCTACGGCAGCAAGGTGCCGGCCAAGGTGGTGGCCTGG
AACCACGTCGGCGGCTCGGGGCTCACGGTGGCTCCGGAGATCGACGACGTGCGCCAGCTCGGCGGCAAGAGC
GTGGCGATCCCGTTCTGGTACTCGATCCACAACGTGGTGTTGCAGCAACTGCTGCGCGACAACGGCCTGCGC
GCGGTGAGCCGTGCGGTGGGCGCGGCGCTGGCCGCCGACGAGGTCAACCTGGTGGTGCTGCCGCCTTCGGAC
ATGCCGCCGGCGCTGGCCAGCAAGCGCATCCACGGCTACATCGTCGCCGAGCCGTTCAATGCCCTGGCGGAG
AACCTCAAGGTCGGCCGGGTACAGCGCTTCACCGGCGATGTCTGGCGCAACCACGCCTGCTGCGTGGTGTTC
ATGCACGAACACGACCTGGAGCGGCGGCCGCAGTGGTCGCAAAAGGTGGTCAACGCCATCGTCAAGGCCCAG
CTATGGACTCGCGAGCACCGCGCCGAGGCCGCACAGTTGCTGTCCAAGGCCGGAGCCAACCGCTACACGCCG
CACGCGCCGGAGGTCCTCGGCCGGGTGCTGGCGCCGGGCGCCGAGGAGCAGCAGGCCTATCTCGCCAGCGGC
GCGATCCGCCACGCCGACTGGCAGGAGCGGCGCATCGACTTCCAGCCCTATCCCTATCCGAGCTACACCGAG
GAACTGGTGCGGCGGCTGAAGGACACCCTGATCGAAGGCAATAATGCCTTCCTCGCCAGCCTCGATCCGCGC
CAGGTGGCCAGTGACCTGGTGGACGACCGCTTCGTCCGCCAGGCCCTGGCAGAGGTCGGCGGGTTGCAGGCG
TTCGGCCTCGCCGAGGGCTTCCAGCGCAGCGAGGAGATCAGCCCGTGA |
Translation:
MCLDDPTHSRRDILKLAALLSAAGALPLLSSLQARAAAEPDAPVRIGYLPITDATPLLVAHANGLFEAEGIQ
AERPVLLRSWAQVIEAFISGQVNVIHLLSPMTVWARYGSKVPAKVVAWNHVGGSGLTVAPEIDDVRQLGGKS
VAIPFWYSIHNVVLQQLLRDNGLRAVSRAVGAALAADEVNLVVLPPSDMPPALASKRIHGYIVAEPFNALAE
NLKVGRVQRFTGDVWRNHACCVVFMHEHDLERRPQWSQKVVNAIVKAQLWTREHRAEAAQLLSKAGANRYTP
HAPEVLGRVLAPGAEEQQAYLASGAIRHADWQERRIDFQPYPYPSYTEELVRRLKDTLIEGNNAFLASLDPR
QVASDLVDDRFVRQALAEVGGLQAFGLAEGFQRSEEISP* |
AnnotationID:1496 | GeneID:1487 |
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Modification Date/Time: |
2006-03-31 18:06:59 |
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GeneProduct: | putative sulfonate ABC transporter, periplasmic sulfonate-binding protein |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (27) Transport of small molecules |
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Alternate Gene Product Name: | membrane lipoprotein SrpL |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | membrane protein |
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Homology: | >gb|AAN69236.1|AE016558_6 (AE016787) sulfonate ABC transporter, periplasmic sulfonate-binding
protein, putative [Pseudomonas putida KT2440]
Length = 401
Score = 657 bits (1695), Expect = 0.0
Identities = 325/400 (81%), Positives = 354/400 (88%), Gaps = 2/400 (0%)
>gb|AAD53163.1|AF176824_6 (AF176824) membrane lipoprotein SrpL [Synechococcus sp. PCC 7942]
Length = 407
Score = 448 bits (1152), Expect = e-125
Identities = 221/392 (56%), Positives = 277/392 (70%), Gaps = 7/392 (1%)
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Structural Features: | COG0715, TauA, ABC-type nitrate/sulfonate/bicarbonate
transport systems, periplasmic components
[Inorganic ion transport and metabolism]
CD-Length = 335 residues, 93.4% aligned
Score = 178 bits (451), Expect = 1e-45
Identities = 97/325 (29%), Positives = 144/325 (44%), Gaps = 18/325 (5%) |
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