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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG05381.1|AE004625_11 (AE004625) probable MFS transporter [Pseudomonas aeruginosa PAO1]
Identities = 400/402 (99%), Positives = 401/402 (99%)
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Sequence:
ATGTCCGTCGATATCCGCCCCACCCCGCCGGCGCAGGACAGCGCCCGGCAGAACGTCACCCTGCAGATCGTC
TCGGTGGTGATGTTCACCTTCATCGGCTACCTGACCATCGGCATCCCGCTGGCGGTGCTGCCCGGCTACGTG
CACGACGACCTCGGCTACGGCTCGGTGCTGGCCGGCCTGGTGATCAGCCTGCAGTACCTCGCCACCCTGCTC
GCCCGGCCCTACGCCGGGCGCGTCATCGACGGGCTCGGGCCGAAGCGCGCGGTGCTCTACGGCATGGCCGGC
AGCGCCGCGAGCGGGCTGTTCATGCTGCTCTCGGTGGCGATCCAGGGCTGGCCGGCGCTGAGCCTGGCCAGC
CTGCTGGTCGGCCGCCTGGTACTCGGCGCGGCGGAAAGCCTGGTCGGCTCGGCGGCGATCGGCTGGGGCATC
GGCCGGGTCGGCGCGCCGCACACCGCCAAGGTGATTTCCTGGAACGGCATCGCCAGCTACGGCGCCATCGCC
CTCGGGGCGCCGCTAGGGGTGCTGCTGGTGCAGTGGCTGGGGCTGTGGAGCATGGGCGCGTCCATCGTCCTG
CTCGGGGCGCTCGGCTTCGCCCTGGCCTGGCCGAAGTTGCCGGCGCCGCTGGTGCACGGCGAGCGACTGCCG
TTCCACCATGTGCTCGGCCGGGTCACCCCGCACGGTATGGGCCTGGCGCTGGGGGCGATCGGCTTCGGCACC
ATCGCCACCTTCATCACCCTTTACTACGCCAGCCGTGGCTGGGCCAACGCAGTGCTCTGCCTGAGTGCCTTC
GGCGGTTGCTTCATCGGCGCCCGGCTGTTGTTCGCCAATAGCATCAACCGGCTCGGCGGCTTCCGCGTGGCG
ATCATCTGCCTCGGCGTCGAAAGCCTCGGCCTGCTGTTGCTGTGGAGCGCGCCGAATCCCTGGGTCGGCCTG
GCCGGCGCGGCCCTCACCGGCTTCGGCTTCTCCCTGGTGTTCCCGGCGTTCGGCGTGGAAGCGGTGAACCTG
GTACCGGCTTCCAACCGTGGCGCGGCGCTGGGCGCCTACTCGCTGTTCGTCGACCTGTCGCTGGGCATCACC
GGGCCGCTGGTGGGCTTCGTCGCCAACCTGTTCGGCTTCCGCTCGATGTTCCTCTTCGCCTGCCTGGCCTCG
CTCAGCGGGCTGGCCCTGGCCATTGCGCTGCACCGACGCAGCCGCCGGCCGGGCTAG |
Translation:
MSVDIRPTPPAQDSARQNVTLQIVSVVMFTFIGYLTIGIPLAVLPGYVHDDLGYGSVLAGLVISLQYLATLL
ARPYAGRVIDGLGPKRAVLYGMAGSAASGLFMLLSVAIQGWPALSLASLLVGRLVLGAAESLVGSAAIGWGI
GRVGAPHTAKVISWNGIASYGAIALGAPLGVLLVQWLGLWSMGASIVLLGALGFALAWPKLPAPLVHGERLP
FHHVLGRVTPHGMGLALGAIGFGTIATFITLYYASRGWANAVLCLSAFGGCFIGARLLFANSINRLGGFRVA
IICLGVESLGLLLLWSAPNPWVGLAGAALTGFGFSLVFPAFGVEAVNLVPASNRGAALGAYSLFVDLSLGIT
GPLVGFVANLFGFRSMFLFACLASLSGLALAIALHRRSRRPG* |
AnnotationID:1495 | GeneID:1486 |
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Modification Date/Time: |
2005-03-02 17:05:51 |
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GeneProduct: | putative MFS transporter |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (27) Transport of small molecules |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | carbohydrate transport and metabolism |
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Homology: | >gb|AAO55338.1| (AE016862) transporter, putative [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 399
Score = 558 bits (1438), Expect = e-158
Identities = 280/393 (71%), Positives = 325/393 (82%), Gaps = 6/393 (1%)
>gb|AAL22441.1| (AE008865) putative MFS family transport protein [Salmonella
typhimurium LT2]
Length = 419
Score = 389 bits (999), Expect = e-107
Identities = 205/403 (50%), Positives = 265/403 (65%), Gaps = 7/403 (1%)
>gb|AAN82702.1|AE016768_120 (AE016768) Hypothetical protein yhhS [Escherichia coli CFT073]
Length = 419
Score = 375 bits (963), Expect = e-103
Identities = 201/402 (50%), Positives = 260/402 (64%), Gaps = 7/402 (1%) |
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Structural Features: | COG2814, AraJ, Arabinose efflux permease
[Carbohydrate transport and metabolism]
CD-Length = 394 residues, 99.7% aligned
Score = 71.0 bits (174), Expect = 3e-13
Identities = 94/403 (23%), Positives = 142/403 (35%), Gaps = 19/403 (4%)
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