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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG08573.1|AE004931_10 (AE004931) probable 3-hydroxyacyl-CoA dehydrogenase [Pseudomonas aeruginosa PAO1]
Identities = 405/411 (98%), Positives = 407/411 (99%)
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Sequence:
ATGAGCCAGAACTTTTCCTTCCGCCAGGCCGCGGTGATCGGCGCCGGCACCATGGGTCGCGGTATCGTCATG
TGCCTGGCCAACGCCGGTCTCGACGTGCAGTGGCTGGACAGCAACCCGCAGATGCTCAACCAGGCGCTCGGC
GCCGTGGCCGACACCTACGCGCACAACGTGCGCCAGGGGCGCATCGGCGAAGAGGAAGCGGCCGCGCGCCGC
GCCCGCATCACGCCGGTCCAGCACCTCGCCGCGATGCGCGAGGCGGACCTGGTGATCGAGGCGGTCTACGAG
AACCTGGAACTCAAGCAATCGATCTTCCGCGAGCTGGACGCGGCGCTGAAGCCCTCCGCGGTGCTGGCCAGC
AATACTTCCTACCTGGACATCGACGCCATCGCCGCGGTCACCGCGCGTCCGGGTCAGGTGCTCGGCCTGCAC
TTCTTCAGCCCGGCGCACATCATGCGGCTGCTGGAGATCGTGCGTGGCGCGCAGACCGCGCCGGCGGTGCTG
GAGGCGGCCCTGGCGCTGGGCGAGCGGATGGGCAAGGTCAGCGTAGTGGCCGGCAACTGCCACGGCTTCATC
GGCAACCGCATGCTCGAACCCTACGCCACCGAGGCCCGCCTGATGCTGCTGGAAGGCGCCCTGCCGTACCAG
GTGGACCGGGCTCTCCAGGCGTTCGGTTTCGCCATGGGGCCGTTCCGCATGTACGACGTGGTCGGTATCGAC
CTGGAGTGGCGCGCCCGCGAGTTGGCCGGGGTCGGCCAGGACCAGCCGGCCGTGCAGGTGGACAACCGCCTT
TGCGAGCTGGGCCGCTTCGGCCAGAAGAGCGGTGCCGGTTACTACCGCTACGCGCCGGGCAGCCGCCAGGCG
GAGCACGATACCGAGGTGGATGCCCTGGTGCTCCGGGTTGCCGAGACGCTGGGCTACCCGCGGCGCGATTTC
GTCGACGAGGAAATCCTCGAGCGTTGCCTGCTGGCGCTGGTCAACGAGGGCGCGAAGATCCTCGACGAGGGT
ATCGCCGCCCGTAGCGCCGACATCGACACTGTCTACCTGAACGGCTACGGCTTCCCCGCCGCGGAGGGCGGT
CCCATGGCCTGGGCCGATCGCCTCGGCGCGGCCGAGCTGCTGCAACGCCTGCGTTTCCTCGAGCAGCGCCAC
GGCGTGCGCTGGAAGCCGGCGTCCCTGGTCGAGCGCCTGGCCGCCGAGGGCGGAGCCTTCGCCGACCTGCAG
GAGGCGCGCTGA |
Translation:
MSQNFSFRQAAVIGAGTMGRGIVMCLANAGLDVQWLDSNPQMLNQALGAVADTYAHNVRQGRIGEEEAAARR
ARITPVQHLAAMREADLVIEAVYENLELKQSIFRELDAALKPSAVLASNTSYLDIDAIAAVTARPGQVLGLH
FFSPAHIMRLLEIVRGAQTAPAVLEAALALGERMGKVSVVAGNCHGFIGNRMLEPYATEARLMLLEGALPYQ
VDRALQAFGFAMGPFRMYDVVGIDLEWRARELAGVGQDQPAVQVDNRLCELGRFGQKSGAGYYRYAPGSRQA
EHDTEVDALVLRVAETLGYPRRDFVDEEILERCLLALVNEGAKILDEGIAARSADIDTVYLNGYGFPAAEGG
PMAWADRLGAAELLQRLRFLEQRHGVRWKPASLVERLAAEGGAFADLQEAR* |
AnnotationID:1468 | GeneID:1459 |
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Modification Date/Time: |
2005-03-15 17:05:43 |
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GeneProduct: | putative 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (13) Fatty acid and phospholipid metabolism |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAN67661.1|AE016396_3 (AE016781) 3-hydroxyacyl-CoA dehydrogenase family protein
[Pseudomonas putida KT2440]
Length = 412
Score = 526 bits (1354), Expect = e-148
Identities = 275/404 (68%), Positives = 306/404 (75%)
>emb|CAE44995.1| (BX640412) probable enoyl-CoA hydratase/3-hydroxyacyl-CoA
dehydrogenase, bifunctional enzyme [Bordetella
pertussis]
Length = 705
Score = 378 bits (970), Expect = e-104
Identities = 200/403 (49%), Positives = 269/403 (66%), Gaps = 6/403 (1%) |
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Structural Features: | COG1250, FadB, 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]
CD-Length = 307 residues, 99.0% aligned
Score = 291 bits (747), Expect = 7e-80
Identities = 121/304 (39%), Positives = 174/304 (57%), Gaps = 6/304 (1%)
pfam02737, 3HCDH_N, 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.
CD-Length = 185 residues, 97.8% aligned
Score = 189 bits (481), Expect = 6e-49
Identities = 77/181 (42%), Positives = 118/181 (65%)
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