ViewGene

Locus Name:
GeneID:
Location:

GeneID: 1435

TrivialName: PA14_32750

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_32750

PAO1 Ortholog Locus: PA2465

Sequence Length: 1149

Protein Length: 382

Start: 2844726

Stop: 2845874

Strand: +

Type:

ChromosomeID: 2

Status: ACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAG05853.1|AE004674_3 (AE004674) hypothetical protein [Pseudomonas aeruginosa PAO1] Identities = 381/382 (99%), Positives = 381/382 (99%)

Sequence:

ATGCGCCCCGTCCTGGTTCTGCTGCACCGCTATGTCGGTCTGGCTACCGCGCTGTTCCTTTTCCTCGCCGGT
CTCACCGGCAGCCTGCTGGCCTTCCATCATGAAATCGACGAATGGCTGAACCCCGGCTTCTACGCCGTGGGC
GAGGGCGGCGAGCGCCTTTCCCCGGGCAGCCTGGTGCAACGCGTCGAGTCACGCTATCCGCGACAACTGGTG
TGGTACATGGAGTATCCCGAGGCGGGCGGGCACCCGGCGTTGCTCGCCACCGTGCCGCGCGAGGCCGGCGCC
AAGGTCGAGCACGACGTGTTCTACCTCGACCCGGTCAGCGGCGAGGAAGTCGGCAAGCGCCTCTGGGCGGCC
TGCTGCTTCCAGCCGGCGAACCTGGTTCCCTGGGTCCTGGAGTTCCACCACAACCTGACCCTGCCGGGGAAC
TGGGGCCTGTACCTGATGGGCGGGGTGGCGATGTTCTGGTTCCTCGACTGCTTCGTCGGCGCCTGGCTGACC
CTGCCGCGCGGCCGGCCGTTCTGGAGCAAGTGGGCGACCGCCTGGAAGATCAAGCGCGGCAACGCCTACCGC
TTCAACTTCGACCTGCATCGCGCCGGCGGCCTCTGGCTCTGGCTGCTGCTGGCGCCGGTGGCGCTGAGCAGC
GTCGCCCTGAACCTGCCGAGCCAGGTGTTCAAGCCGCTGGTATCGCTGTTCTCGCCGATCGAACCGAGCGTC
TACGAGGCGCGCGGGCGGCTGCCCAGGGAGCAACTGGGGGAGACCCGCCTGGACTACGACCGCACCTTCCAG
TTGGCCAGCGTCGAAGCGGCGCGGCTGGGCATCGCCGAGCCGATTGGCGAGCTGTACTACAGCTTCGAATAC
AACTTCTTCGGCGCCGGCTTCGGCGACCACGACGACCCCATGGGCAAGTCCTGGCTGTTCTTCCACGGCAGC
GACGGCCGCCTGCTCGGCCAGGAAGTCGCCGGGCAGGGCAGTTGGGGAGAGCGTTTCTACCGCTTGCAGTAC
CCGATCCACGGCGGGCGCATCGCCGGCCTGCCGGGACGCATCGCCATCGCCGCCCTCGGCCTGGCCATCGCC
GGGCTGTCGCTGACCGGTGTCTACATCTGGTGGCGCAAGCGCCGGGCGCGCCACTGGAACGGCCGCTAG

Translation:

MRPVLVLLHRYVGLATALFLFLAGLTGSLLAFHHEIDEWLNPGFYAVGEGGERLSPGSLVQRVESRYPRQLV
WYMEYPEAGGHPALLATVPREAGAKVEHDVFYLDPVSGEEVGKRLWAACCFQPANLVPWVLEFHHNLTLPGN
WGLYLMGGVAMFWFLDCFVGAWLTLPRGRPFWSKWATAWKIKRGNAYRFNFDLHRAGGLWLWLLLAPVALSS
VALNLPSQVFKPLVSLFSPIEPSVYEARGRLPREQLGETRLDYDRTFQLASVEAARLGIAEPIGELYYSFEY
NFFGAGFGDHDDPMGKSWLFFHGSDGRLLGQEVAGQGSWGERFYRLQYPIHGGRIAGLPGRIAIAALGLAIA
GLSLTGVYIWWRKRRARHWNGR*

AnnotationID:1444 GeneID:1435

AnnotatorUID: danlee

Modification Date/Time: 2004-03-08 16:04:48

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms: PA2465

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

Genomic Context:

Comment:

ReferenceID:2873

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:20017

Author/Investigator(s): GenNotator

Title: CDD Search

PubMed:

MedLine:

Source:

Reference Type: RPSBLAST

Data:

URL:

Homologs By Global Alignment

Gene ID:1435

Identity:

10%

20%

30%

40%

50%

60%

70%

80%

90%

100%

HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score

2595 PA2465_tr translation of PA2465 382 99.73 99.73 0 2079.0

81511 gb|AAG05853.1|AE004674_3 (AE004674) hypothetical protein PA2465 [Pseudomonas aeruginosa PAO1] 382 99.73 99.73 0 2079.0

GC ORFID: `44437`	How Found: `BLASTX`
GC_TrimmedSeqID: `69`	Blast Result ID
Subject Sequence Name: `t_PA2465`	Glimmer Score:
Start: `2109198`	Stop: `2108050`
Length: `1149`
Start Codon: `ATG`	Truncated Start:
Stop Codon: `TAG`	Truncated Stop:
Homolog: `t_PA2465 translation of PA2465`	Homolog Bit Score `805.0`
Other Homologs: `t_PA2465 (ORF: GLIMMER)`
GC ORF Sequence
ATGCGCCCCGTCCTGGTTCTGCTGCACCGCTATGTCGGTCTGGCTACCGCGCTGTTCCTTTTCCTCGCCGGT CTCACCGGCAGCCTGCTGGCCTTCCATCATGAAATCGACGAATGGCTGAACCCCGGCTTCTACGCCGTGGGC GAGGGCGGCGAGCGCCTTTCCCCGGGCAGCCTGGTGCAACGCGTCGAGTCACGCTATCCGCGACAACTGGTG TGGTACATGGAGTATCCCGAGGCGGGCGGGCACCCGGCGTTGCTCGCCACCGTGCCGCGCGAGGCCGGCGCC AAGGTCGAGCACGACGTGTTCTACCTCGACCCGGTCAGCGGCGAGGAAGTCGGCAAGCGCCTCTGGGCGGCC TGCTGCTTCCAGCCGGCGAACCTGGTTCCCTGGGTCCTGGAGTTCCACCACAACCTGACCCTGCCGGGGAAC TGGGGCCTGTACCTGATGGGCGGGGTGGCGATGTTCTGGTTCCTCGACTGCTTCGTCGGCGCCTGGCTGACC CTGCCGCGCGGCCGGCCGTTCTGGAGCAAGTGGGCGACCGCCTGGAAGATCAAGCGCGGCAACGCCTACCGC TTCAACTTCGACCTGCATCGCGCCGGCGGCCTCTGGCTCTGGCTGCTGCTGGCGCCGGTGGCGCTGAGCAGC GTCGCCCTGAACCTGCCGAGCCAGGTGTTCAAGCCGCTGGTATCGCTGTTCTCGCCGATCGAACCGAGCGTC TACGAGGCGCGCGGGCGGCTGCCCAGGGAGCAACTGGGGGAGACCCGCCTGGACTACGACCGCACCTTCCAG TTGGCCAGCGTCGAAGCGGCGCGGCTGGGCATCGCCGAGCCGATTGGCGAGCTGTACTACAGCTTCGAATAC AACTTCTTCGGCGCCGGCTTCGGCGACCACGACGACCCCATGGGCAAGTCCTGGCTGTTCTTCCACGGCAGC GACGGCCGCCTGCTCGGCCAGGAAGTCGCCGGGCAGGGCAGTTGGGGAGAGCGTTTCTACCGCTTGCAGTAC CCGATCCACGGCGGGCGCATCGCCGGCCTGCCGGGACGCATCGCCATCGCCGCCCTCGGCCTGGCCATCGCC GGGCTGTCGCTGACCGGTGTCTACATCTGGTGGCGCAAGCGCCGGGCGCGCCACTGGAACGGCCGCTAG