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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG07168.1|AE004797_3 (AE004797) probable transporter [Pseudomonas aeruginosa PAO1]
Identities = 423/426 (99%), Positives = 426/426 (100%)
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Sequence:
ATGATGGCCATCGCCATGATCGCGGCCTTCGTGGTCAACCTCCTGCTCGGCCTGCCGCTGTTCCTCTGCCTG
CTGCTCACCGCGCTGGTGGGGTTCCTCTTCGTCGACCCGGCGCTGTTCGCCAACACCCTGCCGCAGCGCTTC
TTCGGCGGCATGGACATCTTCTCGCTGATGGCGATCCCGCTGTTCGTGCTGGCCGGCAACCTGATGAACCAT
TCCGGCATGACCCCGCGCCTGATGCGCCTGGCCAACGCCCTGGTCGGCCACTTCCGCGGCGGCCTCGGCCAC
GTCAACGTGGTCGCCGGGGTGTTCTTCGCCGGGGTCAACGGGTCCGCCGCGGCCGACGCTTCGGCACTCAGC
ACCCTGCTGGTGCCGGCCATGGAAAAGGAAGGCTACTCGCGGCGCTTCGCCGCCGGGCTGACCGCGGGCAGC
TCGCTGATCGGTCCGATCATCCCGCCGAGCATCTTCATGATCCTCTACTCCTCGCTGACCAACACCTCGGTG
GGCGAGCTGTTCCTCGCCGGGGTGATTCCCGGCCTGCTGCTGGCCGCCGCCTTCATGCTGCTGAACGCGGTG
TACGCCTACCGCAACGGGCTGCAGGCGCGCCATGCGGCACCGGCCTGGGGCGAGATCCTGGCGGCACTGTCC
GGCGCCCTGACCGCGCTGATCGCGCCGGTGATCATCGTCGCCGGAATCGTCCTGGGCCTGGTCACGCCCACC
GAGTCGGGCGCCCTGATCGCCCTCTACGTGGCGCTGGTCGGCCTGCTCCAGCGCCAACTGAGCCTGGTCGGG
CTGTGGAACTCGCTGCGCGAGACGGTACGCCTGACCGCCAGCATCTACGTGATCATCGCCGCCGCCTCGGTG
GTCAACTGGTTGCTCAACTACGCCCAGGTCGCCAGCGAGTTCGCCCAGTTGCTGGAGCCGTTCGGCCACTCG
CCGACCCTGATGCTGTTCATCATCAGTGCGGTGATCTTCGTCTGCGGCATGCTCATGGAGGAGGTCTCGGTA
CTGATGCTGCTGACACCGATAGTCGCTCCGGTGGCGCTGGCCGCCGGCGTGGATCCGGTGCACCTGGGGCTG
ATCTTCACCCTGAACATCACCATCGCCCTGATCACCCCACCAATGGGCGCCTGCCTGTTCATCGTGGCGACC
ATCAGCCGCCTCGATATCCTGGAAATGTTCAAGGGTATCTGGCCGTTCATCCTGCTGGCCCTGGGGGTACTC
TCGCTGCTGATCCTGTTCCCCTCCCTGACCCTGTGGCTGCCACGCCTGCTCAATTGA |
Translation:
MMAIAMIAAFVVNLLLGLPLFLCLLLTALVGFLFVDPALFANTLPQRFFGGMDIFSLMAIPLFVLAGNLMNH
SGMTPRLMRLANALVGHFRGGLGHVNVVAGVFFAGVNGSAAADASALSTLLVPAMEKEGYSRRFAAGLTAGS
SLIGPIIPPSIFMILYSSLTNTSVGELFLAGVIPGLLLAAAFMLLNAVYAYRNGLQARHAAPAWGEILAALS
GALTALIAPVIIVAGIVLGLVTPTESGALIALYVALVGLLQRQLSLVGLWNSLRETVRLTASIYVIIAAASV
VNWLLNYAQVASEFAQLLEPFGHSPTLMLFIISAVIFVCGMLMEEVSVLMLLTPIVAPVALAAGVDPVHLGL
IFTLNITIALITPPMGACLFIVATISRLDILEMFKGIWPFILLALGVLSLLILFPSLTLWLPRLLN* |
AnnotationID:1434 | GeneID:1425 |
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Modification Date/Time: |
2005-04-22 17:05:03 |
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GeneProduct: | putative ABC transport system, membrane protein |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (27) Transport of small molecules |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAO07663.1|AE016810_166 (AE016810) TRAP-type C4-dicarboxylate transport system, large
permease component [Vibrio vulnificus CMCP6]
Length = 427
Score = 305 bits (782), Expect = 3e-82
Identities = 157/413 (38%), Positives = 249/413 (60%), Gaps = 3/413 (0%)
>emb|CAC48687.1| (AL603642) putative permease protein [Sinorhizobium meliloti]
Length = 426
Score = 301 bits (770), Expect = 7e-81
Identities = 154/410 (37%), Positives = 247/410 (60%), Gaps = 4/410 (0%)
>emb|CAE37417.1| (BX640429) Putative ABC transport system, membrane protein
[Bordetella parapertussis]
Length = 426
Score = 295 bits (756), Expect = 3e-79
Identities = 155/420 (36%), Positives = 251/420 (59%), Gaps = 3/420 (0%) |
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Structural Features: | COG1593, DctQ, TRAP-type C4-dicarboxylate transport system,
large permease component
[Carbohydrate transport and metabolism]
CD-Length = 379 residues, 100.0% aligned
Score = 320 bits (821), Expect = 5e-88
Identities = 176/380 (46%), Positives = 247/380 (65%), Gaps = 2/380 (0%)
COG4664, FcbT3, TRAP-type mannitol/chloroaromatic compound transport system,
large permease component
CD-Length = 447 residues, 98.4% aligned
Score = 172 bits (438), Expect = 1e-43
Identities = 124/444 (27%), Positives = 215/444 (48%), Gaps = 23/444 (5%) |
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