|
|
|
Modification Date/Time: | 2006-04-06 13:01:23 |
|
|
|
|
|
|
|
|
|
|
|
|
Missense Discrepancy: | FALSE |
|
Comments: Homology: gb|AAG07525.1|AE004830_6 (AE004830) tyrosyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
Identities = 408/412 (99%), Positives = 410/412 (99%)
|
Sequence:
GTGTCCGTCCCGACCCATCAGCAAGACCTGATCGCCCTGCTCGAAGAGCGTGGCTTCGTCCACCAGTGCACC
GACCGCGACGGCCTCGCCGCGCACCTGGCCGCCGGTCCGGCAACCGCCTACCTGGGCTTCGACGCCACCGCC
GACAGCCTGCACATCGGCCACCTGCAGGGCCTGATGCTGATGCGCTGGCTACAGAAGGCCGGGCACCGTCCG
TTGCTGCTGATCGGTGGCGCGACCACCCGGATCGGCGATCCGAGCTTCCGCGATTCGAGCCGGCCGATCCTC
ACCGAGGCGCAGATCCAGGCCAACATCGACGGCATCGCCCGGGTCTTCTCGCGCTACGTCGAACTGCACGAC
GACAGCCTGGTGAACAACGCCGAATGGCTGGACGGCGTCGGCTACCTGGAGTTCCTCGACCGGGTCGGCCGG
CACTTCTCGATCAACCGCCTGCTGACCTTCGACGCCATCAGGCAGCGCCTGGACCGCGAGCATTCGCTGTCG
TTCCTCGAGTTCGGCTACACCCTGCTGCAGGCCTACGACTTCGTCGAACTGTCGCGCCGGCGCGGCTGCACC
CTGCAACTCGGCGGCGCCGACCAGTGGGCGAACATCATCAACGGCGTGGAGCTGTCGCGACGCCAGGGCGGC
GCCCAACTGTTCGGCCTGACCATGCCGCTGCTGGCCACCAGCGACGGGCGCAAGATGGGCAAGTCGGCGCAG
GGTGCGGTATGGCTCAACGCCGAGCGCCTGGCGCCGTTCGACTTCTGGCAGTTCTGGCGCAACTGCGACGAT
CGCGACGTCGGTCGCTTCCTCGCCCTGTTCAGCGAACTGCCGATGGATGAGGTGCGCCGCCTGGGCGCCTTG
CAGGGCGCCGAGCTGAACGAAGCGAAGGTGGTCCTGGCCAATGCCGCCACCGCCCTGGCGCACGGCGAGCAC
GCCGCGCGATCCGCCGCCGATGCCGCGCGCGGGGTGTTCGCCGACGGTACGCGGGACAGCGGCCTGCCGATG
ATGAAGCTATCCCGCGCGCGCCTGGCGCAGGGACTGTCGCTGACCGACCTGCTGCTGGAGCACGCGATCCAG
CCCTCCCGCAGCGCGGTCCGCCGCCTCGCCGCCGGCGGCGGCCTGCGCCTGGACGGCACGCCGGTCAGCGAT
CCGGACGCGCCGCTGGCGGGCGAGGTCGACGGGCTGCGCCTGAGCCTGGGCAAGAAGCAGCATTTGCAACTG
CGACTCGAGGATTGA |
Translation:
MSVPTHQQDLIALLEERGFVHQCTDRDGLAAHLAAGPATAYLGFDATADSLHIGHLQGLMLMRWLQKAGHRP
LLLIGGATTRIGDPSFRDSSRPILTEAQIQANIDGIARVFSRYVELHDDSLVNNAEWLDGVGYLEFLDRVGR
HFSINRLLTFDAIRQRLDREHSLSFLEFGYTLLQAYDFVELSRRRGCTLQLGGADQWANIINGVELSRRQGG
AQLFGLTMPLLATSDGRKMGKSAQGAVWLNAERLAPFDFWQFWRNCDDRDVGRFLALFSELPMDEVRRLGAL
QGAELNEAKVVLANAATALAHGEHAARSAADAARGVFADGTRDSGLPMMKLSRARLAQGLSLTDLLLEHAIQ
PSRSAVRRLAAGGGLRLDGTPVSDPDAPLAGEVDGLRLSLGKKQHLQLRLED* |
AnnotationID:1415 | GeneID:1406 |
|
Modification Date/Time: |
2005-03-30 14:02:55 |
|
|
|
GeneProduct: | tyrosyl-tRNA synthetase |
|
|
|
Cell Localization Confidence Code: | 5 |
|
|
Functional Category: | (26) Translation, post-translational modification, degradation |
|
Alternate Gene Product Name: | |
|
Functional Category Confidence Code: | 5 |
|
|
Secondary Functional Category(ies): | amino acid biosynthesis and metabolism |
|
|
|
|
Homology: | >dbj|BAB47686.1| (AP002994) tyrosyl-tRNA synthetase [Mesorhizobium loti]
Length = 417
Score = 416 bits (1070), Expect = e-115
Identities = 206/415 (49%), Positives = 274/415 (66%), Gaps = 8/415 (1%)
>gb|AAL52228.1| (AE009544) TYROSYL-TRNA SYNTHETASE [Brucella melitensis 16M]
Length = 417
Score = 414 bits (1064), Expect = e-115
Identities = 203/411 (49%), Positives = 276/411 (67%), Gaps = 8/411 (1%)
|
|
Structural Features: | COG0162, TyrS, Tyrosyl-tRNA synthetase
[Translation, ribosomal structure and biogenesis]
CD-Length = 401 residues, 99.8% aligned
Score = 419 bits (1079), Expect = 3e-118
Identities = 175/409 (42%), Positives = 251/409 (61%), Gaps = 13/409 (3%)
cd00805, TyrRS_core, Tyrosinyl-tRNA synthetase (TyrRS) catalytic core domain.
CD-Length = 268 residues, 99.6% aligned
Score = 267 bits (684), Expect = 2e-72
pfam00579, tRNA-synt_1b, tRNA synthetases class I (W and Y).
CD-Length = 287 residues, 99.0% aligned
Score = 210 bits (535), Expect = 3e-55
Identities = 101/295 (34%), Positives = 151/295 (51%), Gaps = 15/295 (5%)
|
|
|
|
|
|