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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG05364.1|AE004624_3 (AE004624) probable two-component sensor [Pseudomonas aeruginosa PAO1]
Identities = 879/881 (99%), Positives = 880/881 (99%)
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Sequence:
ATGGCATGCATATCAACCAGACCTTCACCGGGGTCGCCATTGGCCGACCCCGTGGAGGTGTCCGTCGCTGAG
CTGCAGGCGCGGGTCGTCGCCCTCGAAGAAGAGCGGCACAAGTTGCAGCGGATCAACCAGGCGCTGATCGGA
CGCATCGAGTCGAGCGCCGCGCAGAGCGACGAGGCCTACGGCGCCTTCCAGTATTCCGTGGTGCTGGCCGAG
CAGGTCCGCGAGCGCACCGACGCGCTGAGCCAGACGATGCTCGAACTGAAGGCCAGCAACCAGTTGCTCAGC
GACGCTCGCCTGCGTGCCGAGACCGCCCACCAGCATCTGCTCGACGCCATCGAAAGCATCTCCGACGCCTTC
GTCCTGTTCGATCCGCAGCAGCGCATCGTGCTGTTCAACGAGCGCTTCCGCGCGCTGTGGGTCGACAGCCGG
GCGCGGATCGGTCCTGGCATGCGCCGCGCCGAACTGCACCGGCTGGCGCGCAGCGGCGGGCTGATCGTCGAG
GAACAGCGCGGCGGCGACCAGCAGACCCTGTATCGCCTGCGCGACGAGCGCTGGCTGCGGATGAGCGAACGG
CCGACCCGCGACGGCGGGCTGGCGGTGCTCTACAGCGACGTCACCGAGATCAAGCTCAGCGAGACCGCGCGC
CGCGAGCAGGCGCTGGCGCAGAAGTCGCACCTGTTGCAGCGGGCGGTGGACAACCTCTCCCAGGGCGTGGCG
ATGGTCGGCGCCGACGGCGTGCTGGAGTTGTGGAACCGGCGCTTCCTGGAACTCTGCGGGCTGGCGCCGATC
GCCGGGCACCGGGCCTTCGCCGAAGTCATGGCGGAGAGCGAATTGCCGTTGCTCACGCCGCGCAGCCAGGAC
TCCCAGGGGAGTCCGCTGAGCGCCCGCGAGCAGCGCCTGTTCGATGGCCGGGTGCTGGAGATCCGTACCCAT
GCGCTGCCCACCGGCGGCTTCGTCAACACCTTCACCGACATCACCGAACGCTATCGCCACGCCGAGGCGTTG
CGCGCCAGCGAGCGCTGGATCCGCCTGATCACCGACCAGGTGCCGGCGCTGATCGCCTATCTCAGCGACGAA
CTGGTCTACGAATTCACCAACAAGGTCTACGAGGAGTGGTACCGCTGGCCCAGCGGCTCGATGCTCGGCCGC
TGCCTGCGCGACGTGCATGGCGCCGAGCACTGCCGGCGCCTGGAGCCGTACTTCGAGCGGGCCCTGGCCGGC
GAAAGCGTGACCTTCGAGATCGCCGAGACCGCGTTGTCCGGCGAGGAGCGCTACATGCAGCGCTCCTACGTG
CCGAACCGCCAGGCCGACGGCCGGGTCGCCGGGCTGTTCGTGCTGATTCGGGATATCACCGAGCGCCGGCGG
ACCGCCGAGGCGCTGCACCAGGCCTACCAGAACCTCGAACAGCGGGTGCGCGAGCGGACCGCCGAGCTGACC
ACCCTCAACGACCAGTTCAAGCGCGAGATCCACGAGCGCAGCCAGGTCGAGGCGCGCCTGCGCGAGGCCAAG
CGCGAGGCGGAACAGGCCAACCTGTCGAAGACCAAGTTCCTCGCGGCGGTCAGCCACGACCTGCTGCAACCG
CTGAACGCCGCGCGGCTGTTCACCAGCGCCTTGCAGGAGCGCGGCAGCGCGACGCGGGACAACGAGGCGCTG
GTGAACAACATCAGCCATTCGCTGGAGGACGTGGAGAACCTGCTCGGCACCCTGGTGGACATTTCCAAGCTG
GACGCCGGCGTGATCACCCCGGACATCGCCCCGTTCGAGCTTGGCGAACTGCTGGGCAACCTGGCCGCGGAG
TACCGCCAGGTAGCCGCCAGCGAAGGCCTGCGCCTGGACTTCGTGGCCTGCGGGGCGCTGGTCCGCAGCGAC
CAGCAACTGCTCGCGCGAATCCTCCGCAACCTGCTTTCCAACGCCATCCGCTATACCCCGCGAGGGCGCGTG
CTGCTGGGTTGCCGCCGGCATCGGCAGCGCCTGTCGATCGAGGTCTGGGACACCGGGGTGGGCATCGCCGCC
GACAAGCTCGGCGAGATTTTCCAGGAATTCAAGCGCGGCGAGTCACAGCGCTGTCACCAGGACCGCGGGCTC
GGCCTGGGATTGGCGATCGTCGACAAGATCGCCCGCATGCTCGGCCACCGGGTCCGGGTCGGCTCGCTGCCG
GGCAAGGGCTCATGCTTCGCCATCGAGGTACCGCTGGCCCGCCATGCCCCGCGCAGTCGCGCCGAGCCGCTG
GCCAGCGCGGACGACCTGCGCGAGCGCCTGCGTGGTTCGCGGGTGTGGGTGCTGGACAACGATGCGGCGATC
TGCGCCGGCATGCGCACGTTGCTCGAAGCCTGGGGCTGCCGGGTAGTGACGGCGCTGTCGGAGGAAGACCTG
GCGCGACAGGTCGACAACTACCATGCCGAGGCCGACCTGCTGATCGTCGACTATCACCTCGACGACCAGCGC
AACGGCGTCGACGCGGTTGCCGCGATCAACGCCCGGCGCGGCTCGCCGCTGCCGGCGCTGATGATCACCGCC
AACTACAGCAACGAGCTCAAGCAGCAGGTCCGCGAGCTTGGCCATACCCTGATGCACAAGCCGGTGCGGCCG
ATGAAGCTGAAGACCGCGCTCTGCCACTTGCTGGAGCGCGAAGCCTCGGTCTGA |
Translation:
MACISTRPSPGSPLADPVEVSVAELQARVVALEEERHKLQRINQALIGRIESSAAQSDEAYGAFQYSVVLAE
QVRERTDALSQTMLELKASNQLLSDARLRAETAHQHLLDAIESISDAFVLFDPQQRIVLFNERFRALWVDSR
ARIGPGMRRAELHRLARSGGLIVEEQRGGDQQTLYRLRDERWLRMSERPTRDGGLAVLYSDVTEIKLSETAR
REQALAQKSHLLQRAVDNLSQGVAMVGADGVLELWNRRFLELCGLAPIAGHRAFAEVMAESELPLLTPRSQD
SQGSPLSAREQRLFDGRVLEIRTHALPTGGFVNTFTDITERYRHAEALRASERWIRLITDQVPALIAYLSDE
LVYEFTNKVYEEWYRWPSGSMLGRCLRDVHGAEHCRRLEPYFERALAGESVTFEIAETALSGEERYMQRSYV
PNRQADGRVAGLFVLIRDITERRRTAEALHQAYQNLEQRVRERTAELTTLNDQFKREIHERSQVEARLREAK
REAEQANLSKTKFLAAVSHDLLQPLNAARLFTSALQERGSATRDNEALVNNISHSLEDVENLLGTLVDISKL
DAGVITPDIAPFELGELLGNLAAEYRQVAASEGLRLDFVACGALVRSDQQLLARILRNLLSNAIRYTPRGRV
LLGCRRHRQRLSIEVWDTGVGIAADKLGEIFQEFKRGESQRCHQDRGLGLGLAIVDKIARMLGHRVRVGSLP
GKGSCFAIEVPLARHAPRSRAEPLASADDLRERLRGSRVWVLDNDAAICAGMRTLLEAWGCRVVTALSEEDL
ARQVDNYHAEADLLIVDYHLDDQRNGVDAVAAINARRGSPLPALMITANYSNELKQQVRELGHTLMHKPVRP
MKLKTALCHLLEREASV* |
AnnotationID:150 | GeneID:140 |
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Modification Date/Time: |
2005-03-02 16:04:59 |
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GeneProduct: | putative sensor histidine kinase protein |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (28) Two-component regulatory systems |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAN68272.1|AE016461_8 (AE016784) sensory box histidine kinase/response regulator
[Pseudomonas putida KT2440]
Length = 655
Score = 782 bits (2019), Expect = 0.0
Identities = 409/550 (74%), Positives = 459/550 (83%), Gaps = 4/550 (0%)
>dbj|BAC46464.1| (AP005939) two-component hybrid sensor and regulator [Bradyrhizobium
japonicum USDA 110]
Length = 1169
Score = 322 bits (825), Expect = 7e-87
Identities = 199/477 (41%), Positives = 281/477 (58%), Gaps = 31/477 (6%)
>gb|AAN55770.1|AE015713_3 (AE015713) sensor histidine kinase/response regulator [Shewanella
oneidensis MR-1]
Length = 1145
Score = 315 bits (806), Expect = 1e-84
Identities = 180/444 (40%), Positives = 258/444 (58%), Gaps = 20/444 (4%) |
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Structural Features: | COG0642, BaeS, Signal transduction histidine kinase
[Signal transduction mechanisms]
CD-Length = 336 residues, 98.5% aligned
Score = 140 bits (352), Expect = 7e-34
Identities = 89/337 (26%), Positives = 137/337 (40%), Gaps = 8/337 (2%) |
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